FFCP PHASE1:Hg19::chr5:150158845..150158876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:150158845..150158876,+ | |||
|description=CAGE_peak_at_chr5:150158845..150158876,+ | |description=CAGE_peak_at_chr5:150158845..150158876,+ | ||
|id=chr5:150158845..150158876,+ | |id=chr5:150158845..150158876,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.45e-26!42;CL:0000860!6.87e-24!45;CL:0000766!1.17e-21!76;CL:0000839!9.27e-21!70;CL:0000557!2.33e-20!71;CL:0002194!1.55e-16!63;CL:0000576!1.55e-16!63;CL:0000040!1.55e-16!63;CL:0000559!1.55e-16!63;CL:0002009!7.86e-16!65;CL:0000763!1.78e-15!112;CL:0000049!1.78e-15!112;CL:0000738!1.28e-12!140;CL:0000037!8.35e-12!172;CL:0000566!8.35e-12!172;CL:0000048!5.22e-11!430;CL:0000034!9.16e-11!444;CL:0000723!1.24e-10!436;CL:0000988!1.28e-10!182;CL:0002031!2.74e-10!124;CL:0000784!2.37e-09!3;CL:0002032!2.60e-09!165;CL:0000837!2.60e-09!165;CL:0000134!7.20e-09!358;CL:0002274!7.62e-09!5;CL:0000457!7.62e-09!5;CL:0002191!7.62e-09!5;CL:0000097!7.62e-09!5;CL:0000831!7.62e-09!5;CL:0002028!7.62e-09!5;CL:0002320!1.93e-08!365;CL:0002087!3.74e-08!119;CL:0000219!6.00e-07!390 | |ontology_enrichment_celltype=CL:0002057!4.45e-26!42;CL:0000860!6.87e-24!45;CL:0000766!1.17e-21!76;CL:0000839!9.27e-21!70;CL:0000557!2.33e-20!71;CL:0002194!1.55e-16!63;CL:0000576!1.55e-16!63;CL:0000040!1.55e-16!63;CL:0000559!1.55e-16!63;CL:0002009!7.86e-16!65;CL:0000763!1.78e-15!112;CL:0000049!1.78e-15!112;CL:0000738!1.28e-12!140;CL:0000037!8.35e-12!172;CL:0000566!8.35e-12!172;CL:0000048!5.22e-11!430;CL:0000034!9.16e-11!444;CL:0000723!1.24e-10!436;CL:0000988!1.28e-10!182;CL:0002031!2.74e-10!124;CL:0000784!2.37e-09!3;CL:0002032!2.60e-09!165;CL:0000837!2.60e-09!165;CL:0000134!7.20e-09!358;CL:0002274!7.62e-09!5;CL:0000457!7.62e-09!5;CL:0002191!7.62e-09!5;CL:0000097!7.62e-09!5;CL:0000831!7.62e-09!5;CL:0002028!7.62e-09!5;CL:0002320!1.93e-08!365;CL:0002087!3.74e-08!119;CL:0000219!6.00e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000784;1.54e-36;3!CL:0002591;6.05e-13;1!CL:0000860;1.94e-12;33!CL:0002057;1.94e-12;33!CL:0000097;1.33e-10;5!CL:0000451;1.98e-10;10!CL:0000473;3.00e-09;39!CL:0000234;3.00e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.14e-36,3;CL:0000839,3.82e-13,66;CL:0000557,6.18e-13,67;CL:0002591,7.68e-13,1;CL:0000766,5.62e-12,72;CL:0000097,1.47e-10,5;CL:0002028,1.47e-10,5;CL:0000451,1.83e-10,10;CL:0000860,1.19e-09,42;CL:0002057,1.19e-09,42;CL:0000763,1.69e-09,108;CL:0000049,1.69e-09,108;CL:0000738,5.64e-09,136;CL:0002194,6.00e-09,59;CL:0000576,6.00e-09,59;CL:0000040,6.00e-09,59;CL:0000559,6.00e-09,59;CL:0002009,1.22e-08,61;CL:0000037,1.97e-08,168;CL:0000473,2.12e-08,48;CL:0000234,2.12e-08,48;CL:0000988,6.41e-08,177;CL:0002031,8.73e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;6.35e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.44e-20!80;UBERON:0001474!3.28e-18!86;UBERON:0002390!1.44e-17!102;UBERON:0003061!1.44e-17!102;UBERON:0002193!1.76e-16!112;UBERON:0002204!6.47e-16!167;UBERON:0002405!9.58e-15!115;UBERON:0004765!2.60e-14!101;UBERON:0001434!2.60e-14!101;UBERON:0002384!7.38e-08!375;UBERON:0003081!2.42e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!3.44e-20!80;UBERON:0001474!3.28e-18!86;UBERON:0002390!1.44e-17!102;UBERON:0003061!1.44e-17!102;UBERON:0002193!1.76e-16!112;UBERON:0002204!6.47e-16!167;UBERON:0002405!9.58e-15!115;UBERON:0004765!2.60e-14!101;UBERON:0001434!2.60e-14!101;UBERON:0002384!7.38e-08!375;UBERON:0003081!2.42e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;4.17e-07;2!UBERON:0002012;4.17e-07;2!UBERON:0008886;4.17e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.68e-11,76;UBERON:0001474,2.11e-10,82;UBERON:0004765,2.16e-09,90;UBERON:0002405,4.67e-09,93;UBERON:0002390,1.52e-08,98;UBERON:0003061,1.52e-08,98;UBERON:0001434,2.37e-08,100;UBERON:0002193,1.17e-07,108;UBERON:0000078,4.69e-07,2;UBERON:0007497,4.69e-07,2;UBERON:0003643,4.69e-07,2;UBERON:0003504,4.69e-07,2;UBERON:0003469,4.69e-07,2;UBERON:0003496,4.69e-07,2;UBERON:0002012,4.69e-07,2;UBERON:0008886,4.69e-07,2;UBERON:0007303,4.69e-07,2;UBERON:0002061,4.69e-07,2;UBERON:0005432,4.69e-07,2;UBERON:0004363,4.69e-07,2;UBERON:0002204,5.86e-07,167 