FFCP PHASE1:Hg19::chr2:56412925..56412945,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000432793,uc010fca.1_5end | |association_with_transcript=-20bp_to_ENST00000432793,uc010fca.1_5end | ||
|cluster_id=chr2:56412925..56412945,- | |||
|coexpression_cluster_id=C1237 | |coexpression_cluster_id=C1237 | ||
|description=CAGE_peak_2_at_ENST00000432793_5end,CAGE_peak_2_at_uc010fca.1_5end | |description=CAGE_peak_2_at_ENST00000432793_5end,CAGE_peak_2_at_uc010fca.1_5end | ||
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|ontology_enrichment_celltype=CL:0002139!2.67e-24!24;CL:0000115!1.38e-23!35;CL:0000071!7.76e-19!18;CL:0002546!7.76e-19!18;CL:0000222!2.84e-18!119;CL:0000213!8.42e-18!57;CL:0000215!8.42e-18!57;CL:0002078!2.19e-17!44;CL:1000413!2.42e-10!9;CL:0002544!1.44e-07!6;CL:0002543!1.91e-07!6;CL:0005020!5.17e-07!6;CL:0002138!5.17e-07!6;CL:0005022!5.17e-07!6 | |ontology_enrichment_celltype=CL:0002139!2.67e-24!24;CL:0000115!1.38e-23!35;CL:0000071!7.76e-19!18;CL:0002546!7.76e-19!18;CL:0000222!2.84e-18!119;CL:0000213!8.42e-18!57;CL:0000215!8.42e-18!57;CL:0002078!2.19e-17!44;CL:1000413!2.42e-10!9;CL:0002544!1.44e-07!6;CL:0002543!1.91e-07!6;CL:0005020!5.17e-07!6;CL:0002138!5.17e-07!6;CL:0005022!5.17e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.02e-59;24!CL:0000115;2.94e-53;36!CL:0000071;5.81e-47;18!CL:0002078;1.58e-29;45!CL:1000413;4.91e-27;9!CL:0000213;3.61e-22;58!CL:0000215;3.61e-22;58!CL:0002544;5.46e-19;6!CL:0002543;1.12e-18;6!CL:0002138;2.08e-13;6!CL:0002618;1.23e-10;3!CL:0002188;2.39e-10;5!CL:0002579;1.48e-09;3!CL:0000515;2.02e-09;3!CL:1000746;2.23e-07;7!CL:1000612;2.23e-07;7!CL:0000076;3.04e-07;63!CL:0002545;3.64e-07;2!CL:0000056;3.67e-07;4!CL:0002262;6.08e-07;2!CL:1000398;6.08e-07;2 | |ontology_enrichment_celltype_v019=CL:0002139;8.02e-59;24!CL:0000115;2.94e-53;36!CL:0000071;5.81e-47;18!CL:0002078;1.58e-29;45!CL:1000413;4.91e-27;9!CL:0000213;3.61e-22;58!CL:0000215;3.61e-22;58!CL:0002544;5.46e-19;6!CL:0002543;1.12e-18;6!CL:0002138;2.08e-13;6!CL:0002618;1.23e-10;3!CL:0002188;2.39e-10;5!CL:0002579;1.48e-09;3!CL:0000515;2.02e-09;3!CL:1000746;2.23e-07;7!CL:1000612;2.23e-07;7!CL:0000076;3.04e-07;63!CL:0002545;3.64e-07;2!CL:0000056;3.67e-07;4!CL:0002262;6.08e-07;2!CL:1000398;6.08e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.83e-62,36;CL:0002139,2.56e-59,24;CL:0002078,2.44e-48,45;CL:0000071,1.88e-47,18;CL:0002546,1.88e-47,18;CL:0000213,1.08e-35,58;CL:0000215,1.08e-35,58;CL:1000413,2.46e-27,9;CL:0000222,2.48e-25,121;CL:0002544,3.45e-19,6;CL:0002543,7.90e-19,6;CL:0005020,2.00e-13,6;CL:0002138,2.00e-13,6;CL:0005022,2.00e-13,6;CL:0002321,1.25e-11,250;CL:0002618,1.24e-10,3;CL:0002188,1.54e-10,5;CL:0000076,2.60e-10,63;CL:0002579,1.16e-09,3;CL:1000746,1.65e-07,7;CL:1000612,1.65e-07,7;CL:0002545,2.77e-07,2;CL:0002262,4.95e-07,2;CL:1000398,4.95e-07,2;CL:0000515,8.46e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;5.81e-47;18!CL:0005022;2.08e-13;6!CL:0000222;1.92e-08;121!CL:0000515;3.67e-07;4 | |ontology_enrichment_development_v019=CL:0002546;5.81e-47;18!CL:0005022;2.08e-13;6!CL:0000222;1.92e-08;121!CL:0000515;3.67e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.07e-25!69;UBERON:0001981!8.03e-23!60;UBERON:0007500!8.03e-23!60;UBERON:0004537!8.03e-23!60;UBERON:0006965!8.03e-23!60;UBERON:0002049!8.82e-22!79;UBERON:0007798!8.82e-22!79;UBERON:0004872!5.95e-21!84;UBERON:0001986!7.76e-19!18;UBERON:0004638!7.76e-19!18;UBERON:0004852!7.76e-19!18;UBERON:0000025!2.60e-17!194;UBERON:0004111!4.53e-17!241;UBERON:0003914!1.56e-16!118;UBERON:0001009!1.03e-15!113;UBERON:0000487!2.55e-15!22;UBERON:0004535!1.35e-14!110;UBERON:0000477!4.61e-14!286;UBERON:0001637!8.54e-14!42;UBERON:0003509!8.54e-14!42;UBERON:0004572!8.54e-14!42;UBERON:0006914!1.58e-12!25;UBERON:0000490!1.83e-12!138;UBERON:0000483!2.64e-12!309;UBERON:0000119!7.37e-12!312;UBERON:0004573!1.50e-10!33;UBERON:0004571!1.50e-10!33;UBERON:0003915!2.42e-10!9;UBERON:0004700!2.42e-10!9;UBERON:0001917!2.42e-10!9;UBERON:0000468!1.44e-09!659;UBERON:0000947!1.88e-09!21;UBERON:0010191!1.88e-09!21;UBERON:0000475!1.12e-08!365;UBERON:0002100!7.35e-08!216;UBERON:0000467!1.58e-07!625;UBERON:0000480!1.96e-07!626;UBERON:0001638!4.48e-07!9;UBERON:0003920!4.48e-07!9;UBERON:0004582!4.48e-07!9;UBERON:0007023!9.81e-07!115 | |ontology_enrichment_uberon=UBERON:0000055!1.07e-25!69;UBERON:0001981!8.03e-23!60;UBERON:0007500!8.03e-23!60;UBERON:0004537!8.03e-23!60;UBERON:0006965!8.03e-23!60;UBERON:0002049!8.82e-22!79;UBERON:0007798!8.82e-22!79;UBERON:0004872!5.95e-21!84;UBERON:0001986!7.76e-19!18;UBERON:0004638!7.76e-19!18;UBERON:0004852!7.76e-19!18;UBERON:0000025!2.60e-17!194;UBERON:0004111!4.53e-17!241;UBERON:0003914!1.56e-16!118;UBERON:0001009!1.03e-15!113;UBERON:0000487!2.55e-15!22;UBERON:0004535!1.35e-14!110;UBERON:0000477!4.61e-14!286;UBERON:0001637!8.54e-14!42;UBERON:0003509!8.54e-14!42;UBERON:0004572!8.54e-14!42;UBERON:0006914!1.58e-12!25;UBERON:0000490!1.83e-12!138;UBERON:0000483!2.64e-12!309;UBERON:0000119!7.37e-12!312;UBERON:0004573!1.50e-10!33;UBERON:0004571!1.50e-10!33;UBERON:0003915!2.42e-10!9;UBERON:0004700!2.42e-10!9;UBERON:0001917!2.42e-10!9;UBERON:0000468!1.44e-09!659;UBERON:0000947!1.88e-09!21;UBERON:0010191!1.88e-09!21;UBERON:0000475!1.12e-08!365;UBERON:0002100!7.35e-08!216;UBERON:0000467!1.58e-07!625;UBERON:0000480!1.96e-07!626;UBERON:0001638!4.48e-07!9;UBERON:0003920!4.48e-07!9;UBERON:0004582!4.48e-07!9;UBERON:0007023!9.81e-07!115 | ||
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| ||
|short_description=p2@ENST00000432793,p2@uc010fca.1 | |short_description=p2@ENST00000432793,p2@uc010fca.1 | ||
}} | }} |
Latest revision as of 11:03, 29 July 2015
Short description: | p2@ENST00000432793, p2@uc010fca.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000432793_5end, CAGE_peak_2_at_uc010fca.1_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | -20bp_to_ENST00000432793, uc010fca.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.83e-62 | 36 |
endothelial cell of vascular tree | 2.56e-59 | 24 |
meso-epithelial cell | 2.44e-48 | 45 |
blood vessel endothelial cell | 1.88e-47 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-47 | 18 |
lining cell | 1.08e-35 | 58 |
barrier cell | 1.08e-35 | 58 |
endothelial cell of artery | 2.46e-27 | 9 |
mesodermal cell | 2.48e-25 | 121 |
aortic endothelial cell | 3.45e-19 | 6 |
vein endothelial cell | 7.90e-19 | 6 |
lymphangioblast | 2.00e-13 | 6 |
endothelial cell of lymphatic vessel | 2.00e-13 | 6 |
vascular lymphangioblast | 2.00e-13 | 6 |
embryonic cell | 1.25e-11 | 250 |
endothelial cell of umbilical vein | 1.24e-10 | 3 |
glomerular endothelial cell | 1.54e-10 | 5 |
squamous epithelial cell | 2.60e-10 | 63 |
omentum preadipocyte | 1.16e-09 | 3 |
glomerular cell | 1.65e-07 | 7 |
kidney corpuscule cell | 1.65e-07 | 7 |
thoracic aorta endothelial cell | 2.77e-07 | 2 |
endothelial cell of sinusoid | 4.95e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.95e-07 | 2 |
skeletal muscle myoblast | 8.46e-07 | 4 |