FFCP PHASE1:Hg19::chr3:147657737..147657747,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000467198_5end | |association_with_transcript=-43bp_to_ENST00000467198_5end | ||
|cluster_id=chr3:147657737..147657747,+ | |||
|coexpression_cluster_id=C2686 | |coexpression_cluster_id=C2686 | ||
|description=CAGE_peak_2_at_ENST00000467198_5end | |description=CAGE_peak_2_at_ENST00000467198_5end | ||
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|ontology_enrichment_celltype=CL:0000188!1.03e-11!9;CL:0000064!3.67e-11!3;CL:0005012!3.67e-11!3;CL:0000067!3.67e-11!3;CL:0002304!3.67e-11!3;CL:0002605!4.21e-10!3;CL:0002575!8.69e-08!2;CL:0002602!1.51e-07!2;CL:0000128!2.09e-07!7;CL:0000126!2.09e-07!7;CL:0000127!2.09e-07!7;CL:0002453!2.09e-07!7;CL:0000047!7.57e-07!8 | |ontology_enrichment_celltype=CL:0000188!1.03e-11!9;CL:0000064!3.67e-11!3;CL:0005012!3.67e-11!3;CL:0000067!3.67e-11!3;CL:0002304!3.67e-11!3;CL:0002605!4.21e-10!3;CL:0002575!8.69e-08!2;CL:0002602!1.51e-07!2;CL:0000128!2.09e-07!7;CL:0000126!2.09e-07!7;CL:0000127!2.09e-07!7;CL:0002453!2.09e-07!7;CL:0000047!7.57e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.32e-37;2!CL:0000064;4.87e-25;3!CL:0000067;4.87e-25;3!CL:0005012;4.87e-25;3!CL:0002304;4.87e-25;3!CL:0000228;3.56e-19;1!CL:0002372;3.56e-19;1!CL:0002319;5.05e-11;25!CL:0002575;2.85e-10;2!CL:0002605;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0000047;4.32e-37;2!CL:0000064;4.87e-25;3!CL:0000067;4.87e-25;3!CL:0005012;4.87e-25;3!CL:0002304;4.87e-25;3!CL:0000228;3.56e-19;1!CL:0002372;3.56e-19;1!CL:0002319;5.05e-11;25!CL:0002575;2.85e-10;2!CL:0002605;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.38e-25,3;CL:0000067,3.38e-25,3;CL:0005012,3.38e-25,3;CL:0002304,3.38e-25,3;CL:0000047,6.32e-21,8;CL:0000228,2.71e-19,1;CL:0002372,2.71e-19,1;CL:0002319,5.25e-11,25;CL:0000133,1.59e-10,59;CL:0002575,3.58e-10,2;CL:0000221,1.21e-08,72;CL:0002605,3.16e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!2.93e-26!86;UBERON:0007284!2.93e-26!86;UBERON:0005743!2.63e-25!86;UBERON:0001017!5.79e-25!82;UBERON:0002346!9.62e-25!90;UBERON:0000073!3.32e-22!94;UBERON:0001016!3.32e-22!94;UBERON:0001049!1.95e-19!57;UBERON:0005068!1.95e-19!57;UBERON:0006241!1.95e-19!57;UBERON:0007135!1.95e-19!57;UBERON:0005174!2.54e-16!5;UBERON:0001137!2.54e-16!5;UBERON:0004121!2.20e-15!169;UBERON:0003076!6.08e-15!15;UBERON:0003057!6.08e-15!15;UBERON:0000924!7.95e-15!173;UBERON:0006601!7.95e-15!173;UBERON:0002616!9.61e-15!59;UBERON:0000955!4.67e-13!69;UBERON:0006238!4.67e-13!69;UBERON:0003056!1.24e-11!61;UBERON:0001893!1.65e-11!34;UBERON:0001778!3.67e-11!3;UBERON:0001775!3.67e-11!3;UBERON:0002240!1.80e-10!3;UBERON:0002791!3.70e-10!33;UBERON:0002020!8.76e-10!34;UBERON:0003528!8.76e-10!34;UBERON:0000033!9.16e-10!123;UBERON:0000119!3.62e-09!312;UBERON:0002780!4.04e-09!41;UBERON:0001890!4.04e-09!41;UBERON:0006240!4.04e-09!41;UBERON:0000153!4.87e-09!129;UBERON:0007811!4.87e-09!129;UBERON:0002298!4.89e-09!8;UBERON:0003080!7.64e-09!42;UBERON:0001869!9.62e-09!32;UBERON:0000488!1.