FFCP PHASE1:Hg19::chr1:40865174..40865179,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:40865174..40865179,+ | |||
|coexpression_cluster_id=C2583 | |coexpression_cluster_id=C2583 | ||
|description=CAGE_peak_at_chr1:40865174..40865179,+ | |description=CAGE_peak_at_chr1:40865174..40865179,+ | ||
|id=chr1:40865174..40865179,+ | |id=chr1:40865174..40865179,+ | ||
|ontology_enrichment_celltype=CL:0002087!4.28e-25!119;CL:0000738!1.25e-23!140;CL:0002031!3.15e-21!124;CL:0000037!1.72e-20!172;CL:0000566!1.72e-20!172;CL:0000988!5.66e-20!182;CL:0002032!2.75e-19!165;CL:0000837!2.75e-19!165;CL:0002194!3.50e-12!63;CL:0000576!3.50e-12!63;CL:0000040!3.50e-12!63;CL:0000559!3.50e-12!63;CL:0000839!1.56e-11!70;CL:0000766!1.80e-11!76;CL:0002009!2.28e-11!65;CL:0000542!2.52e-11!53;CL:0000051!2.52e-11!53;CL:0002057!6.10e-11!42;CL:0000838!6.51e-11!52;CL:0000557!1.74e-10!71;CL:0000860!1.68e-09!45;CL:0000763!4.63e-09!112;CL:0000049!4.63e-09!112;CL:0002393!4.50e-07!9;CL:0002397!4.50e-07!9 | |ontology_enrichment_celltype=CL:0002087!4.28e-25!119;CL:0000738!1.25e-23!140;CL:0002031!3.15e-21!124;CL:0000037!1.72e-20!172;CL:0000566!1.72e-20!172;CL:0000988!5.66e-20!182;CL:0002032!2.75e-19!165;CL:0000837!2.75e-19!165;CL:0002194!3.50e-12!63;CL:0000576!3.50e-12!63;CL:0000040!3.50e-12!63;CL:0000559!3.50e-12!63;CL:0000839!1.56e-11!70;CL:0000766!1.80e-11!76;CL:0002009!2.28e-11!65;CL:0000542!2.52e-11!53;CL:0000051!2.52e-11!53;CL:0002057!6.10e-11!42;CL:0000838!6.51e-11!52;CL:0000557!1.74e-10!71;CL:0000860!1.68e-09!45;CL:0000763!4.63e-09!112;CL:0000049!4.63e-09!112;CL:0002393!4.50e-07!9;CL:0002397!4.50e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.06e-07;48!CL:0000860;1.81e-07;33!CL:0002057;1.81e-07;33!CL:0000775;5.05e-07;3!CL:0000226;7.87e-07;3!CL:0000842;7.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.30e-15,115;CL:0000738,1.53e-14,136;CL:0002031,2.16e-11,120;CL:0000988,7.50e-11,177;CL:0000037,1.23e-10,168;CL:0000766,1.90e-09,72;CL:0002032,3.42e-09,161;CL:0000837,3.42e-09,161;CL:0002194,8.51e-09,59;CL:0000576,8.51e-09,59;CL:0000040,8.51e-09,59;CL:0000559,8.51e-09,59;CL:0002009,2.00e-08,61;CL:0000860,5.10e-08,42;CL:0002057,5.10e-08,42;CL:0000839,1.34e-07,66;CL:0000557,1.89e-07,67;CL:0000775,4.99e-07,3;CL:0000226,7.68e-07,3;CL:0000842,7.68e-07,3;CL:0000473,8.67e-07,48;CL:0000234,8.67e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.49e-17!102;UBERON:0003061!7.49e-17!102;UBERON:0007023!9.16e-16!115;UBERON:0002193!7.43e-15!112;UBERON:0000178!8.83e-10!15;UBERON:0000179!8.83e-10!15;UBERON:0000463!8.83e-10!15;UBERON:0002371!8.13e-09!80;UBERON:0001474!4.24e-08!86;UBERON:0002619!1.61e-07!22;UBERON:0002020!1.81e-07!34;UBERON:0003528!1.81e-07!34;UBERON:0002405!2.95e-07!115;UBERON:0001893!3.40e-07!34;UBERON:0002791!4.46e-07!33 | |ontology_enrichment_uberon=UBERON:0002390!7.49e-17!102;UBERON:0003061!7.49e-17!102;UBERON:0007023!9.16e-16!115;UBERON:0002193!7.43e-15!112;UBERON:0000178!8.83e-10!15;UBERON:0000179!8.83e-10!15;UBERON:0000463!8.83e-10!15;UBERON:0002371!8.13e-09!80;UBERON:0001474!4.24e-08!86;UBERON:0002619!1.61e-07!22;UBERON:0002020!1.81e-07!34;UBERON:0003528!1.81e-07!34;UBERON:0002405!2.95e-07!115;UBERON:0001893!3.40e-07!34;UBERON:0002791!4.46e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-21;15!UBERON:0000179;1.64e-21;15!UBERON:0000463;1.64e-21;15!UBERON:0002390;7.09e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.19e-21,15;UBERON:0000179,1.19e-21,15;UBERON:0000463,1.19e-21,15;UBERON:0002390,4.09e-15,98;UBERON:0003061,4.09e-15,98;UBERON:0002193,3.00e-13,108 | |||
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| ||
|short_description=p@chr1:40865174..40865179,+ | |short_description=p@chr1:40865174..40865179,+ | ||
}} | }} |
Latest revision as of 08:12, 28 July 2015
Short description: | p@chr1:40865174..40865179, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40865174..40865179, + |
Coexpression cluster: | C2583_CD19_Neutrophils_CD14_Peripheral_Whole_CD4_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.30e-15 | 115 |
leukocyte | 1.53e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 2.16e-11 | 120 |
hematopoietic cell | 7.50e-11 | 177 |
hematopoietic stem cell | 1.23e-10 | 168 |
myeloid leukocyte | 1.90e-09 | 72 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 161 |
monopoietic cell | 8.51e-09 | 59 |
monocyte | 8.51e-09 | 59 |
monoblast | 8.51e-09 | 59 |
promonocyte | 8.51e-09 | 59 |
macrophage dendritic cell progenitor | 2.00e-08 | 61 |
classical monocyte | 5.10e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.10e-08 | 42 |
myeloid lineage restricted progenitor cell | 1.34e-07 | 66 |
granulocyte monocyte progenitor cell | 1.89e-07 | 67 |
neutrophil | 4.99e-07 | 3 |
single nucleate cell | 7.68e-07 | 3 |
mononuclear cell | 7.68e-07 | 3 |
defensive cell | 8.67e-07 | 48 |
phagocyte | 8.67e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 1.19e-21 | 15 |
haemolymphatic fluid | 1.19e-21 | 15 |
organism substance | 1.19e-21 | 15 |
hematopoietic system | 4.09e-15 | 98 |
blood island | 4.09e-15 | 98 |
hemolymphoid system | 3.00e-13 | 108 |