FFCP PHASE1:Hg19::chr2:105489050..105489063,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000434764_5end | |association_with_transcript=0bp_to_ENST00000434764_5end | ||
|cluster_id=chr2:105489050..105489063,- | |||
|description=CAGE_peak_1_at_ENST00000434764_5end | |description=CAGE_peak_1_at_ENST00000434764_5end | ||
|id=chr2:105489050..105489063,- | |id=chr2:105489050..105489063,- | ||
|ontology_enrichment_celltype=CL:1000507!3.62e-14!12;CL:1000494!3.62e-14!12;CL:1000449!4.81e-10!16;CL:1000497!1.11e-08!18;CL:0002518!1.11e-08!18;CL:0002319!3.36e-08!25;CL:0002605!2.94e-07!3;CL:0000128!6.43e-07!7;CL:0000126!6.43e-07!7;CL:0000127!6.43e-07!7;CL:0002453!6.43e-07!7 | |ontology_enrichment_celltype=CL:1000507!3.62e-14!12;CL:1000494!3.62e-14!12;CL:1000449!4.81e-10!16;CL:1000497!1.11e-08!18;CL:0002518!1.11e-08!18;CL:0002319!3.36e-08!25;CL:0002605!2.94e-07!3;CL:0000128!6.43e-07!7;CL:0000126!6.43e-07!7;CL:0000127!6.43e-07!7;CL:0002453!6.43e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.65e-11;3!CL:0002319;1.07e-08;25!CL:1000507;4.14e-08;10!CL:1000494;4.14e-08;10!CL:0002367;5.19e-08;2!CL:0000047;7.94e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,4.13e-11,3;CL:0000047,1.16e-10,8;CL:0002319,8.89e-09,25;CL:1000507,3.88e-08,10;CL:1000494,3.88e-08,10;CL:0002367,5.67e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.31e-09;82!UBERON:0007297;1.89e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;8.61e-52;34!UBERON:0003528;5.02e-49;34!UBERON:0002020;5.02e-49;34!UBERON:0002791;1.57e-48;32!UBERON:0001869;2.41e-47;32!UBERON:0002780;1.44e-43;41!UBERON:0001890;1.44e-43;41!UBERON:0000073;6.45e-41;53!UBERON:0002616;6.45e-41;53!UBERON:0000956;1.77e-39;25!UBERON:0000203;1.77e-39;25!UBERON:0002619;5.39e-31;22!UBERON:0001950;4.84e-30;20!UBERON:0001017;1.09e-27;75!UBERON:0000955;1.83e-26;68!UBERON:0000125;2.75e-22;9!UBERON:0002308;2.75e-22;9!UBERON:0001016;2.20e-20;83!UBERON:0002420;2.79e-17;9!UBERON:0007245;2.79e-17;9!UBERON:0010009;2.79e-17;9!UBERON:0010011;2.79e-17;9!UBERON:0000454;2.79e-17;9!UBERON:0009663;1.39e-16;7!UBERON:0002298;1.36e-13;6!UBERON:0000200;8.41e-13;6!UBERON:0006947;7.19e-12;3!UBERON:0004054;7.19e-12;3!UBERON:0001871;3.71e-11;6!UBERON:0007023;1.00e-10;114!UBERON:0000988;3.00e-10;3!UBERON:0001872;3.70e-10;5!UBERON:0004733;3.21e-09;12!UBERON:0002028;3.21e-09;12!UBERON:0005904;5.47e-09;4!UBERON:0004732;1.85e-08;13!UBERON:0011216;2.14e-08;132!UBERON:0004211;4.14e-08;10!UBERON:0009773;4.14e-08;10!UBERON:0001231;4.14e-08;10!UBERON:0004810;4.14e-08;10!UBERON:0001875;5.19e-08;2!UBERON:0005969;5.19e-08;2!UBERON:0006514;5.19e-08;2!UBERON:0003956;5.19e-08;2!UBERON:0001897;1.13e-07;2!UBERON:0010225;1.13e-07;2!UBERON:0000369;1.48e-07;4!UBERON:0002435;1.48e-07;4!UBERON:0000204;1.48e-07;4!UBERON:0002148;1.71e-07;2!UBERON:0006331;1.71e-07;2!UBERON:0009662;1.71e-07;2!UBERON:0002771;3.62e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