FFCP PHASE1:Hg19::chr20:36785352..36785360,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:36785352..36785360,- to FFCP PHASE1:Hg19::chr20:36785352..36785360,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:36785352..36785360,- | |||
|description=CAGE_peak_at_chr20:36785352..36785360,- | |||
|id=chr20:36785352..36785360,- | |||
|ontology_enrichment_celltype=CL:1000507!1.89e-08!12;CL:1000494!1.89e-08!12;CL:0002543!4.14e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.76e-21;3!CL:1000615;1.76e-21;3!CL:0002306;1.76e-21;3!CL:0002379;1.65e-16;1!CL:1000507;2.03e-14;10!CL:1000494;2.03e-14;10!CL:0002681;4.03e-12;12!CL:0002584;4.03e-12;12!CL:0002543;4.37e-11;6!CL:1000449;8.14e-10;15!CL:0002535;3.43e-09;2!CL:0000650;6.42e-09;2!CL:1000500;6.42e-09;2!CL:1000618;6.42e-09;2!CL:1001318;6.42e-09;2!CL:0002173;6.42e-09;2!CL:1000497;1.00e-08;17!CL:0002518;1.00e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.17e-21,3;CL:1000615,2.17e-21,3;CL:0002306,2.17e-21,3;CL:0002379,2.63e-16,1;CL:1000507,2.67e-14,10;CL:1000494,2.67e-14,10;CL:0002681,5.06e-12,12;CL:0002584,5.06e-12,12;CL:0002543,3.57e-11,6;CL:1000449,9.76e-10,15;CL:0002535,3.43e-09,2;CL:0000650,8.74e-09,2;CL:1000500,8.74e-09,2;CL:1000618,8.74e-09,2;CL:1001318,8.74e-09,2;CL:0002173,8.74e-09,2;CL:1000497,1.17e-08,17;CL:0002518,1.17e-08,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.48e-31;2!DOID:178;1.65e-16;1!DOID:326;1.65e-16;1!DOID:3978;1.65e-16;1!DOID:3620;1.65e-16;1!DOID:3394;1.65e-16;1!DOID:3565;1.65e-16;1!DOID:5844;1.65e-16;1!DOID:3112;1.65e-16;1!DOID:1287;2.53e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.37e-31,2;DOID:3112,1.04e-16,1;DOID:178,1.41e-16,1;DOID:326,1.41e-16,1;DOID:3978,1.41e-16,1;DOID:3394,1.41e-16,1;DOID:5844,1.41e-16,1;DOID:1287,2.44e-16,4;DOID:3620,2.63e-16,1;DOID:3565,2.63e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.38e-16!115;UBERON:0005631!2.99e-10!14;UBERON:0000158!2.99e-10!14;UBERON:0009773!1.89e-08!12;UBERON:0001231!1.89e-08!12;UBERON:0004810!1.89e-08!12;UBERON:0000477!2.83e-08!286;UBERON:0000062!1.10e-07!511;UBERON:0000064!1.55e-07!219;UBERON:0000025!3.56e-07!194;UBERON:0001987!8.67e-07!4;UBERON:0004340!8.67e-07!4;UBERON:0000467!9.36e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.76e-21;3!UBERON:0007685;1.76e-21;3!UBERON:0004134;1.76e-21;3!UBERON:0002134;6.99e-17;1!UBERON:0005208;6.99e-17;1!UBERON:0004145;6.99e-17;1!UBERON:0005946;6.99e-17;1!UBERON:0005965;6.99e-17;1!UBERON:0002078;6.99e-17;1!UBERON:0004211;2.03e-14;10!UBERON:0009773;2.03e-14;10!UBERON:0001231;2.03e-14;10!UBERON:0004810;2.03e-14;10!UBERON:0001225;4.03e-12;12!UBERON:0008987;4.03e-12;12!UBERON:0007100;3.92e-10;25!UBERON:0001851;8.14e-10;15!UBERON:0006555;8.14e-10;15!UBERON:0000353;8.14e-10;15!UBERON:0004819;8.14e-10;15!UBERON:0001285;8.14e-10;15!UBERON:0007684;8.14e-10;15!UBERON:0006955;3.43e-09;2!UBERON:0004801;3.43e-09;2!UBERON:0002081;4.18e-09;2!UBERON:0002133;4.18e-09;2!UBERON:0003567;6.42e-09;2!UBERON:0003838;6.42e-09;2!UBERON:0003586;6.42e-09;2!UBERON:0005169;6.42e-09;2!UBERON:0002321;6.42e-09;2!UBERON:0005215;6.42e-09;2!UBERON:0002303;6.42e-09;2!UBERON:0002319;6.42e-09;2!UBERON:0001638;1.09e-07;9!UBERON:0003920;1.09e-07;9!UBERON:0004582;1.