FFCP PHASE1:Hg19::chr22:37319278..37319288,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:37319278..37319288,+ | |||
|coexpression_cluster_id=C1581 | |coexpression_cluster_id=C1581 | ||
|description=CAGE_peak_at_chr22:37319278..37319288,+ | |description=CAGE_peak_at_chr22:37319278..37319288,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000766!2.64e-46!76;CL:0000738!3.16e-45!140;CL:0000763!5.42e-42!112;CL:0000049!5.42e-42!112;CL:0000557!2.56e-41!71;CL:0000037!6.88e-41!172;CL:0000566!6.88e-41!172;CL:0002057!1.03e-40!42;CL:0000988!4.48e-40!182;CL:0000839!7.51e-40!70;CL:0000860!3.00e-37!45;CL:0002032!2.07e-36!165;CL:0000837!2.07e-36!165;CL:0002009!5.32e-35!65;CL:0002194!2.59e-34!63;CL:0000576!2.59e-34!63;CL:0000040!2.59e-34!63;CL:0000559!2.59e-34!63;CL:0002031!1.45e-31!124;CL:0002087!1.25e-28!119;CL:0000451!9.88e-13!10;CL:0000134!8.64e-11!358;CL:0002320!3.29e-10!365;CL:0000990!7.27e-10!8;CL:0002274!8.10e-10!5;CL:0000457!8.10e-10!5;CL:0002191!8.10e-10!5;CL:0000097!8.10e-10!5;CL:0000831!8.10e-10!5;CL:0002028!8.10e-10!5;CL:0000219!3.35e-08!390;CL:0000048!1.62e-07!430;CL:0000723!3.75e-07!436;CL:0000775!4.54e-07!3;CL:0000080!7.46e-07!6;CL:0002541!8.52e-07!3 | |ontology_enrichment_celltype=CL:0000766!2.64e-46!76;CL:0000738!3.16e-45!140;CL:0000763!5.42e-42!112;CL:0000049!5.42e-42!112;CL:0000557!2.56e-41!71;CL:0000037!6.88e-41!172;CL:0000566!6.88e-41!172;CL:0002057!1.03e-40!42;CL:0000988!4.48e-40!182;CL:0000839!7.51e-40!70;CL:0000860!3.00e-37!45;CL:0002032!2.07e-36!165;CL:0000837!2.07e-36!165;CL:0002009!5.32e-35!65;CL:0002194!2.59e-34!63;CL:0000576!2.59e-34!63;CL:0000040!2.59e-34!63;CL:0000559!2.59e-34!63;CL:0002031!1.45e-31!124;CL:0002087!1.25e-28!119;CL:0000451!9.88e-13!10;CL:0000134!8.64e-11!358;CL:0002320!3.29e-10!365;CL:0000990!7.27e-10!8;CL:0002274!8.10e-10!5;CL:0000457!8.10e-10!5;CL:0002191!8.10e-10!5;CL:0000097!8.10e-10!5;CL:0000831!8.10e-10!5;CL:0002028!8.10e-10!5;CL:0000219!3.35e-08!390;CL:0000048!1.62e-07!430;CL:0000723!3.75e-07!436;CL:0000775!4.54e-07!3;CL:0000080!7.46e-07!6;CL:0002541!8.52e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.64e-33;33!CL:0002057;7.64e-33;33!CL:0000775;6.25e-24;3!CL:0000473;3.60e-22;39!CL:0000234;3.60e-22;39!CL:0000576;3.31e-16;48!CL:0000097;5.59e-15;5!CL:0000766;6.05e-15;69!CL:0000763;2.12e-11;100!CL:0002541;3.89e-11;3!CL:0000094;2.53e-09;8!CL:0000163;1.52e-08;9!CL:0000738;3.54e-07;136!CL:0000081;6.64e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;7.64e-33;33!CL:0002057;7.64e-33;33!CL:0000775;6.25e-24;3!CL:0000473;3.60e-22;39!CL:0000234;3.60e-22;39!CL:0000576;3.31e-16;48!CL:0000097;5.59e-15;5!CL:0000766;6.05e-15;69!CL:0000763;2.12e-11;100!CL:0002541;3.89e-11;3!CL:0000094;2.53e-09;8!CL:0000163;1.52e-08;9!CL:0000738;3.54e-07;136!CL:0000081;6.64e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.86e-39,72;CL:0000557,1.25e-33,67;CL:0000763,1.31e-30,108;CL:0000049,1.31e-30,108;CL:0000839,2.07e-30,66;CL:0000860,7.26e-29,42;CL:0002057,7.26e-29,42;CL:0002009,3.42e-25,61;CL:0000473,5.72e-25,48;CL:0000234,5.72e-25,48;CL:0000775,5.79e-24,3;CL:0002194,1.05e-22,59;CL:0000576,1.05e-22,59;CL:0000040,1.05e-22,59;CL:0000559,1.05e-22,59;CL:0000738,2.66e-21,136;CL:0002032,2.30e-19,161;CL:0000837,2.30e-19,161;CL:0000037,2.09e-18,168;CL:0002031,1.81e-17,120;CL:0000988,2.79e-17,177;CL:0000097,5.21e-15,5;CL:0002028,5.21e-15,5;CL:0002541,3.60e-11,3;CL:0002087,1.64e-10,115;CL:0000094,2.46e-09,8;CL:0000134,1.45e-08,354;CL:0000163,1.47e-08,9;CL:0002320,2.56e-08,361;CL:0000219,1.91e-07,386;CL:0000081,6.51e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;4.58e-22;42!CL:0000049;6.02e-08;108 | |ontology_enrichment_development_v019=CL:0002057;4.58e-22;42!CL:0000049;6.02e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;8.16e-09;1 | |ontology_enrichment_disease_v019=DOID:8552;8.16e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8552,9.17e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.16e-41!102;UBERON:0003061!6.16e-41!102;UBERON:0002193!2.03e-40!112;UBERON:0002371!4.48e-35!80;UBERON:0001474!1.21e-31!86;UBERON:0002405!1.49e-29!115;UBERON:0004765!7.03e-25!101;UBERON:0001434!7.03e-25!101;UBERON:0003081!2.47e-14!216;UBERON:0002204!2.18e-11!167;UBERON:0002384!6.17e-10!375;UBERON:0000476!8.52e-07!3;UBERON:0000920!8.52e-07!3 | |ontology_enrichment_uberon=UBERON:0002390!6.16e-41!102;UBERON:0003061!6.16e-41!102;UBERON:0002193!2.03e-40!112;UBERON:0002371!4.48e-35!80;UBERON:0001474!1.21e-31!86;UBERON:0002405!1.49e-29!115;UBERON:0004765!7.03e-25!101;UBERON:0001434!7.03e-25!101;UBERON:0003081!2.47e-14!216;UBERON:0002204!2.18e-11!167;UBERON:0002384!6.17e-10!375;UBERON:0000476!8.52e-07!3;UBERON:0000920!8.52e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.89e-11;3!UBERON:0000920;3.89e-11;3 | |ontology_enrichment_uberon_v019=UBERON:0003124;3.89e-11;3!UBERON:0000920;3.89e-11;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-29,76;UBERON:0001474,5.74e-27,82;UBERON:0002390,9.35e-25,98;UBERON:0003061,9.35e-25,98;UBERON:0004765,2.61e-24,90;UBERON:0002405,1.98e-23,93;UBERON:0002193,3.59e-22,108;UBERON:0001434,1.40e-21,100;UBERON:0002204,1.19e-11,167;UBERON:0000920,3.60e-11,3;UBERON:0003081,3.16e-10,203;UBERON:0002384,5.57e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0.290796477559129,0,0.727752183563449,1.16214518452842,0.411167888021826,0,4.31538588483226,3.58624989140741,2.83778675866302,0.344745680736619,0,0,0.564727018627814,0.818718450173537,0.449446968890169,0.306083892370903,1.28371610830437,1.27867425159808,3.29851300186716,4.78712778291916,5.11469700639233,0.580418477257168,0.56738522469114,0.622822248995575,2.00998932205395,2.60741459210101,2.82345498116652,0.605399502633369,1.47311054395026,0.316462387440884,0.422510572623884,0.637812899895131,0,0.561643155732475,0.150176892841506,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696518949197069,1.19662164466979,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0.176096868026452,5.59785911960085,2.59415916150531,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,1.5950057986596,0.641183153813036,2.13213910407454,0,0,1.16348177330109,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,0.490696182767533,0,0,0,0.19998739585493,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0.257575567634187,0.290796477559129,0,0.727752183563449,1.16214518452842,0.411167888021826,0,4.31538588483226,3.58624989140741,2.83778675866302,0.344745680736619,0,0,0.564727018627814,0.818718450173537,0.449446968890169,0.306083892370903,1.28371610830437,1.27867425159808,3.29851300186716,4.78712778291916,5.11469700639233,0.580418477257168,0.56738522469114,0.622822248995575,2.00998932205395,2.60741459210101,2.82345498116652,0.605399502633369,1.47311054395026,0.316462387440884,0.422510572623884,0.637812899895131,0,0.561643155732475,0.150176892841506,0,0,0.39783335439818,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0.276350017785848,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696518949197069,1.19662164466979,0.953962497221368,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0.492434012174795,0,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0.176096868026452,5.59785911960085,2.59415916150531,4.79721247020244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0,0,0.648473311192717,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0.0897576444097721,0,1.5950057986596,0.641183153813036,2.13213910407454,0,0,1.16348177330109,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0.247127877893006,0.313265848516366,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.797189041880179,0.490696182767533,0,0,0,0.19998739585493,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:37319278..37319288,+ | |short_description=p@chr22:37319278..37319288,+ | ||
}} | }} |
Latest revision as of 20:51, 28 July 2015
Short description: | p@chr22:37319278..37319288, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:37319278..37319288, + |
Coexpression cluster: | C1581_CD14_Basophils_Neutrophils_Eosinophils_Mast_Dendritic_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-29 | 76 |
bone element | 5.74e-27 | 82 |
hematopoietic system | 9.35e-25 | 98 |
blood island | 9.35e-25 | 98 |
skeletal element | 2.61e-24 | 90 |
immune system | 1.98e-23 | 93 |
hemolymphoid system | 3.59e-22 | 108 |
skeletal system | 1.40e-21 | 100 |
musculoskeletal system | 1.19e-11 | 167 |
egg chorion | 3.60e-11 | 3 |
lateral plate mesoderm | 3.16e-10 | 203 |
connective tissue | 5.57e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 9.17e-09 | 1 |