FFCP PHASE1:Hg19::chr22:50753272..50753308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:50753272..50753308,- | |||
|description=CAGE_peak_at_chr22:50753272..50753308,- | |description=CAGE_peak_at_chr22:50753272..50753308,- | ||
|id=chr22:50753272..50753308,- | |id=chr22:50753272..50753308,- | ||
|ontology_enrichment_celltype=CL:0000988!1.54e-39!182;CL:0000037!4.77e-38!172;CL:0000566!4.77e-38!172;CL:0002032!5.33e-36!165;CL:0000837!5.33e-36!165;CL:0002087!2.62e-28!119;CL:0000738!1.69e-26!140;CL:0002031!9.97e-26!124;CL:0002057!2.51e-20!42;CL:0000763!1.07e-19!112;CL:0000049!1.07e-19!112;CL:0000860!5.41e-19!45;CL:0000542!1.98e-15!53;CL:0000051!1.98e-15!53;CL:0000838!8.68e-15!52;CL:0000557!7.92e-13!71;CL:0000839!3.01e-12!70;CL:0000945!4.18e-12!24;CL:0000826!4.18e-12!24;CL:0002194!8.76e-12!63;CL:0000576!8.76e-12!63;CL:0000040!8.76e-12!63;CL:0000559!8.76e-12!63;CL:0000766!4.71e-11!76;CL:0002009!4.90e-11!65;CL:0000134!5.11e-07!358 | |ontology_enrichment_celltype=CL:0000988!1.54e-39!182;CL:0000037!4.77e-38!172;CL:0000566!4.77e-38!172;CL:0002032!5.33e-36!165;CL:0000837!5.33e-36!165;CL:0002087!2.62e-28!119;CL:0000738!1.69e-26!140;CL:0002031!9.97e-26!124;CL:0002057!2.51e-20!42;CL:0000763!1.07e-19!112;CL:0000049!1.07e-19!112;CL:0000860!5.41e-19!45;CL:0000542!1.98e-15!53;CL:0000051!1.98e-15!53;CL:0000838!8.68e-15!52;CL:0000557!7.92e-13!71;CL:0000839!3.01e-12!70;CL:0000945!4.18e-12!24;CL:0000826!4.18e-12!24;CL:0002194!8.76e-12!63;CL:0000576!8.76e-12!63;CL:0000040!8.76e-12!63;CL:0000559!8.76e-12!63;CL:0000766!4.71e-11!76;CL:0002009!4.90e-11!65;CL:0000134!5.11e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000945;8.12e-17;24!CL:0002188;2.41e-10;5!CL:0000542;1.38e-09;53!CL:0000860;6.74e-08;33!CL:0002057;6.74e-08;33!CL:1000746;2.20e-07;7!CL:1000612;2.20e-07;7!CL:0002087;3.99e-07;104 | |ontology_enrichment_celltype_v019=CL:0000945;8.12e-17;24!CL:0002188;2.41e-10;5!CL:0000542;1.38e-09;53!CL:0000860;6.74e-08;33!CL:0002057;6.74e-08;33!CL:1000746;2.20e-07;7!CL:1000612;2.20e-07;7!CL:0002087;3.99e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.05e-27,177;CL:0002032,1.71e-24,161;CL:0000837,1.71e-24,161;CL:0000037,2.16e-24,168;CL:0002087,2.82e-20,115;CL:0002031,4.39e-19,120;CL:0000838,2.88e-17,52;CL:0000738,4.84e-17,136;CL:0000542,7.57e-17,53;CL:0000051,7.57e-17,53;CL:0000945,8.27e-17,24;CL:0000826,8.27e-17,24;CL:0000860,1.92e-10,42;CL:0002057,1.92e-10,42;CL:0002188,1.95e-10,5;CL:0000763,1.10e-09,108;CL:0000049,1.10e-09,108;CL:0000473,9.36e-09,48;CL:0000234,9.36e-09,48;CL:1000746,1.90e-07,7;CL:1000612,1.90e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000051;1.38e-09;53!CL:0002057;3.80e-08;42 | |ontology_enrichment_development_v019=CL:0000051;1.38e-09;53!CL:0002057;3.80e-08;42 | ||
|ontology_enrichment_disease=DOID:2531!2.81e-17!51;DOID:0060083!2.81e-17!51;DOID:1240!7.42e-13!39;DOID:8692!4.05e-10!31;DOID:0060058!1.54e-07!10 | |ontology_enrichment_disease=DOID:2531!2.81e-17!51;DOID:0060083!2.81e-17!51;DOID:1240!7.42e-13!39;DOID:8692!4.05e-10!31;DOID:0060058!1.54e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;1.43e-11;10!DOID:2531;6.52e-09;51!DOID:0060083;6.52e-09;51 | |ontology_enrichment_disease_v019=DOID:0060058;1.43e-11;10!DOID:2531;6.52e-09;51!DOID:0060083;6.52e-09;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,4.68e-14,51;DOID:0060083,4.68e-14,51;DOID:0060058,1.49e-11,10;DOID:1240,1.47e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.06e-16!112;UBERON:0002390!1.39e-14!102;UBERON:0003061!1.39e-14!102;UBERON:0002405!7.39e-13!115;UBERON:0002371!1.40e-11!80;UBERON:0001474!8.63e-10!86 | |ontology_enrichment_uberon=UBERON:0002193!1.06e-16!112;UBERON:0002390!1.39e-14!102;UBERON:0003061!1.39e-14!102;UBERON:0002405!7.39e-13!115;UBERON:0002371!1.40e-11!80;UBERON:0001474!8.63e-10!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.20e-07;7!UBERON:0001229;2.20e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000074;2.20e-07;7!UBERON:0001229;2.20e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.19e-08,108;UBERON:0002390,4.65e-08,98;UBERON:0003061,4.65e-08,98;UBERON:0002405,1.42e-07,93;UBERON:0010532,1.90e-07,7;UBERON:0000074,1.90e-07,7;UBERON:0001229,1.90e-07,7;UBERON:0001230,1.90e-07,7;UBERON:0003220,1.90e-07,7;UBERON:0005749,1.90e-07,7;UBERON:0004199,1.90e-07,7;UBERON:0004209,1.90e-07,7;UBERON:0004198,1.90e-07,7;UBERON:0002371,5.53e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,2.70931945184821,2.12519109546934,0,0,1.08371286321253,0,0.30120591877825,0,6.73964645048624,1.27952309238679,1.46800219667424,2.21598163412751,1.40381113229099,2.38711957787437,0.223915474239924,0,0,1.01778767145695,1.51150377475524,2.42584061187816,1.16214518452842,1.23350366406548,0.929119112685311,0.28769239232215,0.512321413058201,0.236482229888585,0,0.645484683583826,0,0.941211697713023,0.272906150057846,1.34834090667051,0.918251677112708,1.28371610