FFCP PHASE1:Hg19::chr3:124860643..124860654,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:124860643..124860654,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr3:124860643..124860654,- | |description=CAGE_peak_at_chr3:124860643..124860654,- | ||
|id=chr3:124860643..124860654,- | |id=chr3:124860643..124860654,- | ||
|ontology_enrichment_celltype=CL:0002618!5.57e-09!3 | |ontology_enrichment_celltype=CL:0002618!5.57e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.79e-36;33!CL:0002057;4.79e-36;33!CL:0000473;3.20e-26;39!CL:0000234;3.20e-26;39!CL:0000576;1.54e-20;48!CL:0002581;1.22e-17;1!CL:0002591;1.22e-17;1!CL:0000766;7.76e-09;69!CL:0002564;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-31,42;CL:0002057,2.43e-31,42;CL:0000473,2.33e-27,48;CL:0000234,2.33e-27,48;CL:0002194,8.93e-22,59;CL:0000576,8.93e-22,59;CL:0000040,8.93e-22,59;CL:0000559,8.93e-22,59;CL:0002009,4.70e-21,61;CL:0000839,1.94e-19,66;CL:0000557,3.83e-19,67;CL:0000766,8.65e-18,72;CL:0002581,1.22e-17,1;CL:0002591,1.44e-17,1;CL:0000763,1.09e-11,108;CL:0000049,1.09e-11,108;CL:0002087,6.13e-11,115;CL:0002031,1.86e-10,120;CL:0000738,3.82e-09,136;CL:0002032,1.31e-07,161;CL:0000837,1.31e-07,161;CL:0000037,2.94e-07,168;CL:0000988,7.55e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.75e-24;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000988!1.44e-08!3;UBERON:0005406!1.72e-07!2 | |ontology_enrichment_uberon=UBERON:0000988!1.44e-08!3;UBERON:0005406!1.72e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.71e-09;2!UBERON:0002012;1.71e-09;2!UBERON:0005406;1.71e-09;2!UBERON:0008886;1.71e-09;2!UBERON:0002242;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,1.86e-17,90;UBERON:0002371,7.84e-17,76;UBERON:0001434,1.18e-15,100;UBERON:0001474,1.44e-15,82;UBERON:0002405,1.15e-13,93;UBERON:0002390,6.09e-13,98;UBERON:0003061,6.09e-13,98;UBERON:0002193,1.09e-11,108;UBERON:0002204,4.46e-11,167;UBERON:0005406,1.71e-09,2;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2;UBERON:0003081,2.60e-07,203 | |||
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| ||
|short_description=p@chr3:124860643..124860654,- | |short_description=p@chr3:124860643..124860654,- | ||
}} | }} |
Latest revision as of 15:17, 29 July 2015
Short description: | p@chr3:124860643..124860654, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:124860643..124860654, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-31 | 42 |
defensive cell | 2.33e-27 | 48 |
phagocyte | 2.33e-27 | 48 |
monopoietic cell | 8.93e-22 | 59 |
monocyte | 8.93e-22 | 59 |
monoblast | 8.93e-22 | 59 |
promonocyte | 8.93e-22 | 59 |
macrophage dendritic cell progenitor | 4.70e-21 | 61 |
myeloid lineage restricted progenitor cell | 1.94e-19 | 66 |
granulocyte monocyte progenitor cell | 3.83e-19 | 67 |
myeloid leukocyte | 8.65e-18 | 72 |
perirenal preadipocyte | 1.22e-17 | 1 |
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
myeloid cell | 1.09e-11 | 108 |
common myeloid progenitor | 1.09e-11 | 108 |
nongranular leukocyte | 6.13e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.86e-10 | 120 |
leukocyte | 3.82e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-07 | 161 |
hematopoietic stem cell | 2.94e-07 | 168 |
hematopoietic cell | 7.55e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 1.86e-17 | 90 |
bone marrow | 7.84e-17 | 76 |
skeletal system | 1.18e-15 | 100 |
bone element | 1.44e-15 | 82 |
immune system | 1.15e-13 | 93 |
hematopoietic system | 6.09e-13 | 98 |
blood island | 6.09e-13 | 98 |
hemolymphoid system | 1.09e-11 | 108 |
musculoskeletal system | 4.46e-11 | 167 |
perirenal fat | 1.71e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |
lateral plate mesoderm | 2.60e-07 | 203 |