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,1.0246428261164,1.6553756092201,2.75796544589295,0.645484683583826,1.35426486594342,0,0,0.449446968890169,1.22433556948361,0,1.27867425159808,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8618874916641,4.57595928624102,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,4.49047013467453,0.414656231081544,2.73827911492227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2847046008296,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0.232429036905685,0.411167888021826,0.619412741790207,0.28769239232215,1.0246428261164,1.6553756092201,2.75796544589295,0.645484683583826,1.35426486594342,0,0,0.449446968890169,1.22433556948361,0,1.27867425159808,0,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8618874916641,4.57595928624102,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,4.49047013467453,0.414656231081544,2.73827911492227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,1.10273068709225,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2847046008296,0.605399121573143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|short_description=p@chr5:150158845..150158876,+ | |short_description=p@chr5:150158845..150158876,+ | ||
}} | }} |
Latest revision as of 11:44, 30 July 2015
Short description: | p@chr5:150158845..150158876, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150158845..150158876, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.14e-36 | 3 |
myeloid lineage restricted progenitor cell | 3.82e-13 | 66 |
granulocyte monocyte progenitor cell | 6.18e-13 | 67 |
smooth muscle cell of the pulmonary artery | 7.68e-13 | 1 |
myeloid leukocyte | 5.62e-12 | 72 |
mast cell | 1.47e-10 | 5 |
basophil mast progenitor cell | 1.47e-10 | 5 |
dendritic cell | 1.83e-10 | 10 |
classical monocyte | 1.19e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-09 | 42 |
myeloid cell | 1.69e-09 | 108 |
common myeloid progenitor | 1.69e-09 | 108 |
leukocyte | 5.64e-09 | 136 |
monopoietic cell | 6.00e-09 | 59 |
monocyte | 6.00e-09 | 59 |
monoblast | 6.00e-09 | 59 |
promonocyte | 6.00e-09 | 59 |
macrophage dendritic cell progenitor | 1.22e-08 | 61 |
hematopoietic stem cell | 1.97e-08 | 168 |
defensive cell | 2.12e-08 | 48 |
phagocyte | 2.12e-08 | 48 |
hematopoietic cell | 6.41e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 8.73e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.68e-11 | 76 |
bone element | 2.11e-10 | 82 |
skeletal element | 2.16e-09 | 90 |
immune system | 4.67e-09 | 93 |
hematopoietic system | 1.52e-08 | 98 |
blood island | 1.52e-08 | 98 |
skeletal system | 2.37e-08 | 100 |
hemolymphoid system | 1.17e-07 | 108 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.69e-07 | 2 |
developing epithelial placode | 4.69e-07 | 2 |
respiratory system arterial blood vessel | 4.69e-07 | 2 |
respiratory system blood vessel | 4.69e-07 | 2 |
respiratory system artery | 4.69e-07 | 2 |
head blood vessel | 4.69e-07 | 2 |
pulmonary artery | 4.69e-07 | 2 |
pulmonary vascular system | 4.69e-07 | 2 |
pharyngeal vasculature | 4.69e-07 | 2 |
truncus arteriosus | 4.69e-07 | 2 |
aortic sac | 4.69e-07 | 2 |
pharyngeal arch artery | 4.69e-07 | 2 |
musculoskeletal system | 5.86e-07 | 167 |