FFCP PHASE1:Hg19::chr20:21143521..21143537,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:21143521..21143537,+ | |||
|coexpression_cluster_id=C1670 | |coexpression_cluster_id=C1670 | ||
|description=CAGE_peak_at_chr20:21143521..21143537,+ | |description=CAGE_peak_at_chr20:21143521..21143537,+ | ||
|id=chr20:21143521..21143537,+ | |id=chr20:21143521..21143537,+ | ||
|ontology_enrichment_celltype=CL:0002076!4.27e-21!43;CL:0002159!1.32e-20!13;CL:0000066!1.70e-17!254;CL:0000244!1.76e-14!4;CL:0000731!1.76e-14!4;CL:0000223!3.96e-14!59;CL:0002077!1.70e-12!33;CL:0002166!7.35e-12!3;CL:0002368!7.60e-12!13;CL:0002251!1.66e-11!21;CL:0002621!3.61e-11!3;CL:0000622!4.68e-11!5;CL:0000362!9.47e-11!8;CL:0000076!5.38e-10!62;CL:0000240!1.32e-09!6;CL:0000311!1.32e-09!6;CL:0000079!1.32e-09!6;CL:0000237!1.32e-09!6;CL:0000036!1.32e-09!6;CL:0000357!1.32e-09!6;CL:0000114!1.32e-09!6;CL:0000154!3.24e-09!6;CL:0002327!1.11e-08!4;CL:0000317!7.19e-08!2;CL:1000448!7.19e-08!2;CL:0002308!7.19e-08!2;CL:0002140!7.19e-08!2;CL:0000312!6.77e-07!5 | |ontology_enrichment_celltype=CL:0002076!4.27e-21!43;CL:0002159!1.32e-20!13;CL:0000066!1.70e-17!254;CL:0000244!1.76e-14!4;CL:0000731!1.76e-14!4;CL:0000223!3.96e-14!59;CL:0002077!1.70e-12!33;CL:0002166!7.35e-12!3;CL:0002368!7.60e-12!13;CL:0002251!1.66e-11!21;CL:0002621!3.61e-11!3;CL:0000622!4.68e-11!5;CL:0000362!9.47e-11!8;CL:0000076!5.38e-10!62;CL:0000240!1.32e-09!6;CL:0000311!1.32e-09!6;CL:0000079!1.32e-09!6;CL:0000237!1.32e-09!6;CL:0000036!1.32e-09!6;CL:0000357!1.32e-09!6;CL:0000114!1.32e-09!6;CL:0000154!3.24e-09!6;CL:0002327!1.11e-08!4;CL:0000317!7.19e-08!2;CL:1000448!7.19e-08!2;CL:0002308!7.19e-08!2;CL:0002140!7.19e-08!2;CL:0000312!6.77e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.44e-26;14!CL:0000244;4.20e-24;4!CL:0000731;4.20e-24;4!CL:0002166;1.46e-19;3!CL:0002621;2.30e-18;3!CL:0002076;8.62e-18;42!CL:0000240;6.39e-16;6!CL:0000311;6.39e-16;6!CL:0000079;6.39e-16;6!CL:0000237;6.39e-16;6!CL:0002327;3.39e-14;4!CL:0002077;1.08e-13;34!CL:0000312;2.83e-11;5!CL:0002368;5.48e-11;13!CL:0000362;7.33e-11;9!CL:0002251;4.14e-10;20!CL:0002231;6.72e-09;3!CL:0000307;1.33e-08;3!CL:0002336;4.60e-07;1!CL:0002261;4.60e-07;1!CL:0002170;4.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.29e-26,14;CL:0000244,3.74e-24,4;CL:0000731,3.74e-24,4;CL:0002076,5.48e-21,42;CL:0000066,7.90e-20,253;CL:0002166,1.47e-19,3;CL:0002621,2.37e-18,3;CL:0000240,4.33e-16,6;CL:0000311,4.33e-16,6;CL:0000079,4.33e-16,6;CL:0000237,4.33e-16,6;CL:0000036,4.33e-16,6;CL:0000357,4.33e-16,6;CL:0000114,4.33e-16,6;CL:0002077,6.39e-16,34;CL:0000223,1.74e-14,58;CL:0002327,2.84e-14,4;CL:0000312,2.55e-11,5;CL:0002368,5.73e-11,13;CL:0000362,6.89e-11,9;CL:0002251,3.54e-10,20;CL:0002231,6.09e-09,3;CL:0000068,1.69e-08,3;CL:0000069,1.69e-08,3;CL:0000307,1.69e-08,3;CL:0000377,1.69e-08,3;CL:0000221,9.21e-08,72;CL:0002321,1.09e-07,250;CL:0002336,3.02e-07,1;CL:0002261,3.02e-07,1;CL:0002170,3.02e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;6.39e-16;6!CL:0000114;6.39e-16;6!CL:0000223;3.07e-09;58!CL:0000377;1.33e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!1.71e-17!14 | |ontology_enrichment_disease=DOID:1749!1.71e-17!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!1.28e-17!35;UBERON:0000365!3.36e-17!5;UBERON:0005910!2.81e-14!6;UBERON:0003102!1.15e-12!95;UBERON:0000166!2.47e-11!21;UBERON:0001949!3.61e-11!3;UBERON:0003729!4.21e-11!5;UBERON:0000165!4.63e-10!28;UBERON:0000930!4.63e-10!28;UBERON:0004119!5.83e-10!169;UBERON:0000925!5.83e-10!169;UBERON:0006595!5.83e-10!169;UBERON:0001004!3.08e-09!72;UBERON:0001708!5.56e-09!4;UBERON:0001704!5.56e-09!4;UBERON:0001911!1.11e-08!4;UBERON:0005333!1.11e-08!4;UBERON:0008425!1.11e-08!4;UBERON:0005311!1.11e-08!4;UBERON:0003343!3.89e-08!4;UBERON:0004785!3.89e-08!4;UBERON:0002419!7.19e-08!2;UBERON:0007771!7.19e-08!2;UBERON:0003297!7.19e-08!2;UBERON:0001821!7.19e-08!2;UBERON:0003487!7.19e-08!2;UBERON:0001820!7.19e-08!2;UBERON:0005089!7.19e-08!2;UBERON:0005088!7.19e-08!2;UBERON:0000162!9.72e-08!14;UBERON:0001353!9.72e-08!14;UBERON:0000163!9.72e-08!14;UBERON:0006866!9.72e-08!14;UBERON:0000164!9.72e-08!14;UBERON:0000931!9.72e-08!14;UBERON:0000369!1.93e-07!4;UBERON:0002435!1.93e-07!4;UBERON:0000204!1.93e-07!4;UBERON:0010082!1.93e-07!4;UBERON:0001046!2.29e-07!19;UBERON:0001255!2.99e-07!2;UBERON:0001556!2.99e-07!2;UBERON:0004122!3.53e-07!15;UBERON:0009663!3.68e-07!7 | |ontology_enrichment_uberon=UBERON:0000161!1.28e-17!35;UBERON:0000365!3.36e-17!5;UBERON:0005910!2.81e-14!6;UBERON:0003102!1.15e-12!95;UBERON:0000166!2.47e-11!21;UBERON:0001949!3.61e-11!3;UBERON:0003729!4.21e-11!5;UBERON:0000165!4.63e-10!28;UBERON:0000930!4.63e-10!28;UBERON:0004119!5.83e-10!169;UBERON:0000925!5.83e-10!169;UBERON:0006595!5.83e-10!169;UBERON:0001004!3.08e-09!72;UBERON:0001708!5.56e-09!4;UBERON:0001704!5.56e-09!4;UBERON:0001911!1.11e-08!4;UBERON:0005333!1.11e-08!4;UBERON:0008425!1.11e-08!4;UBERON:0005311!1.11e-08!4;UBERON:0003343!3.89e-08!4;UBERON:0004785!3.89e-08!4;UBERON:0002419!7.19e-08!2;UBERON:0007771!7.19e-08!2;UBERON:0003297!7.19e-08!2;UBERON:0001821!7.19e-08!2;UBERON:0003487!7.19e-08!2;UBERON:0001820!7.19e-08!2;UBERON:0005089!7.19e-08!2;UBERON:0005088!7.19e-08!2;UBERON:0000162!9.72e-08!14;UBERON:0001353!9.72e-08!14;UBERON:0000163!9.72e-08!14;UBERON:0006866!9.72e-08!14;UBERON:0000164!9.72e-08!14;UBERON:0000931!9.72e-08!14;UBERON:0000369!1.93e-07!4;UBERON:0002435!1.93e-07!4;UBERON:0000204!1.93e-07!4;UBERON:0010082!1.93e-07!4;UBERON:0001046!2.29e-07!19;UBERON:0001255!2.99e-07!2;UBERON