FFCP PHASE1:Hg19::chr3:196229754..196229771,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:196229754..196229771,+ | |||
|coexpression_cluster_id=C427 | |||
|description=CAGE_peak_at_chr3:196229754..196229771,+ | |description=CAGE_peak_at_chr3:196229754..196229771,+ | ||
|id=chr3:196229754..196229771,+ | |id=chr3:196229754..196229771,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.09e-37!140;CL:0000037!1.10e-31!172;CL:0000566!1.10e-31!172;CL:0000766!1.39e-31!76;CL:0002057!2.27e-30!42;CL:0000860!3.67e-30!45;CL:0002031!8.68e-29!124;CL:0002032!9.29e-29!165;CL:0000837!9.29e-29!165;CL:0000988!2.98e-27!182;CL:0000557!4.13e-26!71;CL:0002087!6.37e-26!119;CL:0000839!8.92e-26!70;CL:0000763!2.69e-25!112;CL:0000049!2.69e-25!112;CL:0002009!3.02e-24!65;CL:0002194!7.96e-23!63;CL:0000576!7.96e-23!63;CL:0000040!7.96e-23!63;CL:0000559!7.96e-23!63;CL:0000134!6.02e-16!358;CL:0002320!1.96e-15!365;CL:0000048!2.43e-13!430;CL:0000219!4.12e-13!390;CL:0000723!2.49e-12!436;CL:0000034!6.90e-12!444;CL:0000003!1.74e-09!722;CL:0000063!2.73e-08!578;CL:0000094!5.58e-08!8;CL:0000084!2.43e-07!25;CL:0000827!2.43e-07!25;CL:0000791!3.30e-07!18;CL:0000789!3.30e-07!18;CL:0002420!3.30e-07!18;CL:0002419!3.30e-07!18;CL:0000790!3.30e-07!18;CL:0002371!5.66e-07!591;CL:0000012!6.45e-07!682 | |ontology_enrichment_celltype=CL:0000738!2.09e-37!140;CL:0000037!1.10e-31!172;CL:0000566!1.10e-31!172;CL:0000766!1.39e-31!76;CL:0002057!2.27e-30!42;CL:0000860!3.67e-30!45;CL:0002031!8.68e-29!124;CL:0002032!9.29e-29!165;CL:0000837!9.29e-29!165;CL:0000988!2.98e-27!182;CL:0000557!4.13e-26!71;CL:0002087!6.37e-26!119;CL:0000839!8.92e-26!70;CL:0000763!2.69e-25!112;CL:0000049!2.69e-25!112;CL:0002009!3.02e-24!65;CL:0002194!7.96e-23!63;CL:0000576!7.96e-23!63;CL:0000040!7.96e-23!63;CL:0000559!7.96e-23!63;CL:0000134!6.02e-16!358;CL:0002320!1.96e-15!365;CL:0000048!2.43e-13!430;CL:0000219!4.12e-13!390;CL:0000723!2.49e-12!436;CL:0000034!6.90e-12!444;CL:0000003!1.74e-09!722;CL:0000063!2.73e-08!578;CL:0000094!5.58e-08!8;CL:0000084!2.43e-07!25;CL:0000827!2.43e-07!25;CL:0000791!3.30e-07!18;CL:0000789!3.30e-07!18;CL:0002420!3.30e-07!18;CL:0002419!3.30e-07!18;CL:0000790!3.30e-07!18;CL:0002371!5.66e-07!591;CL:0000012!6.45e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.22e-60;33!CL:0002057;6.22e-60;33!CL:0000473;8.97e-44;39!CL:0000234;8.97e-44;39!CL:0000576;1.21e-38;48!CL:0000766;5.45e-31;69!CL:0000094;7.02e-19;8!CL:0002087;1.23e-14;104!CL:0000763;1.24e-13;100!CL:0000081;2.99e-13;11!CL:0002393;4.78e-13;6!CL:0002397;4.78e-13;6!CL:0000738;1.73e-12;136!CL:0000624;1.73e-09;6!CL:0000988;6.98e-09;177!CL:0000623;3.49e-08;3!CL:0000775;4.77e-08;3!CL:0000767;6.37e-08;3!CL:0000226;2.19e-07;3!CL:0000842;2.19e-07;3!CL:0000791;4.58e-07;18!CL:0000789;4.58e-07;18!CL:0002419;4.