FFCP PHASE1:Hg19::chr2:189157368..189157381,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:189157368..189157381,- | |||
|description=CAGE_peak_at_chr2:189157368..189157381,- | |||
|id=chr2:189157368..189157381,- | |||
|ontology_enrichment_celltype=CL:0000066!1.72e-08!254;CL:0002322!4.10e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000239;8.94e-25;3!CL:1000615;8.94e-25;3!CL:0002306;8.94e-25;3!CL:0000540;3.14e-13;6!CL:0000404;3.14e-13;6!CL:0002262;2.72e-10;2!CL:1000398;2.72e-10;2!CL:1000507;4.04e-08;10!CL:1000494;4.04e-08;10!CL:0002178;2.79e-07;3!CL:0002681;6.54e-07;12!CL:0002584;6.54e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.50e-25,3;CL:1000615,5.50e-25,3;CL:0002306,5.50e-25,3;CL:0000540,3.34e-13,6;CL:0000031,3.34e-13,6;CL:0000404,3.34e-13,6;CL:0002262,2.99e-10,2;CL:1000398,2.99e-10,2;CL:0000047,3.85e-10,8;CL:1000507,3.50e-08,10;CL:1000494,3.50e-08,10;CL:0002178,3.35e-07,3;CL:0002681,5.81e-07,12;CL:0002584,5.81e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.08e-19;1!CL:0000031;3.14e-13;6!UBERON:0005795;2.82e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!8.59e-07!129;UBERON:0004185!8.59e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;8.94e-25;3!UBERON:0007685;8.94e-25;3!UBERON:0004134;8.94e-25;3!UBERON:0000353;2.18e-11;15!UBERON:0001281;2.72e-10;2!UBERON:0003497;2.72e-10;2!UBERON:0003909;2.72e-10;2!UBERON:0003835;2.72e-10;2!UBERON:0004211;4.04e-08;10!UBERON:0009773;4.04e-08;10!UBERON:0001231;4.04e-08;10!UBERON:0004810;4.04e-08;10!UBERON:0001280;2.79e-07;3!UBERON:0004647;2.79e-07;3!UBERON:0001225;6.54e-07;12!UBERON:0008987;6.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,5.50e-25,3;UBERON:0007685,5.50e-25,3;UBERON:0004134,5.50e-25,3;UBERON:0002394,6.12e-13,6;UBERON:0003928,6.12e-13,6;UBERON:0000353,1.96e-11,15;UBERON:0001281,2.99e-10,2;UBERON:0003497,2.99e-10,2;UBERON:0003909,2.99e-10,2;UBERON:0003835,2.99e-10,2;UBERON:0002294,6.11e-09,9;UBERON:0001173,6.11e-09,9;UBERON:0004912,6.11e-09,9;UBERON:0004810,3.50e-08,10;UBERON:0001280,2.97e-07,3;UBERON:0004647,2.97e-07,3;UBERON:0005171,2.97e-07,3;UBERON:0001225,5.81e-07,12;UBERON:0008987,5.81e-07,12 | |||
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| ||
|short_description=p@chr2:189157368..189157381,- | |||
}} | }} |
Latest revision as of 04:13, 29 July 2015
Short description: | p@chr2:189157368..189157381, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189157368..189157381, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.50e-25 | 3 |
kidney cortex tubule cell | 5.50e-25 | 3 |
epithelial cell of proximal tubule | 5.50e-25 | 3 |
neuron | 3.34e-13 | 6 |
neuroblast | 3.34e-13 | 6 |
electrically signaling cell | 3.34e-13 | 6 |
endothelial cell of sinusoid | 2.99e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.99e-10 | 2 |
neuronal stem cell | 3.85e-10 | 8 |
kidney tubule cell | 3.50e-08 | 10 |
nephron tubule epithelial cell | 3.50e-08 | 10 |
epithelial cell of stomach | 3.35e-07 | 3 |
kidney cortical cell | 5.81e-07 | 12 |
renal cortical epithelial cell | 5.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 5.50e-25 | 3 |
region of nephron tubule | 5.50e-25 | 3 |
proximal tubule | 5.50e-25 | 3 |
bile duct | 6.12e-13 | 6 |
digestive system duct | 6.12e-13 | 6 |
parenchyma | 1.96e-11 | 15 |
hepatic sinusoid | 2.99e-10 | 2 |
abdomen blood vessel | 2.99e-10 | 2 |
sinusoid | 2.99e-10 | 2 |
abdominal segment blood vessel | 2.99e-10 | 2 |
biliary system | 6.11e-09 | 9 |
biliary tree | 6.11e-09 | 9 |
biliary bud | 6.11e-09 | 9 |
nephron tubule epithelium | 3.50e-08 | 10 |
liver parenchyma | 2.97e-07 | 3 |
liver lobule | 2.97e-07 | 3 |
hepatic duct | 2.97e-07 | 3 |
cortex of kidney | 5.81e-07 | 12 |
renal parenchyma | 5.81e-07 | 12 |