FFCP PHASE1:Hg19::chr1:153533849..153533860,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153533849..153533860,-
|short_description=p@chr1:153533849..153533860,-
|description=CAGE_peak_at_chr1:153533849..153533860,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:153533849..153533860,- | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_at_chr1:153533849..153533860,- | |||
|id=chr1:153533849..153533860,- | |||
|ontology_enrichment_celltype=CL:0002621!8.11e-18!3;CL:0002076!2.43e-13!43;CL:0002251!4.76e-12!21;CL:0000066!1.05e-10!254;CL:0002159!3.34e-10!13;CL:0000223!3.84e-09!59;CL:0000240!9.59e-09!6;CL:0000311!9.59e-09!6;CL:0000079!9.59e-09!6;CL:0000237!9.59e-09!6;CL:0000036!9.59e-09!6;CL:0000357!9.59e-09!6;CL:0000114!9.59e-09!6;CL:0002166!5.64e-08!3;CL:0002368!6.85e-07!13;CL:0002336!7.60e-07!1;CL:0002261!7.60e-07!1;CL:0002170!7.60e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.01e-74;3!CL:0002252;6.72e-26;1!CL:0002251;2.60e-20;20!CL:0002076;6.84e-15;42!CL:0000575;1.46e-13;2!CL:0000307;1.74e-09;3!CL:0002159;4.57e-08;14!CL:0000244;1.75e-07;4!CL:0000731;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.01e-74,3;CL:0002252,5.93e-26,1;CL:0002251,2.54e-20,20;CL:0002076,5.11e-15,42;CL:0000575,1.55e-13,2;CL:0000223,5.99e-11,58;CL:0000068,1.67e-09,3;CL:0000069,1.67e-09,3;CL:0000307,1.67e-09,3;CL:0000377,1.67e-09,3;CL:0002159,4.66e-08,14;CL:0000244,1.80e-07,4;CL:0000731,1.80e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.74e-09;3!CL:0000223;8.13e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!8.88e-13!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!8.11e-18!3;UBERON:0000365!1.84e-10!5;UBERON:0005910!8.63e-09!6;UBERON:0000166!9.23e-09!21;UBERON:0000165!1.26e-08!28;UBERON:0000930!1.26e-08!28;UBERON:0000161!1.30e-08!35;UBERON:0001004!2.11e-08!72;UBERON:0000002!2.78e-08!6;UBERON:0001560!2.78e-08!6;UBERON:0004119!2.85e-08!169;UBERON:0000925!2.85e-08!169;UBERON:0006595!2.85e-08!169;UBERON:0000344!4.18e-07!12;UBERON:0001828!5.99e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.01e-74;3!UBERON:0000486;1.95e-33;12!UBERON:0003929;1.35e-32;7!UBERON:0003350;1.23e-28;8!UBERON:0001828;1.23e-28;8!UBERON:0003729;6.07e-18;13!UBERON:0010371;8.84e-14;31!UBERON:0000161;1.64e-12;19!UBERON:0000166;1.64e-12;19!UBERON:0000344;6.38e-12;20!UBERON:0004807;6.70e-11;22!UBERON:0005911;1.55e-10;36!UBERON:0001043;1.47e-09;3!UBERON:0000165;1.05e-08;28!UBERON:0000964;1.98e-07;4!UBERON:0010409;1.98e-07;4!UBERON:0001555;3.94e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.01e-74,3;UBERON:0003350,1.23e-28,8;UBERON:0001828,1.23e-28,8;UBERON:0003729,6.07e-18,13;UBERON:0000344,6.38e-12,20;UBERON:0000166,6.70e-11,22;UBERON:0001043,1.41e-09,3;UBERON:0009143,1.41e-09,3;UBERON:0004807,1.05e-08,28;UBERON:0001444,1.54e-08,49;UBERON:0000165,2.00e-08,29;UBERON:0000930,2.00e-08,29;UBERON:0000033,1.62e-07,56;UBERON:0000964,2.04e-07,4;UBERON:0010409,2.04e-07,4;UBERON:0004348,2.04e-07,4;UBERON:0005427,2.04e-07,4;UBERON:0000161,6.66e-07,36;UBERON:0000153,8.00e-07,62;UBERON:0007811,8.00e-07,62 | |||
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|short_description=p@chr1:153533849..153533860,- | |||
}} | }} |
Latest revision as of 21:44, 27 July 2015
Short description: | p@chr1:153533849..153533860, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153533849..153533860, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.01e-74 | 3 |
epithelial cell of esophagus | 5.93e-26 | 1 |
epithelial cell of alimentary canal | 2.54e-20 | 20 |
endo-epithelial cell | 5.11e-15 | 42 |
corneal epithelial cell | 1.55e-13 | 2 |
endodermal cell | 5.99e-11 | 58 |
duct epithelial cell | 1.67e-09 | 3 |
branched duct epithelial cell | 1.67e-09 | 3 |
tracheal epithelial cell | 1.67e-09 | 3 |
tracheoblast | 1.67e-09 | 3 |
general ecto-epithelial cell | 4.66e-08 | 14 |
transitional epithelial cell | 1.80e-07 | 4 |
urothelial cell | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.01e-74 | 3 |
epithelium of mucosa | 1.23e-28 | 8 |
gingiva | 1.23e-28 | 8 |
mouth mucosa | 6.07e-18 | 13 |
mucosa | 6.38e-12 | 20 |
oral opening | 6.70e-11 | 22 |
esophagus | 1.41e-09 | 3 |
esophageal region | 1.41e-09 | 3 |
respiratory system epithelium | 1.05e-08 | 28 |
subdivision of head | 1.54e-08 | 49 |
mouth | 2.00e-08 | 29 |
stomodeum | 2.00e-08 | 29 |
head | 1.62e-07 | 56 |
cornea | 2.04e-07 | 4 |
eye surface | 2.04e-07 | 4 |
optic eminence | 2.04e-07 | 4 |
corneal primordium | 2.04e-07 | 4 |
orifice | 6.66e-07 | 36 |
anterior region of body | 8.00e-07 | 62 |
craniocervical region | 8.00e-07 | 62 |