FFCP PHASE1:Hg19::chr3:46412829..46412861,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:46412829..46412861,- to FFCP PHASE1:Hg19::chr3:46412829..46412861,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:46412829..46412861,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_at_chr3:46412829..46412861,- | |||
|id=chr3:46412829..46412861,- | |||
|ontology_enrichment_celltype=CL:0002009!1.78e-47!65;CL:0002194!6.45e-46!63;CL:0000576!6.45e-46!63;CL:0000040!6.45e-46!63;CL:0000559!6.45e-46!63;CL:0000557!1.65e-41!71;CL:0002057!4.77e-41!42;CL:0000766!3.47e-40!76;CL:0000839!4.31e-39!70;CL:0000860!4.00e-37!45;CL:0000738!3.95e-36!140;CL:0002087!4.39e-36!119;CL:0002031!2.02e-32!124;CL:0000037!6.08e-29!172;CL:0000566!6.08e-29!172;CL:0000763!1.06e-27!112;CL:0000049!1.06e-27!112;CL:0000988!1.21e-25!182;CL:0002032!1.53e-25!165;CL:0000837!1.53e-25!165;CL:0000451!3.62e-07!10;CL:0000840!4.46e-07!5;CL:0001029!4.46e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.82e-50;39!CL:0000234;3.82e-50;39!CL:0000860;4.91e-50;33!CL:0002057;4.91e-50;33!CL:0000576;1.23e-37;48!CL:0000766;3.40e-25;69!CL:0000763;1.23e-12;100!CL:0000235;1.15e-11;6!CL:0000840;7.09e-10;5!CL:0002087;9.62e-10;104!CL:0000738;1.37e-09;136!CL:0002393;3.91e-09;6!CL:0002397;3.91e-09;6!CL:0000451;6.13e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.04e-73,61;CL:0002194,2.46e-71,59;CL:0000576,2.46e-71,59;CL:0000040,2.46e-71,59;CL:0000559,2.46e-71,59;CL:0000473,7.59e-68,48;CL:0000234,7.59e-68,48;CL:0000557,1.52e-65,67;CL:0000766,4.34e-62,72;CL:0000839,5.69e-62,66;CL:0000860,2.41e-57,42;CL:0002057,2.41e-57,42;CL:0000763,5.15e-42,108;CL:0000049,5.15e-42,108;CL:0000738,3.14e-38,136;CL:0002087,1.34e-37,115;CL:0002031,4.86e-34,120;CL:0000037,9.81e-31,168;CL:0000988,4.00e-28,177;CL:0002032,4.04e-26,161;CL:0000837,4.04e-26,161;CL:0000235,1.14e-11,6;CL:0000840,6.11e-10,5;CL:0001029,6.11e-10,5;CL:0000451,5.35e-09,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.74e-41;42!CL:0000049;1.05e-11;108!UBERON:0006601;9.37e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.85e-45!102;UBERON:0003061!4.85e-45!102;UBERON:0002193!4.26e-41!112;UBERON:0007023!2.74e-40!115;UBERON:0002371!4.09e-37!80;UBERON:0001474!6.48e-33!86;UBERON:0002405!3.27e-26!115;UBERON:0004765!9.62e-26!101;UBERON:0001434!9.62e-26!101;UBERON:0001049!2.45e-24!57;UBERON:0005068!2.45e-24!57;UBERON:0006241!2.45e-24!57;UBERON:0007135!2.45e-24!57;UBERON:0002780!4.89e-20!41;UBERON:0001890!4.89e-20!41;UBERON:0006240!4.89e-20!41;UBERON:0003080!2.74e-19!42;UBERON:0002616!8.48e-19!59;UBERON:0002020!2.25e-16!34;UBERON:0003528!2.25e-16!34;UBERON:0001893!2.73e-16!34;UBERON:0001017!4.08e-16!82;UBERON:0002791!1.06e-15!33;UBERON:0000955!1.13e-15!69;UBERON:0006238!1.13e-15!69;UBERON:0005743!1.79e-15!86;UBERON:0001869!1.19e-14!32;UBERON:0003075!4.29e-14!86;UBERON:0007284!4.29e-14!86;UBERON:0000073!2.24e-13!94;UBERON:0001016!2.24e-13!94;UBERON:0002346!8.13e-13!90;UBERON:0003081!3.54e-12!216;UBERON:0002619!7.87e-12!22;UBERON:0003056!1.00e-10!61;UBERON:0001950!3.32e-10!20;UBERON:0000956!9.08e-10!25;UBERON:0000203!9.08e-10!25;UBERON:0002204!1.51e-09!167;UBERON:0002420!4.78e-09!9;UBERON:0007245!4.78e-09!9;UBERON:0010009!4.78e-09!9;UBERON:0010011!4.78e-09!9;UBERON:0000454!4.78e-09!9;UBERON:0002308!7.54e-09!9;UBERON:0000125!7.54e-09!9;UBERON:0009663!2.71e-07!7;UBERON:0000178!2.76e-07!15;UBERON:0000179!2.76e-07!15;UBERON:0000463!2.76e-07!15;UBERON:0000153!2.95e-07!129;UBERON:0007811!2.95e-07!129;UBERON:0000062!3.80e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.60e-21;41!UBERON:0001890;5.60e-21;41!UBERON:0003528;3.24e-20;34!UBERON:0002020;3.24e-20;34!UBERON:0002791;1.47e-19;32!UBERON:0001893;5.50e-19;34!UBERON:0001869;6.46e-18;32!UBERON:0000073;2.64e-17;53!UBERON:0002616;2.64e