.50e-69,81;UBERON:0000073,2.38e-68,53;UBERON:0002616,2.38e-68,53;UBERON:0001049,2.86e-68,56;UBERON:0005068,2.86e-68,56;UBERON:0006241,2.86e-68,56;UBERON:0007135,2.86e-68,56;UBERON:0001016,1.13e-61,89;UBERON:0002780,2.46e-61,41;UBERON:0001890,2.46e-61,41;UBERON:0003080,2.46e-61,41;UBERON:0006240,2.46e-61,41;UBERON:0003528,8.26e-60,34;UBERON:0002020,8.26e-60,34;UBERON:0001893,9.12e-60,34;UBERON:0000955,1.38e-57,68;UBERON:0006238,1.38e-57,68;UBERON:0002791,4.92e-54,32;UBERON:0001869,1.09e-53,32;UBERON:0003075,1.05e-49,82;UBERON:0007284,1.05e-49,82;UBERON:0002346,5.78e-47,86;UBERON:0003056,2.99e-45,61;UBERON:0010371,1.23e-39,104;UBERON:0000956,4.00e-39,25;UBERON:0000203,4.00e-39,25;UBERON:0004121,1.50e-32,171;UBERON:0000924,1.50e-32,171;UBERON:0006601,1.50e-32,171;UBERON:0007023,3.90e-32,114;UBERON:0002619,1.07e-30,22;UBERON:0001950,1.22e-29,20;UBERON:0010314,5.11e-29,132;UBERON:0000125,2.08e-22,9;UBERON:0002308,2.08e-22,9;UBERON:0011216,7.62e-21,223;UBERON:0000025,1.02e-20,192;UBERON:0002420,3.61e-17,9;UBERON:0007245,3.61e-17,9;UBERON:0010009,3.61e-17,9;UBERON:0010011,3.61e-17,9;UBERON:0000454,3.61e-17,9;UBERON:0004111,9.42e-17,240;UBERON:0009663,1.61e-16,7;UBERON:0002298,1.48e-13,6;UBERON:0000200,1.49e-12,6;UBERON:0006947,7.10e-12,3;UBERON:0004054,7.10e-12,3;UBERON:0000483,1.13e-11,306;UBERON:0000119,1.86e-11,309;UBERON:0001871,4.87e-11,6;UBERON:0000988,2.92e-10,3;UBERON:0001872,3.20e-10,5;UBERON:0003076,1.10e-09,15;UBERON:0003057,1.10e-09,15;UBERON:0002113,3.54e-09,26;UBERON:0003918,3.54e-09,26;UBERON:0011143,3.54e-09,26;UBERON:0005095,3.54e-09,26;UBERON:0007687,3.54e-09,26;UBERON:0000489,3.67e-09,31;UBERON:0004733,3.81e-09,12;UBERON:0002028,3.81e-09,12;UBERON:0007277,3.81e-09,12;UBERON:0005904,5.42e-09,4;UBERON:0004732,2.17e-08,13;UBERON:0004810,3.88e-08,10;UBERON:0005423,5.21e-08,581;UBERON:0001875,5.67e-08,2;UBERON:0005969,5.67e-08,2;UBERON:0006514,5.67e-08,2;UBERON:0003956,5.67e-08,2;UBERON:0001897,7.96e-08,2;UBERON:0010225,7.96e-08,2;UBERON:0002148,1.04e-07,2;UBERON:0006331,1.04e-07,2;UBERON:0009662,1.04e-07,2;UBERON:0000922,1.28e-07,592;UBERON:0000369,1.60e-07,4;UBERON:0002435,1.60e-07,4;UBERON:0000204,1.60e-07,4;UBERON:0010082,1.60e-07,4;UBERON:0006555,5.00e-07,16;UBERON:0004819,5.00e-07,16;UBERON:0002771,5.32e-07,2 | |||
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|short_description=p1@ENST00000434764 | |short_description=p1@ENST00000434764 | ||
}} | }} |
Latest revision as of 22:58, 28 July 2015
Short description: | p1@ENST00000434764 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000434764_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000434764_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 4.13e-11 | 3 |
neuronal stem cell | 1.16e-10 | 8 |
neural cell | 8.89e-09 | 25 |
kidney tubule cell | 3.88e-08 | 10 |
nephron tubule epithelial cell | 3.88e-08 | 10 |
trabecular meshwork cell | 5.67e-08 | 2 |