FFCP PHASE1:Hg19::chr1:110438789..110438831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=194bp_to_BC015716_5end | |association_with_transcript=194bp_to_BC015716_5end | ||
|cluster_id=chr1:110438789..110438831,+ | |||
|coexpression_cluster_id=C3456 | |||
|description=CAGE_peak_1_at_BC015716_5end | |description=CAGE_peak_1_at_BC015716_5end | ||
|id=chr1:110438789..110438831,+ | |id=chr1:110438789..110438831,+ | ||
|ontology_enrichment_celltype=CL:0000766!9.06e-70!76;CL:0002057!1.16e-64!42;CL:0000860!1.31e-59!45;CL:0000557!5.41e-53!71;CL:0000763!8.22e-53!112;CL:0000049!8.22e-53!112;CL:0000839!2.43e-51!70;CL:0000738!2.06e-44!140;CL:0002009!3.45e-44!65;CL:0002194!1.91e-43!63;CL:0000576!1.91e-43!63;CL:0000040!1.91e-43!63;CL:0000559!1.91e-43!63;CL:0000037!4.98e-39!172;CL:0000566!4.98e-39!172;CL:0002032!1.25e-36!165;CL:0000837!1.25e-36!165;CL:0000988!5.67e-36!182;CL:0002031!7.67e-31!124;CL:0002087!2.60e-27!119;CL:0000094!4.68e-20!8;CL:0000134!2.81e-14!358;CL:0000081!4.14e-14!11;CL:0002320!1.11e-13!365;CL:0002274!3.60e-13!5;CL:0000457!3.60e-13!5;CL:0002191!3.60e-13!5;CL:0000097!3.60e-13!5;CL:0000831!3.60e-13!5;CL:0002028!3.60e-13!5;CL:0000219!1.39e-11!390;CL:0000048!2.84e-10!430;CL:0000723!6.72e-10!436;CL:0000224!1.48e-09!4;CL:0000034!2.03e-09!444;CL:0002393!5.27e-09!9;CL:0002397!5.27e-09!9;CL:0000767!7.95e-09!3;CL:0000775!4.39e-08!3;CL:0000842!2.22e-07!3;CL:0000163!4.51e-07!9 | |ontology_enrichment_celltype=CL:0000766!9.06e-70!76;CL:0002057!1.16e-64!42;CL:0000860!1.31e-59!45;CL:0000557!5.41e-53!71;CL:0000763!8.22e-53!112;CL:0000049!8.22e-53!112;CL:0000839!2.43e-51!70;CL:0000738!2.06e-44!140;CL:0002009!3.45e-44!65;CL:0002194!1.91e-43!63;CL:0000576!1.91e-43!63;CL:0000040!1.91e-43!63;CL:0000559!1.91e-43!63;CL:0000037!4.98e-39!172;CL:0000566!4.98e-39!172;CL:0002032!1.25e-36!165;CL:0000837!1.25e-36!165;CL:0000988!5.67e-36!182;CL:0002031!7.67e-31!124;CL:0002087!2.60e-27!119;CL:0000094!4.68e-20!8;CL:0000134!2.81e-14!358;CL:0000081!4.14e-14!11;CL:0002320!1.11e-13!365;CL:0002274!3.60e-13!5;CL:0000457!3.60e-13!5;CL:0002191!3.60e-13!5;CL:0000097!3.60e-13!5;CL:0000831!3.60e-13!5;CL:0002028!3.60e-13!5;CL:0000219!1.39e-11!390;CL:0000048!2.84e-10!430;CL:0000723!6.72e-10!436;CL:0000224!1.48e-09!4;CL:0000034!2.03e-09!444;CL:0002393!5.27e-09!9;CL:0002397!5.27e-09!9;CL:0000767!7.95e-09!3;CL:0000775!4.39e-08!3;CL:0000842!2.22e-07!3;CL:0000163!4.51e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000094;9.35e-35;8!CL:0000766;8.67e-30;69!CL:0000860;1.46e-27;33!CL:0002057;1.46e-27;33!CL:0000081;4.79e-25;11!CL:0000473;2.19e-20;39!CL:0000234;2.19e-20;39!CL:0000576;3.08e-20;48!CL:0000097;3.89e-19;5!CL:0000767;2.37e-18;3!CL:0002393;9.06e-15;6!CL:0002397;9.06e-15;6!CL:0000771;4.39e-13;2!CL:0000163;1.10e-10;9!CL:0000763;2.41e-10;100!CL:0000775;2.85e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.86e-59,72;CL:0000763,2.24e-40,108;CL:0000049,2.24e-40,108;CL:0000860,2.87e-38,42;CL:0002057,2.87e-38,42;CL:0000839,2.65e-35,66;CL:0000094,9.37e-35,8;CL:0000557,1.03e-34,67;CL:0000473,5.29e-33,48;CL:0000234,5.29e-33,48;CL:0000738,5.82e-31,136;CL:0000037,7.15e-26,168;CL:0002194,1.25e-25,59;CL:0000576,1.25e-25,59;