-17;53!UBERON:0002619;1.67e-16;22!UBERON:0001950;4.78e-14;20!UBERON:0000956;4.90e-14;25!UBERON:0000203;4.90e-14;25!UBERON:0002420;1.09e-12;9!UBERON:0007245;1.09e-12;9!UBERON:0010009;1.09e-12;9!UBERON:0010011;1.09e-12;9!UBERON:0000454;1.09e-12;9!UBERON:0000125;1.78e-12;9!UBERON:0002308;1.78e-12;9!UBERON:0009663;4.49e-10;7!UBERON:0001017;1.00e-09;75!UBERON:0000955;1.67e-09;68!UBERON:0002298;6.30e-09;6!UBERON:0000349;5.27e-08;5!UBERON:0001016;6.68e-08;83!UBERON:0000178;7.14e-08;15!UBERON:0000179;7.14e-08;15!UBERON:0000463;7.14e-08;15!UBERON:0001894;1.46e-07;7!UBERON:0007023;2.88e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.50e-60,98;UBERON:0003061,1.50e-60,98;UBERON:0002371,8.17e-60,76;UBERON:0002193,7.03e-55,108;UBERON:0001474,4.10e-54,82;UBERON:0004765,1.07e-47,90;UBERON:0002405,2.14e-47,93;UBERON:0001434,3.97e-41,100;UBERON:0001049,1.99e-33,56;UBERON:0005068,1.99e-33,56;UBERON:0006241,1.99e-33,56;UBERON:0007135,1.99e-33,56;UBERON:0000073,1.06e-29,53;UBERON:0002616,1.06e-29,53;UBERON:0002780,7.64e-28,41;UBERON:0001890,7.64e-28,41;UBERON:0003080,7.64e-28,41;UBERON:0006240,7.64e-28,41;UBERON:0003528,7.03e-24,34;UBERON:0002020,7.03e-24,34;UBERON:0007023,2.53e-23,114;UBERON:0001893,5.58e-22,34;UBERON:0000955,9.60e-22,68;UBERON:0006238,9.60e-22,68;UBERON:0002791,1.21e-21,32;UBERON:0001017,2.09e-20,81;UBERON:0003075,2.49e-20,82;UBERON:0007284,2.49e-20,82;UBERON:0003081,7.68e-20,203;UBERON:0001869,1.51e-19,32;UBERON:0002346,7.59e-19,86;UBERON:0001016,2.58e-18,89;UBERON:0002204,1.02e-17,167;UBERON:0003056,4.47e-17,61;UBERON:0002619,2.64e-16,22;UBERON:0001950,7.13e-14,20;UBERON:0000956,7.27e-14,25;UBERON:0000203,7.27e-14,25;UBERON:0010371,1.20e-13,104;UBERON:0002420,6.40e-13,9;UBERON:0007245,6.40e-13,9;UBERON:0010009,6.40e-13,9;UBERON:0010011,6.40e-13,9;UBERON:0000454,6.40e-13,9;UBERON:0000125,1.28e-12,9;UBERON:0002308,1.28e-12,9;UBERON:0000923,6.58e-12,560;UBERON:0010316,6.58e-12,560;UBERON:0005291,6.58e-12,560;UBERON:0006598,6.58e-12,560;UBERON:0010317,6.58e-12,560;UBERON:0002532,6.58e-12,560;UBERON:0002050,1.28e-11,564;UBERON:0005423,1.91e-10,581;UBERON:0009663,2.88e-10,7;UBERON:0000922,1.00e-09,592;UBERON:0002298,7.10e-09,6;UBERON:0010314,1.45e-08,132;UBERON:0000349,5.64e-08,5;UBERON:0000178,9.60e-08,15;UBERON:0000179,9.60e-08,15;UBERON:0000463,9.60e-08,15;UBERON:0001894,2.16e-07,7;UBERON:0006222,2.16e-07,7;UBERON:0003076,5.00e-07,15;UBERON:0003057,5.00e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.57345710739562,0.383829398097213,1.85779347979291,0,0,0,0,0,1.17440175733939,5.53995408531877,1.60435557976113,1.30206522429511,14.1066748771152,7.12566065241755,19.8333187078324,17.8839833698865,23.4283085087062,17.9512205278984,19.0591810262661,16.0355476328512,20.1309141081817,17.261543539329,19.9805351092698,28.8508320464074,12.0660988257816,12.2642089880927,13.5426486594342,14.8711448238658,24.834459655264,31.6860113067569,16.2224462956578,24.7115350848592,18.5407766481722,11.2149442063483,18.7495838164334,20.0325632750366,20.3146467040009,19.2910976394988,20.553134216854,12.5624332628372,11.4726242052444,32.1439490163573,12.7133895553007,33.881542510856,44.9376590166056,8.23895616616573,3.18906449947565,3.77385561915077,6.40273197535022,3.75442232103766,2.89306056054744,0.570025487482497,0.19891667719909,0,0,0.546138611262131,0.889509253863555,0,0,0,0,1.90810750907073,0,0.587237189370939,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0.390178042679635,0.328875809207352,0.276350017785848,0,0,0,0,0.793165398882963,0,0,0.506039384039006,0.637130828648193,0.651083453856419,0.950452044448374,0.903450714466637,0.639933055772092,1.24930726552346,2.13099526839615,0,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,13.6309905334967,17.7612332045253,14.758333617