FFCP PHASE1:Hg19::chr2:56412925..56412945,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:56412925..56412945,-
|short_description=p2@ENST00000432793,p2@uc010fca.1
|description=CAGE_peak_2_at_ENST00000432793_5end,CAGE_peak_2_at_uc010fca.1_5end
|a...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000432793,uc010fca.1_5end | |||
|cluster_id=chr2:56412925..56412945,- | |||
|coexpression_cluster_id=C1237 | |||
|description=CAGE_peak_2_at_ENST00000432793_5end,CAGE_peak_2_at_uc010fca.1_5end | |||
|id=chr2:56412925..56412945,- | |||
|ontology_enrichment_celltype=CL:0002139!2.67e-24!24;CL:0000115!1.38e-23!35;CL:0000071!7.76e-19!18;CL:0002546!7.76e-19!18;CL:0000222!2.84e-18!119;CL:0000213!8.42e-18!57;CL:0000215!8.42e-18!57;CL:0002078!2.19e-17!44;CL:1000413!2.42e-10!9;CL:0002544!1.44e-07!6;CL:0002543!1.91e-07!6;CL:0005020!5.17e-07!6;CL:0002138!5.17e-07!6;CL:0005022!5.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.02e-59;24!CL:0000115;2.94e-53;36!CL:0000071;5.81e-47;18!CL:0002078;1.58e-29;45!CL:1000413;4.91e-27;9!CL:0000213;3.61e-22;58!CL:0000215;3.61e-22;58!CL:0002544;5.46e-19;6!CL:0002543;1.12e-18;6!CL:0002138;2.08e-13;6!CL:0002618;1.23e-10;3!CL:0002188;2.39e-10;5!CL:0002579;1.48e-09;3!CL:0000515;2.02e-09;3!CL:1000746;2.23e-07;7!CL:1000612;2.23e-07;7!CL:0000076;3.04e-07;63!CL:0002545;3.64e-07;2!CL:0000056;3.67e-07;4!CL:0002262;6.08e-07;2!CL:1000398;6.08e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.83e-62,36;CL:0002139,2.56e-59,24;CL:0002078,2.44e-48,45;CL:0000071,1.88e-47,18;CL:0002546,1.88e-47,18;CL:0000213,1.08e-35,58;CL:0000215,1.08e-35,58;CL:1000413,2.46e-27,9;CL:0000222,2.48e-25,121;CL:0002544,3.45e-19,6;CL:0002543,7.90e-19,6;CL:0005020,2.00e-13,6;CL:0002138,2.00e-13,6;CL:0005022,2.00e-13,6;CL:0002321,1.25e-11,250;CL:0002618,1.24e-10,3;CL:0002188,1.54e-10,5;CL:0000076,2.60e-10,63;CL:0002579,1.16e-09,3;CL:1000746,1.65e-07,7;CL:1000612,1.65e-07,7;CL:0002545,2.77e-07,2;CL:0002262,4.95e-07,2;CL:1000398,4.95e-07,2;CL:0000515,8.46e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;5.81e-47;18!CL:0005022;2.08e-13;6!CL:0000222;1.92e-08;121!CL:0000515;3.67e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.07e-25!69;UBERON:0001981!8.03e-23!60;UBERON:0007500!8.03e-23!60;UBERON:0004537!8.03e-23!60;UBERON:0006965!8.03e-23!60;UBERON:0002049!8.82e-22!79;UBERON:0007798!8.82e-22!79;UBERON:0004872!5.95e-21!84;UBERON:0001986!7.76e-19!18;UBERON:0004638!7.76e-19!18;UBERON:0004852!7.76e-19!18;UBERON:0000025!2.60e-17!194;UBERON:0004111!4.53e-17!241;UBERON:0003914!1.56e-16!118;UBERON:0001009!1.03e-15!113;UBERON:0000487!2.55e-15!22;UBERON:0004535!1.35e-14!110;UBERON:0000477!4.61e-14!286;UBERON:0001637!8.54e-14!42;UBERON:0003509!8.54e-14!42;UBERON:0004572!8.54e-14!42;UBERON:0006914!1.58e-12!25;UBERON:0000490!1.83e-12!138;UBERON:0000483!2.64e-12!309;UBERON:0000119!7.37e-12!312;UBERON:0004573!1.50e-10!33;UBERON:0004571!1.50e-10!33;UBERON:0003915!2.42e-10!9;UBERON:0004700!2.42e-10!9;UBERON:0001917!2.42e-10!9;UBERON:0000468!1.44e-09!659;UBERON:0000947!1.88e-09!21;UBERON:0010191!1.88e-09!21;UBERON:0000475!1.12e-08!365;UBERON:0002100!7.35e-08!216;UBERON:0000467!1.58e-07!625;UBERON:0000480!1.96e-07!626;UBERON:0001638!4.48e-07!9;UBERON:0003920!4.48e-07!9;UBERON:0004582!4.48e-07!9;UBERON:0007023!9.81e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.81e-47;18!UBERON:0001986;5.81e-47;18!UBERON:0004852;5.81e-47;18!UBERON:0000487;1.47e-37;22!UBERON:0006914;1.75e-32;25!UBERON:0003915;4.91e-27;9!UBERON:0004700;4.91e-27;9!UBERON:0001917;4.91e-27;9!UBERON:0000490;7.27e-24;33!UBERON:0007500;5.48e-19;56!UBERON:0001981;5.48e-19;56!UBERON:0004537;5.48e-19;56!UBERON:0000055;2.01e-18;65!UBERON:0003914;8.10e-14;74!UBERON:0001637;4.54e-13;42!UBERON:0003509;4.54e-13;42!UBERON:0004572;4.54e-13;42!UBERON:0004573;1.91e-12;33!UBERON:0004571;1.91e-12;33!UBERON:0001638;3.42e-12;9!UBERON:0003920;3.42e-12;9!UBERON