:0001556!2.99e-07!2;UBERON:0004122!3.53e-07!15;UBERON:0009663!3.68e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.09e-23;12!UBERON:0000365;2.49e-19;5!UBERON:0001949;2.30e-18;3!UBERON:0005910;3.84e-16;6!UBERON:0001708;8.33e-15;4!UBERON:0008895;8.33e-15;4!UBERON:0001911;3.39e-14;4!UBERON:0011159;6.07e-12;5!UBERON:0003729;2.95e-11;13!UBERON:0010371;1.19e-08;31!UBERON:0003929;3.69e-08;7!UBERON:0000161;1.26e-07;19!UBERON:0000166;1.26e-07;19!UBERON:0000344;3.12e-07;20!UBERON:0003350;3.41e-07;8!UBERON:0001828;3.41e-07;8!UBERON:0000165;4.63e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.27e-19,5;UBERON:0001949,2.37e-18,3;UBERON:0005910,3.56e-16,6;UBERON:0001708,8.35e-15,4;UBERON:0008895,8.35e-15,4;UBERON:0001911,2.84e-14,4;UBERON:0005333,2.84e-14,4;UBERON:0008425,2.84e-14,4;UBERON:0005311,2.84e-14,4;UBERON:0003102,3.93e-12,99;UBERON:0011159,6.08e-12,5;UBERON:0003729,2.56e-11,13;UBERON:0010188,5.00e-10,6;UBERON:0002539,5.00e-10,6;UBERON:0008816,5.00e-10,6;UBERON:0000033,5.84e-09,56;UBERON:0000153,6.34e-08,62;UBERON:0007811,6.34e-08,62;UBERON:0000076,2.29e-07,8;UBERON:0000344,2.86e-07,20;UBERON:0000161,3.01e-07,36;UBERON:0003350,3.45e-07,8;UBERON:0001828,3.45e-07,8;UBERON:0004119,4.96e-07,160;UBERON:0000925,4.96e-07,160;UBERON:0006595,4.96e-07,160;UBERON:0000165,7.64e-07,29;UBERON:0000930,7.64e-07,29 | |||
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|short_description=p@chr20:21143521..21143537,+ | |short_description=p@chr20:21143521..21143537,+ | ||
}} | }} |
Latest revision as of 12:22, 28 July 2015
Short description: | p@chr20:21143521..21143537, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:21143521..21143537, + |
Coexpression cluster: | C1670_Urothelial_Mallassezderived_squamous_Gingival_Mammary_oral_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 2.27e-19 | 5 |
gingival epithelium | 2.37e-18 | 3 |
transitional epithelium | 3.56e-16 | 6 |
jaw skeleton | 8.35e-15 | 4 |
splanchnocranium | 8.35e-15 | 4 |
mammary gland | 2.84e-14 | 4 |
mammary bud | 2.84e-14 | 4 |
mammary ridge | 2.84e-14 | 4 |
mammary placode | 2.84e-14 | 4 |
surface structure | 3.93e-12 | 99 |
primary subdivision of cranial skeletal system | 6.08e-12 | 5 |
mouth mucosa | 2.56e-11 | 13 |
protuberance | 5.00e-10 | 6 |
pharyngeal arch | 5.00e-10 | 6 |
embryonic head | 5.00e-10 | 6 |
head | 5.84e-09 | 56 |
anterior region of body | 6.34e-08 | 62 |
craniocervical region | 6.34e-08 | 62 |
external ectoderm | 2.29e-07 | 8 |
mucosa | 2.86e-07 | 20 |
orifice | 3.01e-07 | 36 |
epithelium of mucosa | 3.45e-07 | 8 |
gingiva | 3.45e-07 | 8 |
endoderm-derived structure | 4.96e-07 | 160 |
endoderm | 4.96e-07 | 160 |
presumptive endoderm | 4.96e-07 | 160 |
mouth | 7.64e-07 | 29 |
stomodeum | 7.64e-07 | 29 |