87e-08!4;UBERON:0004733!2.42e-08!12;UBERON:0002028!2.42e-08!12;UBERON:0007277!2.42e-08!12;UBERON:0000483!5.04e-08!309;UBERON:0002360!1.17e-07!2;UBERON:0000094!1.17e-07!2;UBERON:0007645!1.17e-07!2;UBERON:0004732!1.19e-07!13;UBERON:0009568!1.51e-07!2;UBERON:0002216!1.51e-07!2;UBERON:0002209!1.51e-07!2;UBERON:0002213!1.51e-07!2;UBERON:0004267!1.51e-07!2;UBERON:0006444!1.51e-07!2;UBERON:0001995!1.51e-07!2;UBERON:0004715!1.51e-07!2;UBERON:0001468!1.51e-07!2;UBERON:0001130!1.51e-07!2;UBERON:0001066!1.51e-07!2;UBERON:0007023!3.88e-07!115 | |ontology_enrichment_uberon=UBERON:0003075!2.93e-26!86;UBERON:0007284!2.93e-26!86;UBERON:0005743!2.63e-25!86;UBERON:0001017!5.79e-25!82;UBERON:0002346!9.62e-25!90;UBERON:0000073!3.32e-22!94;UBERON:0001016!3.32e-22!94;UBERON:0001049!1.95e-19!57;UBERON:0005068!1.95e-19!57;UBERON:0006241!1.95e-19!57;UBERON:0007135!1.95e-19!57;UBERON:0005174!2.54e-16!5;UBERON:0001137!2.54e-16!5;UBERON:0004121!2.20e-15!169;UBERON:0003076!6.08e-15!15;UBERON:0003057!6.08e-15!15;UBERON:0000924!7.95e-15!173;UBERON:0006601!7.95e-15!173;UBERON:0002616!9.61e-15!59;UBERON:0000955!4.67e-13!69;UBERON:0006238!4.67e-13!69;UBERON:0003056!1.24e-11!61;UBERON:0001893!1.65e-11!34;UBERON:0001778!3.67e-11!3;UBERON:0001775!3.67e-11!3;UBERON:0002240!1.80e-10!3;UBERON:0002791!3.70e-10!33;UBERON:0002020!8.76e-10!34;UBERON:0003528!8.76e-10!34;UBERON:0000033!9.16e-10!123;UBERON:0000119!3.62e-09!312;UBERON:0002780!4.04e-09!41;UBERON:0001890!4.04e-09!41;UBERON:0006240!4.04e-09!41;UBERON:0000153!4.87e-09!129;UBERON:0007811!4.87e-09!129;UBERON:0002298!4.89e-09!8;UBERON:0003080!7.64e-09!42;UBERON:0001869!9.62e-09!32;UBERON:0000488!1.87e-08!4;UBERON:0004733!2.42e-08!12;UBERON:0002028!2.42e-08!12;UBERON:0007277!2.42e-08!12;UBERON:0000483!5.04e-08!309;UBERON:0002360!1.17e-07!2;UBERON:0000094!1.17e-07!2;UBERON:0007645!1.17e-07!2;UBERON:0004732!1.19e-07!13;UBERON:0009568!1.51e-07!2;UBERON:0002216!1.51e-07!2;UBERON:0002209!1.51e-07!2;UBERON:0002213!1.51e-07!2;UBERON:0004267!1.51e-07!2;UBERON:0006444!1.51e-07!2;UBERON:0001995!1.51e-07!2;UBERON:0004715!1.51e-07!2;UBERON:0001468!1.51e-07!2;UBERON:0001130!1.51e-07!2;UBERON:0001066!1.51e-07!2;UBERON:0007023!3.88e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.87e-25;3!UBERON:0001775;4.87e-25;3!UBERON:0000488;4.70e-19;4!UBERON:0007625;1.64e-15;11!UBERON:0002203;4.80e-13;6!UBERON:0001768;4.80e-13;6!UBERON:0002200;4.80e-13;6!UBERON:0001801;2.48e-12;14!UBERON:0000019;3.02e-09;19!UBERON:0000047;3.02e-09;19!UBERON:0004088;3.02e-09;19!UBERON:0010230;3.02e-09;19!UBERON:0000970;8.19e-09;20!UBERON:0002104;2.02e-08;21!UBERON:0001456;2.02e-08;21!UBERON:0000020;9.77e-08;23!UBERON:0006876;1.56e-07;11!UBERON:0001032;1.95e-07;24!UBERON:0004456;1.95e-07;24!UBERON:0002369;2.25e-07;3!UBERON:0001235;2.25e-07;3!UBERON:0006858;2.25e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001778;4.87e-25;3!UBERON:0001775;4.87e-25;3!UBERON:0000488;4.70e-19;4!UBERON:0007625;1.64e-15;11!UBERON:0002203;4.80e-13;6!UBERON:0001768;4.80e-13;6!UBERON:0002200;4