FFCP PHASE1:Hg19::chr17:7984113..7984128,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:7984113..7984128,- | |||
|description=CAGE_peak_at_chr17:7984113..7984128,- | |description=CAGE_peak_at_chr17:7984113..7984128,- | ||
|id=chr17:7984113..7984128,- | |id=chr17:7984113..7984128,- | ||
|ontology_enrichment_celltype=CL:0000039!4.41e-16!7;CL:0000586!4.41e-16!7;CL:0000066!2.76e-13!254;CL:0002076!1.85e-10!43;CL:0000076!5.26e-09!62;CL:0002178!6.91e-09!3;CL:0002251!5.74e-08!21;CL:0002322!1.82e-07!5 | |ontology_enrichment_celltype=CL:0000039!4.41e-16!7;CL:0000586!4.41e-16!7;CL:0000066!2.76e-13!254;CL:0002076!1.85e-10!43;CL:0000076!5.26e-09!62;CL:0002178!6.91e-09!3;CL:0002251!5.74e-08!21;CL:0002322!1.82e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002178;3.75e-24;3!CL:0000575;3.76e-16;2!CL:0002251;1.55e-09;20!CL:0002252;6.21e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.09e-24,3;CL:0000575,3.49e-16,2;CL:0002251,1.37e-09,20;CL:0002252,7.27e-09,1;CL:0000066,1.62e-08,253;CL:0000076,1.96e-08,63;CL:0002076,3.24e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.42e-16;2!UBERON:0010056;1.42e-16;2 | |||
|ontology_enrichment_disease=DOID:305!3.14e-10!106;DOID:0050687!3.84e-10!143;DOID:1749!1.36e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.58e-08,106;DOID:0050687,5.03e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.80e-10!169;UBERON:0000925!1.80e-10!169;UBERON:0006595!1.80e-10!169;UBERON:0000065!1.63e-08!53;UBERON:0001723!2.45e-08!3;UBERON:0001033!2.45e-08!3;UBERON:0010056!2.45e-08!3;UBERON:0001042!4.48e-08!10;UBERON:0009145!4.48e-08!10;UBERON:0001004!8.32e-08!72;UBERON:0001007!1.30e-07!155;UBERON:0001555!1.30e-07!155;UBERON:0007026!1.30e-07!155;UBERON:0006562!2.87e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;9.78e-15;5!UBERON:0010039;9.78e-15;5!UBERON:0001723;2.32e-11;3!UBERON:0001033;2.32e-11;3!UBERON:0002372;1.74e-09;1!UBERON:0001961;1.74e-09;1!UBERON:0001744;1.74e-09;1!UBERON:0001042;1.74e-09;1!UBERON:0001735;1.74e-09;1!UBERON:0001041;4.25e-09;14!UBERON:0007029;6.21e-09;1!UBERON:0000964;1.57e-08;4!UBERON:0010409;1.57e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.26e-11,3;UBERON:0001033,2.26e-11,3;UBERON:0010056,2.26e-11,3;UBERON:0000945,1.70e-09,8;UBERON:0010039,1.70e-09,8;UBERON:0002372,1.74e-09,1;UBERON:0001961,1.74e-09,1;UBERON:0001744,1.74e-09,1;UBERON:0001735,1.74e-09,1;UBERON:0007029,4.91e-09,1;UBERON:0001041,6.68e-09,87;UBERON:0000964,1.52e-08,4;UBERON:0010409,1.52e-08,4;UBERON:0004348,1.52e-08,4;UBERON:0005427,1.52e-08,4;UBERON:0001042,1.17e-07,10;UBERON:0009145,1.17e-07,10;UBERON:0006562,5.31e-07,11 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.09288586487763,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0.69716365721711,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,2.24803506515239,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.192190067365106,0.255225424989168,1.51736671283325,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,1.43789361835723,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54581522651905,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,3.4584585658209,0.269272933229316,10.4301477045128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,1.05226393590145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0,0,0,0,1.36885967914362,0.480952921509202,0,1.79828648623917,2.73771792592801,0,0,0.288109595976299,0.372757606696298,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,0,0,0.231522474323834,0,0,1.54400723580486,0,0.176689145945881,1.15748422962549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21722867754722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917142992608395,1.38630799380406,0,0,0,0,0.20170506870352,0,0,0,0.443568258651136,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,4.61306097991642,0.853425474875886,0,0,0,1.45713297917742,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.801652215796681,0.459474497674225,0.250707539292375,0,0,0,0,0.426467963801962,0,0.129177819672012,0.0620747142958579,0,0,0,3.26575121845442,0.342233301085281,5.18610808212324,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr17:7984113..7984128,- | |short_description=p@chr17:7984113..7984128,- | ||
}} | }} |
Latest revision as of 22:53, 25 July 2015
Short description: | p@chr17:7984113..7984128, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7984113..7984128, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.09e-24 | 3 |
corneal epithelial cell | 3.49e-16 | 2 |
epithelial cell of alimentary canal | 1.37e-09 | 20 |
epithelial cell of esophagus | 7.27e-09 | 1 |
epithelial cell | 1.62e-08 | 253 |
squamous epithelial cell | 1.96e-08 | 63 |
endo-epithelial cell | 3.24e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.26e-11 | 3 |
gustatory system | 2.26e-11 | 3 |
future tongue | 2.26e-11 | 3 |
stomach | 1.70e-09 | 8 |
food storage organ | 1.70e-09 | 8 |
tonsil | 1.74e-09 | 1 |
mucosa-associated lymphoid tissue | 1.74e-09 | 1 |
lymphoid tissue | 1.74e-09 | 1 |
tonsillar ring | 1.74e-09 | 1 |
surface | 4.91e-09 | 1 |
foregut | 6.68e-09 | 87 |
cornea | 1.52e-08 | 4 |
eye surface | 1.52e-08 | 4 |
optic eminence | 1.52e-08 | 4 |
corneal primordium | 1.52e-08 | 4 |
chordate pharynx | 1.17e-07 | 10 |
pharyngeal region of foregut | 1.17e-07 | 10 |
pharynx | 5.31e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.58e-08 | 106 |
cell type cancer | 5.03e-08 | 143 |