594,16.4558530770686,13.7278778587231,16.7155875598304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0082107913617,30.6545587332401,18.8761576106685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.54099393465,7.5338563714819,23.1917333431335,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,2.85878130549347,4.93634727703433,2.59389324477087,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,30.0663431107816,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,3.97659059106519,3.65740482667333,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,11.2545921449912,0,2.3948309234694,0,0.969332746095218,2.59750674853184,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.65312164975897,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,3.63966118095656,0.802577647298789,4.2167600230561,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,1.07628353124994,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,6.98217432349165,0,0,0,0.279282401272254,0,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,6.36183751847443,3.40508515278939,0,0,0,1.349843349309,1.5476039091159,1.45798935979259,0,0.551639951094387,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,1.16354660725395,5.15707146796491,0,0,2.0289608387862,1.41483874589699,1.65695622138878,1.9846640872478,0,0,0,0,0,0.306345576763462,0,0,3.54427271986794,1.09823638411767,1.8778639605975,2.29363678276028,6.10109783452688,1.61450647647597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0.194860308839388,0,0,0,0,0,0.19998739585493,0,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15612605173627,1.41696576325585,2.87340946302872,1.23069818544453,0,0.622415272177961,0.968853873791107,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.945526184657525,2.34323429584154,2.27355476151302,1.14148458349032,0,0,0,0,0,1.07140367175657,2.35398605553177,0,1.13831095675649,0.709618961301111,0.460935950223117,0,2.03909198930495,1.05236437700559,0,0,0.39246546425257,1.72827148907602,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.874238242015829,0,0,0,5.88925401344836,13.664134415046,2.5359343655004,0,0.469919589899268,0.644578879735772,0,0,0,0,0,1.37618785021362,6.73696040811821,0,1.01987235286372,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,3.31667775783512,5.58538177654234,0,0.476128862927481,0.193766729508018,0.806971285846153,0,0.12729431655633,0,0.2177167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| ||
|short_description=p@chr3:46412829..46412861,- | |||
}} | }} |
Latest revision as of 21:23, 29 July 2015
Short description: | p@chr3:46412829..46412861, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:46412829..46412861, - |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.04e-73 | 61 |
monopoietic cell | 2.46e-71 | 59 |
monocyte | 2.46e-71 | 59 |
monoblast | 2.46e-71 | 59 |
promonocyte | 2.46e-71 | 59 |
defensive cell | 7.59e-68 | 48 |
phagocyte | 7.59e-68 | 48 |
granulocyte monocyte progenitor cell | 1.52e-65 | 67 |
myeloid leukocyte | 4.34e-62 | 72 |
myeloid lineage restricted progenitor cell | 5.69e-62 | 66 |
classical monocyte | 2.41e-57 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.41e-57 | 42 |
myeloid cell | 5.15e-42 | 108 |
common myeloid progenitor | 5.15e-42 | 108 |
leukocyte | 3.14e-38 | 136 |
nongranular leukocyte | 1.34e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 4.86e-34 | 120 |
hematopoietic stem cell | 9.81e-31 | 168 |
hematopoietic cell | 4.00e-28 | 177 |
hematopoietic oligopotent progenitor cell | 4.04e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.04e-26 | 161 |
macrophage | 1.14e-11 | 6 |
immature conventional dendritic cell | 6.11e-10 | 5 |
common dendritic progenitor | 6.11e-10 | 5 |
dendritic cell | 5.35e-09 | 10 |