830437,0.639337125799041,0,0.199463657621632,0.852449501065388,0.290209238628584,0,1.86846674698672,0.251248665256743,1.5644487552606,1.73751075764093,0.605399502633369,1.47311054395026,0.316462387440884,0.422510572623884,0,0.209658645508376,0.112328631146495,0.450530678524519,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0,0.954053754535364,0,2.34894875748376,3.05818582500183,5.28685314316103,1.68152568894461,1.58030450865046,0,1.17903228824749,0.822405995998037,0.334372990781356,0.32592226663359,0,0,0.445641827540694,0,0,0,0.25618263945135,0.650296737799391,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0.950452044448374,0,0,0,0,0,1.00803371612366,0.534880391567015,0.868946423296794,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0.516833518338658,0,0.33472061276467,0,0.760272105718513,0,0,1.62028389576352,0.0892997282840798,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0.44024217006613,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0.197030760201927,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,3.4120015221269,1.36074964221213,1.72732732881711,7.71136263451447,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0.330569830721956,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0.929015875628594,0.577076851905779,0.213425530045242,0,0,2.2980644415884,2.32840940996271,0,4.21195767170188,3.42352018549788,0.313359791546046,0,2.53937666702405,0.642352300414798,0.403599414382095,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.586164286206121,0.278406173895242,0,0,0.33307196799782,2.81974010175699,0,0,0,3.67763168115679,0,0,0,0,0,0,0.222617410045812,20.4356804041182,0,0.19924798825107,3.03912307084262,0,0.102268682502155,1.6001024709939,0,0.0898683511473268,0,1.53471711068062,0.197286811273867,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8837630767403,0.664846727600626,0.451191321234361,0.19606253431774,0.335643173951685,0.189753732724185,0.476809736941136,0.210998064528027,0,0,0,0,0.353830258013357,0,2.96521128680622,2.71840665682306,3.65476823269094,0,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,2.27687636823834,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0.801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,1.27746588066972,0,2.36598618851383,0,0,0.717873024576814,0,0,0,0,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0,0.76205998859206,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,1.08599920350743,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0.828478110694391,1.48849806543585,3.557009374163,5.9678373206639,0,0,0,0,0,0,1.77213635993397,0.122026264901963,0,0,0,0.0620964029413835,0,0.499921631848426,0,0,1.6468607378872,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.163565394255844,0,0,0,6.59958406321269,0.106691729694141,3.96094453219876,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0.0691572524642179,0,1.42769420259154,0.0981477185010256,0,0,1.27078232765372,0,0,0,0.376051641746286,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.227662191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| ||
|short_description=p@chr22:50753272..50753308,- | |short_description=p@chr22:50753272..50753308,- | ||
}} | }} |
Latest revision as of 22:28, 28 July 2015
Short description: | p@chr22:50753272..50753308, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50753272..50753308, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.05e-27 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-24 | 161 |
hematopoietic stem cell | 2.16e-24 | 168 |
nongranular leukocyte | 2.82e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 4.39e-19 | 120 |
lymphoid lineage restricted progenitor cell | 2.88e-17 | 52 |
leukocyte | 4.84e-17 | 136 |
lymphocyte | 7.57e-17 | 53 |
common lymphoid progenitor | 7.57e-17 | 53 |
lymphocyte of B lineage | 8.27e-17 | 24 |
pro-B cell | 8.27e-17 | 24 |
classical monocyte | 1.92e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-10 | 42 |
glomerular endothelial cell | 1.95e-10 | 5 |
myeloid cell | 1.10e-09 | 108 |
common myeloid progenitor | 1.10e-09 | 108 |
defensive cell | 9.36e-09 | 48 |
phagocyte | 9.36e-09 | 48 |
glomerular cell | 1.90e-07 | 7 |
kidney corpuscule cell | 1.90e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.19e-08 | 108 |
hematopoietic system | 4.65e-08 | 98 |
blood island | 4.65e-08 | 98 |
immune system | 1.42e-07 | 93 |
primitive nephron | 1.90e-07 | 7 |
renal glomerulus | 1.90e-07 | 7 |
renal corpuscle | 1.90e-07 | 7 |
glomerular capsule | 1.90e-07 | 7 |
metanephric mesenchyme | 1.90e-07 | 7 |
glomerular tuft | 1.90e-07 | 7 |
S-shaped body | 1.90e-07 | 7 |
renal vesicle | 1.90e-07 | 7 |
comma-shaped body | 1.90e-07 | 7 |
bone marrow | 5.53e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.68e-14 | 51 |
immune system cancer | 4.68e-14 | 51 |
lymphoma | 1.49e-11 | 10 |
leukemia | 1.47e-07 | 39 |