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-71,42;CL:0002057,1.35e-71,42;CL:0000766,5.06e-65,72;CL:0000473,2.26e-64,48;CL:0000234,2.26e-64,48;CL:0000738,6.81e-63,136;CL:0002009,9.05e-53,61;CL:0000557,5.25e-52,67;CL:0002194,4.93e-49,59;CL:0000576,4.93e-49,59;CL:0000040,4.93e-49,59;CL:0000559,4.93e-49,59;CL:0000839,1.88e-47,66;CL:0000037,1.91e-47,168;CL:0002087,7.96e-45,115;CL:0000988,4.19e-44,177;CL:0002031,4.48e-44,120;CL:0000763,1.22e-42,108;CL:0000049,1.22e-42,108;CL:0002032,8.36e-42,161;CL:0000837,8.36e-42,161;CL:0000094,5.46e-19,8;CL:0000134,3.92e-18,354;CL:0002320,2.05e-17,361;CL:0000219,6.84e-15,386;CL:0000048,1.01e-13,427;CL:0000034,2.37e-13,441;CL:0000081,2.51e-13,11;CL:0000723,2.90e-13,433;CL:0000624,1.34e-09,6;CL:0002393,2.35e-08,9;CL:0002397,2.35e-08,9;CL:0000623,3.59e-08,3;CL:0000825,3.59e-08,3;CL:0000775,3.94e-08,3;CL:0000767,6.11e-08,3;CL:0000226,1.45e-07,3;CL:0000842,1.45e-07,3;CL:0000791,4.05e-07,18;CL:0000789,4.05e-07,18;CL:0002420,4.05e-07,18;CL:0002419,4.05e-07,18;CL:0000790,4.05e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-51;42!CL:0000049;4.33e-12;108!CL:0000790;4.58e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!9.79e-26!86;UBERON:0002371!3.83e-25!80;UBERON:0002390!9.95e-24!102;UBERON:0003061!9.95e-24!102;UBERON:0002193!6.29e-21!112;UBERON:0004765!1.85e-19!101;UBERON:0001434!1.85e-19!101;UBERON:0002405!1.31e-16!115;UBERON:0002384!1.35e-15!375;UBERON:0002204!4.62e-11!167;UBERON:0003081!3.11e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.01e-46,76;UBERON:0002390,5.00e-45,98;UBERON:0003061,5.00e-45,98;UBERON:0001474,2.24e-42,82;UBERON:0002193,1.54e-39,108;UBERON:0002405,9.91e-38,93;UBERON:0004765,1.77e-37,90;UBERON:0001434,1.84e-32,100;UBERON:0003081,5.71e-19,203;UBERON:0002384,5.54e-18,371;UBERON:0002204,3.09e-17,167;UBERON:0000926,6.75e-09,315;UBERON:0004120,6.75e-09,315;UBERON:0006603,6.75e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0.408001382488506,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0.164201178899891,0,7.08055698328027,4.22212337906934,2.94150634300544,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0.587200878669695,5.53995408531877,7.2196001089251,4.99125002646459,0,0,0,2.61716829803216,5.29026321164333,2.66842467306598,4.41615170120801,4.11167888021826,4.33588919253145,2.58923153089935,2.81776777182011,4.49316236788312,3.7922024881028,5.16387746867061,2.70852973188684,3.76484679085209,4.63940455098338,3.37085226667627,3.36692281607993,2.56743221660875,1.91801137739712,1.64925650093358,3.98927315243264,2.98357325372886,2.32167390902867,1.13477044938228,1.24564449799115,4.01997864410789,8.34372669472322,4.34377689410233,1.21079900526674,1.10483290796269,1.58231193720442,1.05627643155971,1.27562579979026,1.25795187305026,2.02191536063691,3.45406853535464,1.92870704036496,0.570025487482497,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,2.24203425192614,0.263384084775077,5.11445402295966,8.25322601773246,4.31763147898969,0,0.651844533267181,0.946895611469467,0,1.78256731016278,1.47302953737419,0.221533894583621,1.35401931882508,0.768547918354051,1.04047478047903,0.164437904603676,2.76350017785848,1.44901542867526,0.296573126324121,0.802622484269139,0,0.566546713487831,1.53288197440768,0.68725489096526,3.54227568827304,0,0,0.950452044448374,0.451725357233318,0.255973222308837,0,0.473554504088034,0.821127996921047,5.64498881029251,7.75576567772171,3.18613688542158,2.43806866313962,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0.476981248610684,1.14398982156026,1.11437250398869,0.39752481473341,0.860234595106124,0,0,0,0.275118041940067,0.417989933073621,0,0.35576626268671,0,0,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0,0,11.8602375