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.17e-21,3;UBERON:0007685,2.17e-21,3;UBERON:0004134,2.17e-21,3;UBERON:0002134,6.47e-17,1;UBERON:0005208,6.47e-17,1;UBERON:0005946,6.47e-17,1;UBERON:0005965,6.47e-17,1;UBERON:0002078,6.47e-17,1;UBERON:0004810,2.67e-14,10;UBERON:0001225,5.06e-12,12;UBERON:0008987,5.06e-12,12;UBERON:0003103,1.45e-10,68;UBERON:0001851,9.76e-10,15;UBERON:0004211,9.76e-10,15;UBERON:0009773,9.76e-10,15;UBERON:0000353,9.76e-10,15;UBERON:0001231,9.76e-10,15;UBERON:0001285,9.76e-10,15;UBERON:0007684,9.76e-10,15;UBERON:0004208,9.76e-10,15;UBERON:0007100,2.11e-09,27;UBERON:0006955,3.43e-09,2;UBERON:0004801,3.43e-09,2;UBERON:0006555,3.65e-09,16;UBERON:0004819,3.65e-09,16;UBERON:0002081,4.02e-09,2;UBERON:0002133,4.02e-09,2;UBERON:0010227,4.02e-09,2;UBERON:0003567,8.74e-09,2;UBERON:0003838,8.74e-09,2;UBERON:0003586,8.74e-09,2;UBERON:0005169,8.74e-09,2;UBERON:0002321,8.74e-09,2;UBERON:0005215,8.74e-09,2;UBERON:0002303,8.74e-09,2;UBERON:0002319,8.74e-09,2;UBERON:0001638,9.52e-08,9;UBERON:0003920,9.52e-08,9;UBERON:0004582,9.52e-08,9 | |||
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| ||
|short_description=p@chr20:36785352..36785360,- | |||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36785352..36785360, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36785352..36785360, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.17e-21 | 3 |
kidney cortex tubule cell | 2.17e-21 | 3 |
epithelial cell of proximal tubule | 2.17e-21 | 3 |
meningothelial cell | 2.63e-16 | 1 |
kidney tubule cell | 2.67e-14 | 10 |
nephron tubule epithelial cell | 2.67e-14 | 10 |
kidney cortical cell | 5.06e-12 | 12 |
renal cortical epithelial cell | 5.06e-12 | 12 |
vein endothelial cell | 3.57e-11 | 6 |
epithelial cell of nephron | 9.76e-10 | 15 |
epithelial cell of cervix | 3.43e-09 | 2 |
mesangial cell | 8.74e-09 | 2 |
kidney interstitial cell | 8.74e-09 | 2 |
juxtaglomerular complex cell | 8.74e-09 | 2 |
renal interstitial pericyte | 8.74e-09 | 2 |
extraglomerular mesangial cell | 8.74e-09 | 2 |
kidney cell | 1.17e-08 | 17 |
kidney epithelial cell | 1.17e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.37e-31 | 2 |
papillary adenocarcinoma | 1.04e-16 | 1 |
vascular disease | 1.41e-16 | 1 |
ischemia | 1.41e-16 | 1 |
extrinsic cardiomyopathy | 1.41e-16 | 1 |
myocardial ischemia | 1.41e-16 | 1 |
myocardial infarction | 1.41e-16 | 1 |
cardiovascular system disease | 2.44e-16 | 4 |
central nervous system cancer | 2.63e-16 | 1 |
meningioma | 2.63e-16 | 1 |