.80e-13;6!UBERON:0001801;2.48e-12;14!UBERON:0000019;3.02e-09;19!UBERON:0000047;3.02e-09;19!UBERON:0004088;3.02e-09;19!UBERON:0010230;3.02e-09;19!UBERON:0000970;8.19e-09;20!UBERON:0002104;2.02e-08;21!UBERON:0001456;2.02e-08;21!UBERON:0000020;9.77e-08;23!UBERON:0006876;1.56e-07;11!UBERON:0001032;1.95e-07;24!UBERON:0004456;1.95e-07;24!UBERON:0002369;2.25e-07;3!UBERON:0001235;2.25e-07;3!UBERON:0006858;2.25e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.38e-25,3;UBERON:0001775,3.38e-25,3;UBERON:0000488,3.57e-19,4;UBERON:0007625,1.45e-15,11;UBERON:0002203,4.01e-13,6;UBERON:0001768,4.01e-13,6;UBERON:0002200,4.01e-13,6;UBERON:0001801,2.26e-12,14;UBERON:0000019,7.66e-09,20;UBERON:0000047,7.66e-09,20;UBERON:0010312,7.66e-09,20;UBERON:0004088,7.66e-09,20;UBERON:0010230,7.66e-09,20;UBERON:0003072,7.66e-09,20;UBERON:0004128,7.66e-09,20;UBERON:0003071,7.66e-09,20;UBERON:0000970,1.90e-08,21;UBERON:0002104,1.90e-08,21;UBERON:0001456,4.34e-08,22;UBERON:0006876,1.42e-07,11;UBERON:0000020,1.84e-07,24;UBERON:0001032,1.84e-07,24;UBERON:0004456,1.84e-07,24;UBERON:0002369,2.32e-07,3;UBERON:0001235,2.32e-07,3;UBERON:0006858,2.32e-07,3 | |||
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|short_description=p2@ENST00000467198 | |short_description=p2@ENST00000467198 | ||
}} | }} |
Latest revision as of 16:47, 29 July 2015
Short description: | p2@ENST00000467198 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000467198_5end |
Coexpression cluster: | C2686_Neural_Ciliary_Astrocyte_neuroblastoma_Lens_teratocarcinoma_Neurons |
Association with transcript: | -43bp_to_ENST00000467198_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.38e-25 | 3 |
ciliated epithelial cell | 3.38e-25 | 3 |
multi-ciliated epithelial cell | 3.38e-25 | 3 |
non-pigmented ciliary epithelial cell | 3.38e-25 | 3 |
neuronal stem cell | 6.32e-21 | 8 |
multinucleate cell | 2.71e-19 | 1 |
myotube | 2.71e-19 | 1 |
neural cell | 5.25e-11 | 25 |
neurectodermal cell | 1.59e-10 | 59 |
central nervous system pericyte | 3.58e-10 | 2 |
ectodermal cell | 1.21e-08 | 72 |
astrocyte of the cerebral cortex | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 3.38e-25 | 3 |
ciliary body | 3.38e-25 | 3 |
atypical epithelium | 3.57e-19 | 4 |
pigment epithelium of eye | 1.45e-15 | 11 |
vasculature of eye | 4.01e-13 | 6 |
uvea | 4.01e-13 | 6 |
vasculature of head | 4.01e-13 | 6 |
anterior segment of eyeball | 2.26e-12 | 14 |
camera-type eye | 7.66e-09 | 20 |
simple eye | 7.66e-09 | 20 |
immature eye | 7.66e-09 | 20 |
ocular region | 7.66e-09 | 20 |
eyeball of camera-type eye | 7.66e-09 | 20 |
optic cup | 7.66e-09 | 20 |
optic vesicle | 7.66e-09 | 20 |
eye primordium | 7.66e-09 | 20 |
eye | 1.90e-08 | 21 |
visual system | 1.90e-08 | 21 |
face | 4.34e-08 | 22 |
vasculature of organ | 1.42e-07 | 11 |
sense organ | 1.84e-07 | 24 |
sensory system | 1.84e-07 | 24 |
entire sense organ system | 1.84e-07 | 24 |
adrenal gland | 2.32e-07 | 3 |
adrenal cortex | 2.32e-07 | 3 |
adrenal/interrenal gland | 2.32e-07 | 3 |