FFCP PHASE1:Hg19::chr1:22213979..22214020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22213979..22214020,- | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22213979..22214020,- | |description=CAGE_peak_at_chr1:22213979..22214020,- | ||
|id=chr1:22213979..22214020,- | |id=chr1:22213979..22214020,- | ||
|ontology_enrichment_celltype=CL:0000222!1.15e-17!119;CL:0002078!9.74e-17!44;CL:0002139!1.14e-16!24;CL:0000115!3.33e-16!35;CL:0000213!4.17e-14!57;CL:0000215!4.17e-14!57;CL:0000071!8.19e-13!18;CL:0002546!8.19e-13!18;CL:0000220!4.51e-10!246;CL:0002321!7.69e-10!248;CL:0000055!2.20e-08!180;CL:0000057!7.83e-08!75;CL:1000413!1.27e-07!9 | |ontology_enrichment_celltype=CL:0000222!1.15e-17!119;CL:0002078!9.74e-17!44;CL:0002139!1.14e-16!24;CL:0000115!3.33e-16!35;CL:0000213!4.17e-14!57;CL:0000215!4.17e-14!57;CL:0000071!8.19e-13!18;CL:0002546!8.19e-13!18;CL:0000220!4.51e-10!246;CL:0002321!7.69e-10!248;CL:0000055!2.20e-08!180;CL:0000057!7.83e-08!75;CL:1000413!1.27e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.64e-30;24!CL:0000115;7.99e-27;36!CL:0000071;1.14e-22;18!CL:0002078;2.88e-20;45!CL:0000213;1.26e-14;58!CL:0000215;1.26e-14;58!CL:1000413;8.79e-13;9!CL:0002138;1.04e-08;6!CL:0002544;1.28e-08;6!CL:0002543;2.26e-08;6!CL:0002188;8.91e-08;5!CL:1000746;4.31e-07;7!CL:1000612;4.31e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.36e-32,36;CL:0002078,9.39e-31,45;CL:0002139,5.40e-30,24;CL:0000213,1.35e-24,58;CL:0000215,1.35e-24,58;CL:0000071,1.02e-22,18;CL:0002546,1.02e-22,18;CL:0000222,3.12e-19,121;CL:1000413,5.83e-13,9;CL:0005020,8.17e-09,6;CL:0002138,8.17e-09,6;CL:0005022,8.17e-09,6;CL:0002544,8.39e-09,6;CL:0002543,2.64e-08,6;CL:0002188,5.64e-08,5;CL:1000746,2.79e-07,7;CL:1000612,2.79e-07,7;CL:0000057,7.45e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;1.14e-22;18!CL:0005022;1.04e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.22e-25!118;UBERON:0000055!1.75e-24!69;UBERON:0002049!2.51e-23!79;UBERON:0007798!2.51e-23!79;UBERON:0004872!3.62e-23!84;UBERON:0001981!8.37e-22!60;UBERON:0007500!8.37e-22!60;UBERON:0004537!8.37e-22!60;UBERON:0006965!8.37e-22!60;UBERON:0001009!2.43e-17!113;UBERON:0004535!7.95e-17!110;UBERON:0004111!1.72e-14!241;UBERON:0001637!1.53e-13!42;UBERON:0003509!1.53e-13!42;UBERON:0004572!1.53e-13!42;UBERON:0000490!5.86e-13!138;UBERON:0000477!7.29e-13!286;UBERON:0001986!8.19e-13!18;UBERON:0004638!8.19e-13!18;UBERON:0004852!8.19e-13!18;UBERON:0004573!2.09e-11!33;UBERON:0004571!2.09e-11!33;UBERON:0002100!2.31e-11!216;UBERON:0006914!8.23e-11!25;UBERON:0000487!9.79e-11!22;UBERON:0000926!1.54e-10!448;UBERON:0004120!1.54e-10!448;UBERON:0006603!1.54e-10!448;UBERON:0005256!2.19e-10!143;UBERON:0003104!4.81e-10!238;UBERON:0009142!4.81e-10!238;UBERON:0000025!1.21e-09!194;UBERON:0000468!1.94e-09!659;UBERON:0009569!1.68e-08!113;UBERON:0002417!1.69e-08!61;UBERON:0000916!1.69e-08!61;UBERON:0000483!1.09e-07!309;UBERON:0000467!1.25e-07!625;UBERON:0003915!1.27e-07!9;UBERON:0004700!1.27e-07!9;UBERON:0001917!1.27e-07!9;UBERON:0000119!1.40e-07!312;UBERON:0000947!1.43e-07!21;UBERON:0010191!1.43e-07!21;UBERON:0000480!1.77e-07!626;UBERON:0003103!2.62e-07!69 | |ontology_enrichment_uberon=UBERON:0003914!6.22e-25!118;UBERON:0000055!1.75e-24!69;UBERON:0002049!2.51e-23!79;UBERON:0007798!2.51e-23!79;UBERON:0004872!3.62e-23!84;UBERON:0001981!8.37e-22!60;UBERON:0007500!8.37e-22!60;UBERON:0004537!8.37e-22!60;UBERON:0006965!8.37e-22!60;UBERON:0001009!2.43e-17!113;UBERON:0004535!7.95e-17!110;UBERON:0004111!1.72e-14!241;UBERON:0001637!1.53e-13!42;UBERON:0003509!1.53e-13!42;UBERON:0004572!1.53e-13!42;UBERON:0000490!5.86e-13!138;UBERON:0000477!7.29e-13!286;UBERON:0001986!8.19e-13!18;UBERON:0004638!8.19e-13!18;UBERON:0004852!8.19e-13!18;UBERON:0004573!2.09e-11!33;UBERON:0004571!2.09e-11!33;UBERON:0002100!2.31e-11!216;UBERON:0006914!8.23e-11!25;UBERON:0000487!9.79e-11!22;UBERON:0000926!1.54e-10!448;UBERON:0004120!1.54e-10!448;UBERON:0006603!1.54e-10!448;UBERON:0005256!2.19e-10!143;UBERON:0003104!4.81e-10!238;UBERON:0009142!4.81e-10!238;UBERON:0000025!1.21e-09!194;UBERON:0000468!1.94e-09!659;UBERON:0009569!1.68e-08!113;UBERON:0002417!1.69e-08!61;UBERON:0000916!1.69e-08!61;UBERON:0000483!1.09e-07!309;UBERON:0000467!1.25e-07!625;UBERON:0003915!1.27e-07!9;UBERON:0004700!1.27e-07!9;UBERON:0001917!1.27e-07!9;UBERON:0000119!1.40e-07!312;UBERON:0000947!1.43e-07!21;UBERON:0010191!1.43e-07!21;UBERON:0000480!1.77e-07!626;UBERON:0003103!2.62e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.14e-22;18!UBERON:0001986;1.14e-22;18!UBERON:0004852;1.14e-22;18!UBERON:0006914;5.98e-20;25!UBERON:0000487;2.82e-19;22!UBERON:0000055;1.39e-16;65!UBERON:0001637;1.34e-14;42!UBERON:0003509;1.34e-14;42!UBERON:0004572;1.34e-14;42!UBERON:0007500;4.18e-14;56!UBERON:0001981;4.18e-14;56!UBERON:0004537;4.18e-14;56!UBERON:0004573;3.89e-13;33!UBERON:0004571;3.89e-13;33!UBERON:0003915;8.79e-13;9!UBERON:0004700;8.79e-13;9!UBERON:0001917;8.79e-13;9!UBERON:0003914;1.43e-12;74!UBERON:0002049;9.89e-12;75!UBERON:0007798;9.89e-12;75!UBERON:0000490;2.74e-11;33!UBERON:0001009;1.36e-08;112!UBERON:0000947;1.45e-08;21!UBERON:0010191;1.45e-08;21!UBERON:0004535;2.15e-08;109!UBERON:0001473;2.45e-08;8!UBERON:0004536;2.45e-08;8!UBERON:0006558;2.45e-08;8!UBERON:0004457;3.71e-08;9!UBERON:0000042;3.71e-08;9!UBERON:0003513;5.24e-08;7!UBERON:0003688;1.30e-07;6!UBERON:0002358;1.30e-07;6!UBERON:0003684;1.30e-07;6!UBERON:0001178;1.30e-07;6!UBERON:0000025;2.35e-07;93!UBERON:0000074;4.31e-07;7!UBERON:0001229;4.31e-07;7!UBERON:0001638;9.84e-07;9!UBERON:0003920;9.84e-07;9!UBERON:0004582;9.84e-07;9 | |||
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| ||
|short_description=p@chr1:22213979..22214020,- | |short_description=p@chr1:22213979..22214020,- | ||
}} | }} |
Latest revision as of 04:12, 28 July 2015
Short description: | p@chr1:22213979..22214020, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22213979..22214020, - |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.36e-32 | 36 |
meso-epithelial cell | 9.39e-31 | 45 |
endothelial cell of vascular tree | 5.40e-30 | 24 |
lining cell | 1.35e-24 | 58 |
barrier cell | 1.35e-24 | 58 |
blood vessel endothelial cell | 1.02e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.02e-22 | 18 |
mesodermal cell | 3.12e-19 | 121 |
endothelial cell of artery | 5.83e-13 | 9 |
lymphangioblast | 8.17e-09 | 6 |
endothelial cell of lymphatic vessel | 8.17e-09 | 6 |
vascular lymphangioblast | 8.17e-09 | 6 |
aortic endothelial cell | 8.39e-09 | 6 |
vein endothelial cell | 2.64e-08 | 6 |
glomerular endothelial cell | 5.64e-08 | 5 |
glomerular cell | 2.79e-07 | 7 |
kidney corpuscule cell | 2.79e-07 | 7 |
fibroblast | 7.45e-07 | 76 |