FFCP PHASE1:Hg19::chr1:22214518..22214534,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22214518..22214534,- | |||
|coexpression_cluster_id=C547 | |||
|description=CAGE_peak_at_chr1:22214518..22214534,- | |description=CAGE_peak_at_chr1:22214518..22214534,- | ||
|id=chr1:22214518..22214534,- | |id=chr1:22214518..22214534,- | ||
|ontology_enrichment_celltype=CL:0000222!2.11e-22!119;CL:0000115!8.12e-18!35;CL:0002078!1.07e-17!44;CL:0002139!2.16e-17!24;CL:0002321!3.77e-16!248;CL:0000220!4.86e-16!246;CL:0000213!1.06e-14!57;CL:0000215!1.06e-14!57;CL:0000071!1.13e-13!18;CL:0002546!1.13e-13!18;CL:0000055!3.43e-12!180;CL:0000057!1.66e-08!75;CL:0000680!1.69e-08!57;CL:0000056!1.69e-08!57;CL:0000355!1.69e-08!57;CL:0000183!2.69e-08!59;CL:1000413!8.32e-08!9;CL:0000187!1.46e-07!54;CL:0000359!8.80e-07!32 | |ontology_enrichment_celltype=CL:0000222!2.11e-22!119;CL:0000115!8.12e-18!35;CL:0002078!1.07e-17!44;CL:0002139!2.16e-17!24;CL:0002321!3.77e-16!248;CL:0000220!4.86e-16!246;CL:0000213!1.06e-14!57;CL:0000215!1.06e-14!57;CL:0000071!1.13e-13!18;CL:0002546!1.13e-13!18;CL:0000055!3.43e-12!180;CL:0000057!1.66e-08!75;CL:0000680!1.69e-08!57;CL:0000056!1.69e-08!57;CL:0000355!1.69e-08!57;CL:0000183!2.69e-08!59;CL:1000413!8.32e-08!9;CL:0000187!1.46e-07!54;CL:0000359!8.80e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.18e-30;24!CL:0000115;3.18e-27;36!CL:0000071;1.45e-23;18!CL:0002078;1.22e-20;45!CL:0000213;4.72e-16;58!CL:0000215;4.72e-16;58!CL:1000413;5.54e-13;9!CL:0002543;4.57e-09;6!CL:0002544;6.20e-09;6!CL:0002138;2.30e-08;6!CL:0002188;6.51e-08;5!CL:1000746;1.83e-07;7!CL:1000612;1.83e-07;7!CL:0002595;2.69e-07;5!CL:0000359;4.87e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.84e-32,36;CL:0002078,7.52e-31,45;CL:0002139,2.50e-30,24;CL:0000213,5.46e-26,58;CL:0000215,5.46e-26,58;CL:0000071,1.50e-23,18;CL:0002546,1.50e-23,18;CL:0000222,5.93e-23,121;CL:1000413,6.73e-13,9;CL:0002321,1.27e-09,250;CL:0002543,4.84e-09,6;CL:0002544,7.36e-09,6;CL:0000057,1.56e-08,76;CL:0005020,2.54e-08,6;CL:0002138,2.54e-08,6;CL:0005022,2.54e-08,6;CL:0002188,8.43e-08,5;CL:0002595,2.07e-07,5;CL:1000746,2.27e-07,7;CL:1000612,2.27e-07,7;CL:0000359,2.47e-07,32;CL:0000076,4.65e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.45e-23;18!CL:0005022;2.30e-08;6!CL:0000222;1.00e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!8.45e-29!69;UBERON:0004872!2.35e-28!84;UBERON:0002049!1.30e-27!79;UBERON:0007798!1.30e-27!79;UBERON:0001981!9.62e-25!60;UBERON:0007500!9.62e-25!60;UBERON:0004537!9.62e-25!60;UBERON:0006965!9.62e-25!60;UBERON:0003914!1.31e-24!118;UBERON:0001009!4.42e-22!113;UBERON:0004535!1.53e-21!110;UBERON:0001637!1.43e-16!42;UBERON:0003509!1.43e-16!42;UBERON:0004572!1.43e-16!42;UBERON:0004573!1.09e-13!33;UBERON:0004571!1.09e-13!33;UBERON:0001986!1.13e-13!18;UBERON:0004638!1.13e-13!18;UBERON:0004852!1.13e-13!18;UBERON:0004111!1.54e-13!241;UBERON:0006914!4.47e-13!25;UBERON:0000487!5.47e-13!22;UBERON:0000490!6.50e-13!138;UBERON:0000477!8.35e-11!286;UBERON:0005256!1.48e-10!143;UBERON:0002100!2.57e-10!216;UBERON:0000468!2.65e-09!659;UBERON:0000947!5.18e-09!21;UBERON:0010191!5.18e-09!21;UBERON:0002385!5.94e-09!63;UBERON:0001015!5.94e-09!63;UBERON:0000383!5.94e-09!63;UBERON:0000483!7.87e-09!309;UBERON:0003103!7.92e-09!69;UBERON:0000119!1.04e-08!312;UBERON:0001134!