FFCP PHASE1:Hg19::chr2:189157368..189157381,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:189157368..189157381,- | |||
|description=CAGE_peak_at_chr2:189157368..189157381,- | |||
|id=chr2:189157368..189157381,- | |||
|ontology_enrichment_celltype=CL:0000066!1.72e-08!254;CL:0002322!4.10e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000239;8.94e-25;3!CL:1000615;8.94e-25;3!CL:0002306;8.94e-25;3!CL:0000540;3.14e-13;6!CL:0000404;3.14e-13;6!CL:0002262;2.72e-10;2!CL:1000398;2.72e-10;2!CL:1000507;4.04e-08;10!CL:1000494;4.04e-08;10!CL:0002178;2.79e-07;3!CL:0002681;6.54e-07;12!CL:0002584;6.54e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.50e-25,3;CL:1000615,5.50e-25,3;CL:0002306,5.50e-25,3;CL:0000540,3.34e-13,6;CL:0000031,3.34e-13,6;CL:0000404,3.34e-13,6;CL:0002262,2.99e-10,2;CL:1000398,2.99e-10,2;CL:0000047,3.85e-10,8;CL:1000507,3.50e-08,10;CL:1000494,3.50e-08,10;CL:0002178,3.35e-07,3;CL:0002681,5.81e-07,12;CL:0002584,5.81e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.08e-19;1!CL:0000031;3.14e-13;6!UBERON:0005795;2.82e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.59e-07!129;UBERON:0004185!8.59e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;8.94e-25;3!UBERON:0007685;8.94e-25;3!UBERON:0004134;8.94e-25;3!UBERON:0000353;2.18e-11;15!UBERON:0001281;2.72e-10;2!UBERON:0003497;2.72e-10;2!UBERON:0003909;2.72e-10;2!UBERON:0003835;2.72e-10;2!UBERON:0004211;4.04e-08;10!UBERON:0009773;4.04e-08;10!UBERON:0001231;4.04e-08;10!UBERON:0004810;4.04e-08;10!UBERON:0001280;2.79e-07;3!UBERON:0004647;2.79e-07;3!UBERON:0001225;6.54e-07;12!UBERON:0008987;6.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,5.50e-25,3;UBERON:0007685,5.50e-25,3;UBERON:0004134,5.50e-25,3;UBERON:0002394,6.12e-13,6;UBERON:0003928,6.12e-13,6;UBERON:0000353,1.96e-11,15;UBERON:0001281,2.99e-10,2;UBERON:0003497,2.99e-10,2;UBERON:0003909,2.99e-10,2;UBERON:0003835,2.99e-10,2;UBERON:0002294,6.11e-09,9;UBERON:0001173,6.11e-09,9;UBERON:0004912,6.11e-09,9;UBERON:0004810,3.50e-08,10;UBERON:0001280,2.97e-07,3;UBERON:0004647,2.97e-07,3;UBERON:0005171,2.97e-07,3;UBERON:0001225,5.81e-07,12;UBERON:0008987,5.81e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0.323292113637624,0,0,0.169560592310488,0.773043412653187,0,0,0.609868530647977,0.265059536642971,0.116193942869518,1.45125477021519,0.756962552626885,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,1.52925763827023,1.66215201785745,0,0,0,0,0,0,0.824328093181778,0.457847324091717,0.577566499444116,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0.445234820091624,0,0,0.398495976502139,0,0,0,0,0,0,1.61119057208048,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,1.00863292007874,0.343609788497747,0.171594997861965,0.432164393964449,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0,0,0,3.05430982083536,3.16340704173638,0.83088067605837,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0.463044948647668,0,0.537266523244462,0,0,0.176689145945881,0,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0.699397538597222,0,0,0.215649622793364,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0.261906694481422,0,0.887136517302272,0,0,0,0,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0,3.72549954683083,0,0,0.0679697329768317,0,0,0.333694205676207,0.235479278551542,0,0,0,0,0.47775168788705,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,2.17144469965024,0,0,0.687051635306701,0.243835849964539,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0.160482733378337,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |||
|short_description=p@chr2:189157368..189157381,- | |||
}} |
Latest revision as of 04:13, 29 July 2015
Short description: | p@chr2:189157368..189157381, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189157368..189157381, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.50e-25 | 3 |
kidney cortex tubule cell | 5.50e-25 | 3 |
epithelial cell of proximal tubule | 5.50e-25 | 3 |
neuron | 3.34e-13 | 6 |
neuroblast | 3.34e-13 | 6 |
electrically signaling cell | 3.34e-13 | 6 |
endothelial cell of sinusoid | 2.99e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.99e-10 | 2 |
neuronal stem cell | 3.85e-10 | 8 |
kidney tubule cell | 3.50e-08 | 10 |
nephron tubule epithelial cell | 3.50e-08 | 10 |
epithelial cell of stomach | 3.35e-07 | 3 |
kidney cortical cell | 5.81e-07 | 12 |
renal cortical epithelial cell | 5.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 5.50e-25 | 3 |
region of nephron tubule | 5.50e-25 | 3 |
proximal tubule | 5.50e-25 | 3 |
bile duct | 6.12e-13 | 6 |
digestive system duct | 6.12e-13 | 6 |
parenchyma | 1.96e-11 | 15 |
hepatic sinusoid | 2.99e-10 | 2 |
abdomen blood vessel | 2.99e-10 | 2 |
sinusoid | 2.99e-10 | 2 |
abdominal segment blood vessel | 2.99e-10 | 2 |
biliary system | 6.11e-09 | 9 |
biliary tree | 6.11e-09 | 9 |
biliary bud | 6.11e-09 | 9 |
nephron tubule epithelium | 3.50e-08 | 10 |
liver parenchyma | 2.97e-07 | 3 |
liver lobule | 2.97e-07 | 3 |
hepatic duct | 2.97e-07 | 3 |
cortex of kidney | 5.81e-07 | 12 |
renal parenchyma | 5.81e-07 | 12 |