CL:0000040,1.25e-25,59;CL:0000559,1.25e-25,59;CL:0002032,3.07e-25,161;CL:0000837,3.07e-25,161;CL:0000081,4.80e-25,11;CL:0002009,1.11e-24,61;CL:0000988,2.93e-24,177;CL:0000097,3.81e-19,5;CL:0002028,3.81e-19,5;CL:0000767,2.31e-18,3;CL:0002031,1.91e-17,120;CL:0000771,4.66e-13,2;CL:0002087,6.21e-13,115;CL:0000163,1.09e-10,9;CL:0002393,8.56e-10,9;CL:0002397,8.56e-10,9;CL:0000134,4.22e-09,354;CL:0002320,8.34e-09,361;CL:0000775,2.80e-08,3;CL:0000219,9.22e-08,386;CL:0000048,3.29e-07,427;CL:0000723,5.07e-07,433;CL:0000034,8.88e-07,441;CL:0000228,9.51e-07,1;CL:0002372,9.51e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-31;42!CL:0000049;1.19e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.56e-54!102;UBERON:0003061!4.56e-54!102;UBERON:0002193!6.79e-50!112;UBERON:0002371!1.20e-45!80;UBERON:0001474!1.33e-41!86;UBERON:0002405!1.18e-35!115;UBERON:0004765!1.38e-33!101;UBERON:0001434!1.38e-33!101;UBERON:0003081!8.87e-19!216;UBERON:0002204!1.33e-16!167;UBERON:0002384!7.26e-13!375;UBERON:0000178!1.81e-11!15;UBERON:0000179!1.81e-11!15;UBERON:0000463!1.81e-11!15 | |ontology_enrichment_uberon=UBERON:0002390!4.56e-54!102;UBERON:0003061!4.56e-54!102;UBERON:0002193!6.79e-50!112;UBERON:0002371!1.20e-45!80;UBERON:0001474!1.33e-41!86;UBERON:0002405!1.18e-35!115;UBERON:0004765!1.38e-33!101;UBERON:0001434!1.38e-33!101;UBERON:0003081!8.87e-19!216;UBERON:0002204!1.33e-16!167;UBERON:0002384!7.26e-13!375;UBERON:0000178!1.81e-11!15;UBERON:0000179!1.81e-11!15;UBERON:0000463!1.81e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.88e-09;15!UBERON:0000179;2.88e-09;15!UBERON:0000463;2.88e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.66e-35,98;UBERON:0003061,1.66e-35,98;UBERON:0002193,9.64e-32,108;UBERON:0002371,4.17e-30,76;UBERON:0001474,1.37e-27,82;UBERON:0004765,9.49e-25,90;UBERON:0002405,8.28e-24,93;UBERON:0001434,7.85e-22,100;UBERON:0003081,2.29e-14,203;UBERON:0002204,1.55e-12,167;UBERON:0000178,2.48e-09,15;UBERON:0000179,2.48e-09,15;UBERON:0000463,2.48e-09,15;UBERON:0002384,2.11e-08,371;UBERON:0000926,4.06e-08,315;UBERON:0004120,4.06e-08,315;UBERON:0006603,4.06e-08,315 | |||
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|short_description=p1@BC015716 | |short_description=p1@BC015716 | ||
}} | }} |
Latest revision as of 19:26, 27 July 2015
Short description: | p1@BC015716 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC015716_5end |
Coexpression cluster: | C3456_Basophils_Eosinophils_Mast_CD14_CD34_Natural_CD8 |
Association with transcript: | 194bp_to_BC015716_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.66e-35 | 98 |
blood island | 1.66e-35 | 98 |
hemolymphoid system | 9.64e-32 | 108 |
bone marrow | 4.17e-30 | 76 |
bone element | 1.37e-27 | 82 |
skeletal element | 9.49e-25 | 90 |
immune system | 8.28e-24 | 93 |
skeletal system | 7.85e-22 | 100 |
lateral plate mesoderm | 2.29e-14 | 203 |
musculoskeletal system | 1.55e-12 | 167 |
blood | 2.48e-09 | 15 |
haemolymphatic fluid | 2.48e-09 | 15 |
organism substance | 2.48e-09 | 15 |
connective tissue | 2.11e-08 | 371 |
mesoderm | 4.06e-08 | 315 |
mesoderm-derived structure | 4.06e-08 | 315 |
presumptive mesoderm | 4.06e-08 | 315 |