1.24e-08!61;UBERON:0002036!1.24e-08!61;UBERON:0003082!1.24e-08!61;UBERON:0000025!1.58e-08!194;UBERON:0004290!5.34e-08!70;UBERON:0000486!7.87e-08!82;UBERON:0003915!8.32e-08!9;UBERON:0004700!8.32e-08!9;UBERON:0001917!8.32e-08!9;UBERON:0000926!1.89e-07!448;UBERON:0004120!1.89e-07!448;UBERON:0006603!1.89e-07!448;UBERON:0007100!2.88e-07!27;UBERON:0000914!6.30e-07!83;UBERON:0002329!6.30e-07!83;UBERON:0003077!6.30e-07!83;UBERON:0003059!6.30e-07!83;UBERON:0007282!6.30e-07!83;UBERON:0009618!6.30e-07!83;UBERON:0007285!6.30e-07!83;UBERON:0000948!7.73e-07!24;UBERON:0005498!7.73e-07!24;UBERON:0004140!7.73e-07!24;UBERON:0009881!7.73e-07!24;UBERON:0004141!7.73e-07!24;UBERON:0003084!7.73e-07!24;UBERON:0007005!7.73e-07!24;UBERON:0004139!7.73e-07!24;UBERON:0004291!7.73e-07!24;UBERON:0000467!7.74e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.45e-23;18!UBERON:0001986;1.45e-23;18!UBERON:0004852;1.45e-23;18!UBERON:0006914;3.12e-21;25!UBERON:0000055;4.97e-21;65!UBERON:0000487;2.21e-20;22!UBERON:0007500;3.18e-18;56!UBERON:0001981;3.18e-18;56!UBERON:0004537;3.18e-18;56!UBERON:0001637;3.36e-18;42!UBERON:0003509;3.36e-18;42!UBERON:0004572;3.36e-18;42!UBERON:0004573;3.15e-16;33!UBERON:0004571;3.15e-16;33!UBERON:0002049;4.58e-15;75!UBERON:0007798;4.58e-15;75!UBERON:0003914;6.57e-14;74!UBERON:0003915;5.54e-13;9!UBERON:0004700;5.54e-13;9!UBERON:0001917;5.54e-13;9!UBERON:0000947;4.24e-12;21!UBERON:0010191;4.24e-12;21!UBERON:0000490;7.57e-12;33!UBERON:0001473;3.40e-10;8!UBERON:0004536;3.40e-10;8!UBERON:0006558;3.40e-10;8!UBERON:0004535;4.81e-10;109!UBERON:0003513;4.82e-10;7!UBERON:0004457;1.05e-08;9!UBERON:0000042;1.05e-08;9!UBERON:0000025;1.62e-08;93!UBERON:0001009;2.04e-08;112!UBERON:0003688;5.40e-08;6!UBERON:0002358;5.40e-08;6!UBERON:0003684;5.40e-08;6!UBERON:0001178;5.40e-08;6!UBERON:0002465;9.25e-08;10!UBERON:0000074;1.83e-07;7!UBERON:0001229;1.83e-07;7!UBERON:0003834;2.69e-07;5!UBERON:0001533;2.69e-07;5!UBERON:0001638;3.41e-07;9!UBERON:0003920;3.41e-07;9!UBERON:0004582;3.41e-07;9 | |||
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| ||
|short_description=p@chr1:22214518..22214534,- | |short_description=p@chr1:22214518..22214534,- | ||
}} | }} |
Latest revision as of 04:13, 28 July 2015
Short description: | p@chr1:22214518..22214534, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22214518..22214534, - |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.84e-32 | 36 |
meso-epithelial cell | 7.52e-31 | 45 |
endothelial cell of vascular tree | 2.50e-30 | 24 |
lining cell | 5.46e-26 | 58 |
barrier cell | 5.46e-26 | 58 |
blood vessel endothelial cell | 1.50e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-23 | 18 |
mesodermal cell | 5.93e-23 | 121 |
endothelial cell of artery | 6.73e-13 | 9 |
embryonic cell | 1.27e-09 | 250 |
vein endothelial cell | 4.84e-09 | 6 |
aortic endothelial cell | 7.36e-09 | 6 |
fibroblast | 1.56e-08 | 76 |
lymphangioblast | 2.54e-08 | 6 |
endothelial cell of lymphatic vessel | 2.54e-08 | 6 |
vascular lymphangioblast | 2.54e-08 | 6 |
glomerular endothelial cell | 8.43e-08 | 5 |
smooth muscle cell of the subclavian artery | 2.07e-07 | 5 |
glomerular cell | 2.27e-07 | 7 |
kidney corpuscule cell | 2.27e-07 | 7 |
vascular associated smooth muscle cell | 2.47e-07 | 32 |
squamous epithelial cell | 4.65e-07 | 63 |