:0004582;3.42e-12;9!UBERON:0002049;5.21e-12;75!UBERON:0007798;5.21e-12;75!UBERON:0000947;1.61e-10;21!UBERON:0010191;1.61e-10;21!UBERON:0003513;3.71e-10;7!UBERON:0000025;3.97e-10;93!UBERON:0001473;6.01e-10;8!UBERON:0004536;6.01e-10;8!UBERON:0006558;6.01e-10;8!UBERON:0001009;4.56e-08;112!UBERON:0003688;5.08e-08;6!UBERON:0002358;5.08e-08;6!UBERON:0003684;5.08e-08;6!UBERON:0001178;5.08e-08;6!UBERON:0002465;7.20e-08;10!UBERON:0000074;2.23e-07;7!UBERON:0001229;2.23e-07;7!UBERON:0005800;3.64e-07;2!UBERON:0001515;3.64e-07;2!UBERON:0004535;3.70e-07;109!UBERON:0001281;6.08e-07;2!UBERON:0003497;6.08e-07;2!UBERON:0003909;6.08e-07;2!UBERON:0003835;6.08e-07;2!UBERON:0000353;8.01e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.88e-47,18;UBERON:0001986,1.88e-47,18;UBERON:0004852,1.88e-47,18;UBERON:0000487,5.93e-38,22;UBERON:0000055,8.02e-36,68;UBERON:0006914,7.92e-33,25;UBERON:0002049,4.05e-30,78;UBERON:0007798,4.05e-30,78;UBERON:0007500,1.68e-28,59;UBERON:0001981,1.68e-28,59;UBERON:0004537,1.68e-28,59;UBERON:0006965,1.68e-28,59;UBERON:0003915,2.46e-27,9;UBERON:0004700,2.46e-27,9;UBERON:0001917,2.46e-27,9;UBERON:0004872,1.99e-23,83;UBERON:0004535,1.26e-20,109;UBERON:0001009,7.63e-20,112;UBERON:0003914,1.81e-18,117;UBERON:0001637,1.40e-14,42;UBERON:0003509,1.40e-14,42;UBERON:0004572,1.40e-14,42;UBERON:0004573,1.40e-12,33;UBERON:0004571,1.40e-12,33;UBERON:0001638,2.73e-12,9;UBERON:0003920,2.73e-12,9;UBERON:0004582,2.73e-12,9;UBERON:0000490,1.83e-11,148;UBERON:0000947,1.56e-10,21;UBERON:0010191,1.56e-10,21;UBERON:0003513,3.45e-10,7;UBERON:0001473,5.83e-10,8;UBERON:0004536,5.83e-10,8;UBERON:0006558,5.83e-10,8;UBERON:0000025,1.48e-09,192;UBERON:0004111,1.59e-09,240;UBERON:0003081,2.51e-09,203;UBERON:0003688,4.43e-08,6;UBERON:0002358,4.43e-08,6;UBERON:0003684,4.43e-08,6;UBERON:0001178,4.43e-08,6;UBERON:0002465,7.03e-08,10;UBERON:0000926,1.26e-07,315;UBERON:0004120,1.26e-07,315;UBERON:0006603,1.26e-07,315;UBERON:0010532,1.65e-07,7;UBERON:0000074,1.65e-07,7;UBERON:0001229,1.65e-07,7;UBERON:0001230,1.65e-07,7;UBERON:0003220,1.65e-07,7;UBERON:0005749,1.65e-07,7;UBERON:0004199,1.65e-07,7;UBERON:0004209,1.65e-07,7;UBERON:0004198,1.65e-07,7;UBERON:0005800,2.77e-07,2;UBERON:0001515,2.77e-07,2;UBERON:0001281,4.95e-07,2;UBERON:0003497,4.95e-07,2;UBERON:0003909,4.95e-07,2;UBERON:0003835,4.95e-07,2;UBERON:0000353,6.09e-07,15 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0.845726424575827,0,1.34088328328186,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0,0,0,0.351339142772504,0.458426764241994,0,0,0,0.348259474598534,0.531831842075461,0,0,0,2.78267370313387,4.30117297553062,4.85996702250632,3.95715559346807,1.67799774483962,2.20094433552054,2.50793959844173,4.13466814670926,7.47109151642091,7.36385348082274,4.43112248820062,0.760272105718513,2.92874469057803,4.77962004449629,1.62028389576352,4.82218532734031,3.36794058939255,3.15312145353302,1.53316637465883,2.84779697870439,2.74802615895611,0,0,0.436094052142534,0,2.02608818663328,0.794455084879313,0.286836620748814,0,0,0,1.48000529050296,0,0.404132016209064,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,1.61450672119976,0.213557388818567,0,1.20036438433761,0.824420233907511,0,0.37223371266318,0.675105328965065,0.487185025805993,0.504867548488229,0.0920498986422993,1.13152239773168,0.355009592516614,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.234817388471643,1.58803092537181,0.462985512576611,2.28304982681518,0,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,1.03417372606222,0,0,1.06375246633948,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,2.02693829334611,1.02738161275192,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07970861530807,1.42743191037729,1.26161932027148,0.702848489956279,0,0,1.03473071292505,0.664225598535437,0,0,0,0,0,0,0,0,1.66435439510497,0,3.47350930946288,0.61384789315225,1.12264037773229,1.15325