FFCP PHASE1:Hg19::chr1:28270172..28270184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:28270172..28270184,+ | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chr1:28270172..28270184,+ | |description=CAGE_peak_at_chr1:28270172..28270184,+ | ||
|id=chr1:28270172..28270184,+ | |id=chr1:28270172..28270184,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.72e-98!42;CL:0000860!1.76e-90!45;CL:0000766!2.16e-74!76;CL:0002194!6.89e-63!63;CL:0000576!6.89e-63!63;CL:0000040!6.89e-63!63;CL:0000559!6.89e-63!63;CL:0002009!1.34e-60!65;CL:0000839!1.91e-55!70;CL:0000557!1.68e-54!71;CL:0000738!3.56e-48!140;CL:0000763!4.07e-46!112;CL:0000049!4.07e-46!112;CL:0002087!1.90e-41!119;CL:0000037!2.27e-36!172;CL:0000566!2.27e-36!172;CL:0002031!6.34e-34!124;CL:0002032!7.42e-34!165;CL:0000837!7.42e-34!165;CL:0000988!1.56e-33!182;CL:0002393!1.39e-21!9;CL:0002397!1.39e-21!9;CL:0000094!4.22e-20!8;CL:0000081!3.53e-14!11;CL:0000134!5.56e-11!358;CL:0002320!1.72e-10!365;CL:0000775!4.84e-09!3;CL:0000219!8.84e-09!390;CL:0000875!2.14e-08!3;CL:0002396!2.14e-08!3;CL:0000767!8.66e-08!3;CL:0000842!8.66e-08!3;CL:0000048!8.94e-07!430 | |ontology_enrichment_celltype=CL:0002057!7.72e-98!42;CL:0000860!1.76e-90!45;CL:0000766!2.16e-74!76;CL:0002194!6.89e-63!63;CL:0000576!6.89e-63!63;CL:0000040!6.89e-63!63;CL:0000559!6.89e-63!63;CL:0002009!1.34e-60!65;CL:0000839!1.91e-55!70;CL:0000557!1.68e-54!71;CL:0000738!3.56e-48!140;CL:0000763!4.07e-46!112;CL:0000049!4.07e-46!112;CL:0002087!1.90e-41!119;CL:0000037!2.27e-36!172;CL:0000566!2.27e-36!172;CL:0002031!6.34e-34!124;CL:0002032!7.42e-34!165;CL:0000837!7.42e-34!165;CL:0000988!1.56e-33!182;CL:0002393!1.39e-21!9;CL:0002397!1.39e-21!9;CL:0000094!4.22e-20!8;CL:0000081!3.53e-14!11;CL:0000134!5.56e-11!358;CL:0002320!1.72e-10!365;CL:0000775!4.84e-09!3;CL:0000219!8.84e-09!390;CL:0000875!2.14e-08!3;CL:0002396!2.14e-08!3;CL:0000767!8.66e-08!3;CL:0000842!8.66e-08!3;CL:0000048!8.94e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-72;33!CL:0002057;1.10e-72;33!CL:0000576;4.36e-58;48!CL:0000473;4.50e-53;39!CL:0000234;4.50e-53;39!CL:0000766;1.24e-42;69!CL:0000094;1.52e-22;8!CL:0002393;5.60e-21;6!CL:0002397;5.60e-21;6!CL:0000763;2.28e-18;100!CL:0000081;4.08e-16;11!CL:0002087;6.68e-14;104!CL:0000775;1.97e-12;3!CL:0000738;7.93e-12;136!CL:0000875;1.54e-11;3!CL:0002396;1.54e-11;3!CL:0000771;4.71e-09;2!CL:0000988;1.89e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.54e-112,42;CL:0002057,8.54e-112,42;CL:0000473,1.06e-96,48;CL:0000234,1.06e-96,48;CL:0000766,6.76e-89,72;CL:0002194,1.43e-75,59;CL:0000576,1.43e-75,59;CL:0000040,1.43e-75,59;CL:0000559,1.43e-75,59;CL:0002009,7.63e-73,61;CL:0000839,9.72e-67,66;CL:0000557,1.26e-65,67;CL:0000763,2.97e-56,108;CL:0000049,2.97e-56,108;CL:0000738,3.16e-47,136;CL:0002087,3.98e-39,115;CL:0000037,2.37e-36,168;CL:0002032,1.40e-34,161;CL:0000837,1.40e-34,161;CL:0000988,5.38e-34,177;CL:0002031,5.88e-33,120;CL:0002393,5.87e-31,9;CL:0002397,5.87e-31,9;CL:0000094,1.53e-22,8;CL:0000081,4.08e-16,11;CL:0000775,1.57e-12,3;CL:0000134,6.15e-12,354;CL:0000875,1.38e-11,3;CL:0002396,1.38e-11,3;CL:0002320,1.65e-11,361;CL:0000219,5.29e-10,386;CL:0000771,4.53e-09,2;CL:0000048,3.61e-08,427;CL:0000723,6.46e-08,433;CL:0000034,1.37e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;6.97e-78;42!CL:0000049;1.79e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.57e-64!102;UBERON:0003061!1.57e-64!102;UBERON:0002193!1.83e-57!112;UBERON:0002371!4.71e-47!80;UBERON:0001474!5.99e-43!86;UBERON:0004765!8.14e-35!101;UBERON:0001434!8.14e-35!101;UBERON:0002405!6.76e-34!115;UBERON:0003081!9.16e-24!216;UBERON:0000178!9.29e-23!15;UBERON:0000179!9.29e-23!15;UBERON:0000463!9.29e-23!15;UBERON:0002204!1.79e-16!167;UBERON:0002384!7.95e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.15e-28;15!UBERON:0000179;3.15e-28;15!UBERON:0000463;3.15e-28;15!UBERON:0002390;2.47e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.76e-76,98;UBERON:0003061,1.76e-76,98;UBERON:0002193,1.61e-68,108;UBERON:0002371,6.61e-57,76;UBERON:0001474,3.82e-52,82;UBERON:0004765,9.01e-47,90;UBERON:0002405,5.41e-45,93;UBERON:0001434,2.97e-41,100;UBERON:0003081,8.99e-32,203;UBERON:0000178,2.99e-28,15;UBERON:0000179,2.99e-28,15;UBERON:0000463,2.99e-28,15;UBERON:0002204,2.98e-21,167;UBERON:0000926,8.62e-17,315;UBERON:0004120,8.62e-17,315;UBERON:0006603,8.62e-17,315;UBERON:0002384,6.32e-11,371 | |||
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|short_description=p@chr1:28270172..28270184,+ | |short_description=p@chr1:28270172..28270184,+ | ||
}} | }} |
Latest revision as of 06:54, 28 July 2015
Short description: | p@chr1:28270172..28270184, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:28270172..28270184, + |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.76e-76 | 98 |
blood island | 1.76e-76 | 98 |
hemolymphoid system | 1.61e-68 | 108 |
bone marrow | 6.61e-57 | 76 |
bone element | 3.82e-52 | 82 |
skeletal element | 9.01e-47 | 90 |
immune system | 5.41e-45 | 93 |
skeletal system | 2.97e-41 | 100 |
lateral plate mesoderm | 8.99e-32 | 203 |
blood | 2.99e-28 | 15 |
haemolymphatic fluid | 2.99e-28 | 15 |
organism substance | 2.99e-28 | 15 |
musculoskeletal system | 2.98e-21 | 167 |
mesoderm | 8.62e-17 | 315 |
mesoderm-derived structure | 8.62e-17 | 315 |
presumptive mesoderm | 8.62e-17 | 315 |
connective tissue | 6.32e-11 | 371 |