692457,7.75560528296651,0,0,0,0.529636723252875,0.286836620748814,0.709336764396714,0,0,0,0,0,0.490385709340376,0,0.576175924479999,0,0,0,0,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0.453728732640084,1.4351170855109,0,0.211931901159562,0.900273288253207,0.309157587715317,0,0,0.506328996723799,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0.196221465125346,1.15424147083917,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0.462985512576611,0,0,0,0,0,0.445893486866185,0,0,0,0.0895585227028483,0,0,1.47798971368783,0.352193736052904,0.829312462163088,0.864719720501769,1.51490920111656,0,0,0,0,0,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0.336255431980582,5.12279976525011,8.84073056924021,3.46526197955321,0,0,0,0,0,6.74106321552464,2.99161459204025,7.45947924184864,0,0.500170521059677,0.271265023699736,0.415941723061614,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,4.13536052245775,3.8828556147351,1.921096040462,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.355123450626254,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0,0.170453254832202,0,0,0,0.638063562472921,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,1.05650146756755,0.272999822815972,0,0,1.10273068709225,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.143411352204052,0,0,0.354761064070598,0.211107635297664,0,0,0.699869440489966,0.192444225451024,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0.238231775457789,1.23408681925858,0.648473311192717,2.16012574895246,0,0.106824071127473,0,0,0,0.144269212976445,0.284567373393656,0.478278818186467,0.199579371432817,0.957526850661834,0.635020748171649,0,0.561594356226918,0,0.156679895773023,0,0,0,0.403599414382095,0,0.687010689511529,0.614481528616916,0,0.333698283423817,0,0.835218521685727,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0.556543525114529,0.329607748453519,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,0,0,0,0,2.22273980289274,0,0,0,0,0.0874599999961957,0,0,0.762760950878299,0.472775363535873,0,0,0.173624994933292,0,0,1.52581736317083,0,0,0,0.10893846351899,0.41827123283581,0,0.797594390929008,0,0.0897576444097721,0,0.638002319463839,0.366390373607449,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.24278037953409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| ||
|short_description=p@chr3:196229754..196229771,+ | |short_description=p@chr3:196229754..196229771,+ | ||
}} | }} |
Latest revision as of 19:50, 29 July 2015
Short description: | p@chr3:196229754..196229771, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:196229754..196229771, + |
Coexpression cluster: | C427_Eosinophils_CD4_Peripheral_Neutrophils_Basophils_mature_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.01e-46 | 76 |
hematopoietic system | 5.00e-45 | 98 |
blood island | 5.00e-45 | 98 |
bone element | 2.24e-42 | 82 |
hemolymphoid system | 1.54e-39 | 108 |
immune system | 9.91e-38 | 93 |
skeletal element | 1.77e-37 | 90 |
skeletal system | 1.84e-32 | 100 |
lateral plate mesoderm | 5.71e-19 | 203 |
connective tissue | 5.54e-18 | 371 |
musculoskeletal system | 3.09e-17 | 167 |
mesoderm | 6.75e-09 | 315 |
mesoderm-derived structure | 6.75e-09 | 315 |
presumptive mesoderm | 6.75e-09 | 315 |