234330131,3.58195074346692,1.93024705372329,0,0,0,0,0,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,4.54933536283586,1.87103075804167,2.80690690932781,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,1.44257416306811,0,0,0,0,0,0.096670718292122,0,0,0,0.322260734604821,0,0,0,0,0,0.127612712494584,0,0.929691098594572,1.25924938732256,0,0,0,0.869932992075073,0.74129687641568,0.429374660225974,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0.823611089208164,0.117812402345686,0.202182481573316,0,1.26377536871694,0,0,1.05650146756755,0.272999822815972,0.282810863907425,0,0,1.32687795048244,1.75380354101505,0,0,0.608731130888112,0.6196469961995,0,0.860468113224309,0.196498082026242,0.7133421029625,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.562677665642051,0,0,0.211125408127993,0.398495976502139,0.552567831062295,0,0,0,0.933118762985422,0,0.895105873378046,0,0.197286811273867,0,0,0,0.278304294485554,1.99613798001194,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0.173624994933292,1.77148277162768,0,0,0,0,0.438770794307945,0.10893846351899,0.139423744278603,0.538651809526579,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0.379119477770928,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0.114536596165916,0,0,0,0,0.271808412147228,0.523014231561666,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0.446342914883745,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.262272940674991,0.105600336519406,0,0.575745591958336,0,0,0,1.62899880526114,0,0.979762080328227,1.19730191562487,0,2.21504428321048,0,0,0,0,0,0.171086837884329,0,0.854299300541557,1.41483874589699,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0,0,0,0.558867626472451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0,0.53168342911599,0,0,0,0,0,0.429642228169954,0,0.398095888698616,0.400027764663154,0.343395705182793,0.336749488765919,0,0.770479321629213,0,0,0.226705925512272,0.231522474323834,0.244736704506468,0.71635536432595,0,0,0,0.192914038270915,0.844712203265363,0.512483037175893,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,1.70254786070051,0,0,0,0.127894371303652,1.72519698234691,0,0,0.169732529954025,0,0,0,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0.385375350578757,0,0,0.205116364240755,0.252071696221718,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0.818859587550484,0,0.20261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| ||
|short_description=p2@ENST00000432793,p2@uc010fca.1 | |||
}} | }} |
Latest revision as of 11:03, 29 July 2015
Short description: | p2@ENST00000432793, p2@uc010fca.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000432793_5end, CAGE_peak_2_at_uc010fca.1_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | -20bp_to_ENST00000432793, uc010fca.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.83e-62 | 36 |
endothelial cell of vascular tree | 2.56e-59 | 24 |
meso-epithelial cell | 2.44e-48 | 45 |
blood vessel endothelial cell | 1.88e-47 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-47 | 18 |
lining cell | 1.08e-35 | 58 |
barrier cell | 1.08e-35 | 58 |
endothelial cell of artery | 2.46e-27 | 9 |
mesodermal cell | 2.48e-25 | 121 |
aortic endothelial cell | 3.45e-19 | 6 |
vein endothelial cell | 7.90e-19 | 6 |
lymphangioblast | 2.00e-13 | 6 |
endothelial cell of lymphatic vessel | 2.00e-13 | 6 |
vascular lymphangioblast | 2.00e-13 | 6 |
embryonic cell | 1.25e-11 | 250 |
endothelial cell of umbilical vein | 1.24e-10 | 3 |
glomerular endothelial cell | 1.54e-10 | 5 |
squamous epithelial cell | 2.60e-10 | 63 |
omentum preadipocyte | 1.16e-09 | 3 |
glomerular cell | 1.65e-07 | 7 |
kidney corpuscule cell | 1.65e-07 | 7 |
thoracic aorta endothelial cell | 2.77e-07 | 2 |
endothelial cell of sinusoid | 4.95e-07 | 2 |
endothelial cell of hepatic sinusoid | 4.95e-07 | 2 |
skeletal muscle myoblast | 8.46e-07 | 4 |