FFCP PHASE1:Hg19::chr19:50390837..50390847,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:50390837..50390847,+
|short_description=p@chr19:50390837..50390847,+
|description=CAGE_peak_at_chr19:50390837..50390847,+
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:50390837..50390847,+ | |||
|description=CAGE_peak_at_chr19:50390837..50390847,+ | |||
|id=chr19:50390837..50390847,+ | |||
|ontology_enrichment_celltype=CL:1000449!1.86e-13!16;CL:0005020!4.23e-12!6;CL:0002138!4.23e-12!6;CL:0005022!4.23e-12!6;CL:1000497!7.57e-12!18;CL:0002518!7.57e-12!18;CL:1000507!1.08e-09!12;CL:1000494!1.08e-09!12;CL:0002681!7.97e-09!13;CL:0002584!7.97e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:0002681;1.23e-29;12!CL:0002584;1.23e-29;12!CL:1000449;7.97e-24;15!CL:0002553;1.19e-23;1!CL:0000167;4.10e-23;1!CL:0000164;4.10e-23;1!CL:0000502;4.10e-23;1!CL:0000172;4.10e-23;1!CL:0000173;4.10e-23;1!CL:1000497;4.36e-21;17!CL:0002518;4.36e-21;17!CL:1000507;1.67e-20;10!CL:1000494;1.67e-20;10!CL:1000746;1.80e-13;7!CL:1000612;1.80e-13;7!CL:0000650;2.90e-12;2!CL:1000500;2.90e-12;2!CL:1000618;2.90e-12;2!CL:1001318;2.90e-12;2!CL:0002173;2.90e-12;2!CL:0002535;2.90e-12;2!CL:0000669;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002681,1.06e-29,12;CL:0002584,1.06e-29,12;CL:1000449,7.08e-24,15;CL:0002553,1.34e-23,1;CL:0000167,6.40e-23,1;CL:0000164,6.40e-23,1;CL:0000502,6.40e-23,1;CL:0000172,6.40e-23,1;CL:0000173,6.40e-23,1;CL:0002351,6.40e-23,1;CL:1000497,3.93e-21,17;CL:0002518,3.93e-21,17;CL:1000507,1.47e-20,10;CL:1000494,1.47e-20,10;CL:1000746,1.58e-13,7;CL:1000612,1.58e-13,7;CL:0000650,2.32e-12,2;CL:1000500,2.32e-12,2;CL:1000618,2.32e-12,2;CL:1001318,2.32e-12,2;CL:0002173,2.32e-12,2;CL:0002535,3.24e-12,2;CL:0000669,8.14e-07,4;CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002351;4.10e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;4.10e-23;1!DOID:4468;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.40e-23,1;DOID:4468,2.59e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!4.96e-15!27;UBERON:0003918!4.96e-15!27;UBERON:0005095!4.96e-15!27;UBERON:0007687!4.96e-15!27;UBERON:0000489!5.79e-15!32;UBERON:0004211!1.86e-13!16;UBERON:0001285!1.86e-13!16;UBERON:0007684!1.86e-13!16;UBERON:0003220!1.86e-13!16;UBERON:0004208!1.86e-13!16;UBERON:0003887!7.73e-13!21;UBERON:0006555!1.32e-12!17;UBERON:0005103!1.32e-12!17;UBERON:0000083!1.32e-12!17;UBERON:0009201!1.32e-12!17;UBERON:0004819!1.32e-12!17;UBERON:0006553!1.32e-12!17;UBERON:0003074!1.32e-12!17;UBERON:0003060!1.32e-12!17;UBERON:0000080!7.57e-12!18;UBERON:0002120!7.57e-12!18;UBERON:0004875!7.57e-12!18;UBERON:0005721!7.57e-12!18;UBERON:0005754!7.57e-12!18;UBERON:0007297!7.57e-12!18;UBERON:0004876!1.47e-10!20;UBERON:0006554!2.86e-10!44;UBERON:0001008!5.42e-10!45;UBERON:0009773!1.08e-09!12;UBERON:0001231!1.08e-09!12;UBERON:0004810!1.08e-09!12;UBERON:0001473!4.30e-09!8;UBERON:0004536!4.30e-09!8;UBERON:0006558!4.30e-09!8;UBERON:0001225!7.97e-09!13;UBERON:0008987!7.97e-09!13;UBERON:0003103!3.72e-08!69;UBERON:0000058!6.90e-08!26;UBERON:0005172!9.24e-08!55;UBERON:0005173!9.24e-08!55;UBERON:0002465!2.78e-07!10;UBERON:0005177!4.06e-07!107;UBERON:0001851!4.20e-07!16;UBERON:0002417!8.63e-07!61;UBERON:0000916!8.63e-07!61;UBERON:0003064!9.70e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0001225;1.23e-29;12!UBERON:0008987;1.23e-29;12!UBERON:0001851;7.97e-24;15!UBERON:0006555;7.97e-24;15!UBERON:0000353;7.97e-24;15!UBERON:0004819;7.97e-24;15!UBERON:0001285;7.97e-24;15!UBERON:0007684;7.97e-24;15!UBERON:0004211;1.67e-20;10!UBERON:0009773;1.67e-20;10!UBERON:0001231;1.67e-20;10!UBERON:0004810;1.67e-20;10!UBERON:0002113;4.42e-15;24!UBERON:0011143;4.42e-15;24!UBERON:0000074;1.80e-13;7!UBERON:0001229;1.80e-13;7!UBERON:0000489;1.48e-12;29!UBERON:0003567;2.90e-12;2!UBERON:0003838;2.90e-12;2!UBERON:0003586;2.90e-12;2!UBERON:0006955;2.90e-12;2!UBERON:0005169;2.90e-12;2!UBERON:0002321;2.90e-12;2!UBERON:0004801;2.90e-12;2!UBERON:0005215;2.90e-12;2!UBERON:0002303;2.90e-12;2!UBERON:0002319;2.90e-12;2!UBERON:0006554;3.75e-12;30!UBERON:0001008;3.75e-12;30!UBERON:0003891;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,1.06e-29,12;UBERON:0008987,1.06e-29,12;UBERON:0001851,7.08e-24,15;UBERON:0004211,7.08e-24,15;UBERON:0009773,7.08e-24,15;UBERON:0000353,7.08e-24,15;UBERON:0001231,7.08e-24,15;UBERON:0001285,7.08e-24,15;UBERON:0007684,7.08e-24,15;UBERON:0004208,7.08e-24,15;UBERON:0006555,2.03e-22,16;UBERON:0004819,2.03e-22,16;UBERON:0004810,1.47e-20,10;UBERON:0002113,5.51e-14,26;UBERON:0003918,5.51e-14,26;UBERON:0011143,5.51e-14,26;UBERON:0005095,5.51e-14,26;UBERON:0007687,5.51e-14,26;UBERON:0010532,1.58e-13,7;UBERON:0000074,1.58e-13,7;UBERON:0001229,1.58e-13,7;UBERON:0001230,1.58e-13,7;UBERON:0003220,1.58e-13,7;UBERON:0005749,1.58e-13,7;UBERON:0004199,1.58e-13,7;UBERON:0004209,1.58e-13,7;UBERON:0004198,1.58e-13,7;UBERON:0003567,2.32e-12,2;UBERON:0003838,2.32e-12,2;UBERON:0003586,2.32e-12,2;UBERON:0005169,2.32e-12,2;UBERON:0002321,2.32e-12,2;UBERON:0005215,2.32e-12,2;UBERON:0002303,2.32e-12,2;UBERON:0002319,2.32e-12,2;UBERON:0006955,3.24e-12,2;UBERON:0004801,3.24e-12,2;UBERON:0005103,5.83e-12,8;UBERON:0000083,5.83e-12,8;UBERON:0009201,5.83e-12,8;UBERON:0006553,5.83e-12,8;UBERON:0003074,5.83e-12,8;UBERON:0003060,5.83e-12,8;UBERON:0000489,8.48e-12,31;UBERON:0000080,9.69e-11,9;UBERON:0002120,9.69e-11,9;UBERON:0004875,9.69e-11,9;UBERON:0005721,9.69e-11,9;UBERON:0005754,9.69e-11,9;UBERON:0007297,9.69e-11,9;UBERON:0004876,5.87e-09,11;UBERON:0003887,2.75e-08,12;UBERON:0006554,6.63e-08,47;UBERON:0001008,9.55e-08,48;UBERON:0005172,6.41e-07,54;UBERON:0005173,6.41e-07,54;UBERON:0003891,8.14e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25599806453706,2.0794141018192,0.784349769176855,0,0.527758144464379,0,0,0.215915916102139,0,0,1.50506932156456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.294450700845729,0,0,0,0,0,0,3.97901550322736,0,0,0,0.150962843566674,0,0.218559560503957,0.470317296361523,0,1.17838273550813,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25599806453706,2.0794141018192,0.784349769176855,0,0.527758144464379,0,0,0.215915916102139,0,0,1.50506932156456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.294450700845729,0,0,0,0,0,0,3.97901550322736,0,0,0,0.150962843566674,0,0.218559560503957,0.470317296361523,0,1.17838273550813,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr19:50390837..50390847,+ | |||
}} | }} |
Latest revision as of 16:17, 27 July 2015
Short description: | p@chr19:50390837..50390847, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50390837..50390847, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 1.06e-29 | 12 |
renal cortical epithelial cell | 1.06e-29 | 12 |
epithelial cell of nephron | 7.08e-24 | 15 |
lung fibroblast | 1.34e-23 | 1 |
peptide hormone secreting cell | 6.40e-23 | 1 |
enteroendocrine cell | 6.40e-23 | 1 |
type D enteroendocrine cell | 6.40e-23 | 1 |
somatostatin secreting cell | 6.40e-23 | 1 |
pancreatic D cell | 6.40e-23 | 1 |
progenitor cell of endocrine pancreas | 6.40e-23 | 1 |
kidney cell | 3.93e-21 | 17 |
kidney epithelial cell | 3.93e-21 | 17 |
kidney tubule cell | 1.47e-20 | 10 |
nephron tubule epithelial cell | 1.47e-20 | 10 |
glomerular cell | 1.58e-13 | 7 |
kidney corpuscule cell | 1.58e-13 | 7 |
mesangial cell | 2.32e-12 | 2 |
kidney interstitial cell | 2.32e-12 | 2 |
juxtaglomerular complex cell | 2.32e-12 | 2 |
renal interstitial pericyte | 2.32e-12 | 2 |
extraglomerular mesangial cell | 2.32e-12 | 2 |
epithelial cell of cervix | 3.24e-12 | 2 |
pericyte cell | 8.14e-07 | 4 |
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.40e-23 | 1 |
clear cell adenocarcinoma | 2.59e-12 | 2 |