FFCP PHASE1:Hg19::chr5:167247119..167247129,+: Difference between revisions
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|id=chr5:167247119..167247129,+
|short_description=p@chr5:167247119..167247129,+
|description=CAGE_peak_at_chr5:167247119..167247129,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:167247119..167247129,+ | |||
|coexpression_cluster_id=C592 | |||
|description=CAGE_peak_at_chr5:167247119..167247129,+ | |||
|id=chr5:167247119..167247129,+ | |||
|ontology_enrichment_celltype=CL:0002368!6.01e-36!13;CL:0002159!4.86e-29!13;CL:0002076!2.76e-28!43;CL:0000223!9.17e-20!59;CL:0002621!2.12e-19!3;CL:0002166!3.06e-19!3;CL:0000068!6.34e-19!3;CL:0000069!6.34e-19!3;CL:0000307!6.34e-19!3;CL:0000377!6.34e-19!3;CL:0002202!1.36e-16!9;CL:0002632!1.36e-16!9;CL:0002077!1.85e-13!33;CL:0000317!3.06e-13!2;CL:1000448!3.06e-13!2;CL:0002308!3.06e-13!2;CL:0002140!3.06e-13!2;CL:0000362!1.45e-12!8;CL:0000066!6.99e-12!254;CL:0000220!4.35e-10!246;CL:0002321!5.76e-10!248;CL:0000240!1.08e-09!6;CL:0000311!1.08e-09!6;CL:0000079!1.08e-09!6;CL:0000237!1.08e-09!6;CL:0000036!1.08e-09!6;CL:0000357!1.08e-09!6;CL:0000114!1.08e-09!6;CL:0002328!7.42e-09!3;CL:0002336!4.34e-07!1;CL:0002261!4.34e-07!1;CL:0002170!4.34e-07!1;CL:0002251!4.58e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002621;1.65e-54;3!CL:0002159;3.10e-32;14!CL:0002166;4.87e-25;3!CL:0000362;1.07e-18;9!CL:0000312;2.02e-15;5!CL:0002076;4.36e-15;42!CL:0002368;4.28e-13;13!CL:0000240;5.10e-13;6!CL:0000311;5.10e-13;6!CL:0000079;5.10e-13;6!CL:0000237;5.10e-13;6!CL:0002077;1.17e-11;34!CL:0000317;2.17e-10;2!CL:1000448;2.17e-10;2!CL:0002308;2.17e-10;2!CL:0002140;2.17e-10;2!CL:0002251;8.87e-09;20!CL:0000307;2.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.81e-54,3;CL:0002159,3.00e-32,14;CL:0002166,4.31e-25,3;CL:0000362,1.10e-18,9;CL:0000312,2.02e-15,5;CL:0002076,2.55e-15,42;CL:0002077,2.16e-13,34;CL:0002368,4.28e-13,13;CL:0000240,5.11e-13,6;CL:0000311,5.11e-13,6;CL:0000079,5.11e-13,6;CL:0000237,5.11e-13,6;CL:0000036,5.11e-13,6;CL:0000357,5.11e-13,6;CL:0000114,5.11e-13,6;CL:0000223,4.62e-11,58;CL:0000317,2.27e-10,2;CL:1000448,2.27e-10,2;CL:0002308,2.27e-10,2;CL:0002140,2.27e-10,2;CL:0002251,8.99e-09,20;CL:0002321,5.72e-08,250;CL:0000066,6.20e-08,253;CL:0000068,2.79e-07,3;CL:0000069,2.79e-07,3;CL:0000307,2.79e-07,3;CL:0000377,2.79e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.10e-13;6!CL:0000114;5.10e-13;6!CL:0000377;2.40e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.12e-19!3;UBERON:0001004!1.59e-15!72;UBERON:0001708!1.44e-14!4;UBERON:0001704!1.44e-14!4;UBERON:0000065!1.01e-13!53;UBERON:0002419!3.06e-13!2;UBERON:0007771!3.06e-13!2;UBERON:0003297!3.06e-13!2;UBERON:0001821!3.06e-13!2;UBERON:0003487!3.06e-13!2;UBERON:0001820!3.06e-13!2;UBERON:0005089!3.06e-13!2;UBERON:0005088!3.06e-13!2;UBERON:0004807!2.09e-12!28;UBERON:0007196!1.37e-10!14;UBERON:0001558!1.37e-10!14;UBERON:0002090!7.16e-10!6;UBERON:0004815!7.42e-09!3;UBERON:0002031!7.42e-09!3;UBERON:0003126!2.16e-08!7;UBERON:0001005!2.16e-08!7;UBERON:0005178!8.87e-08!34;UBERON:0002224!8.87e-08!34;UBERON:0001828!1.45e-07!8;UBERON:0004119!1.49e-07!169;UBERON:0000925!1.49e-07!169;UBERON:0006595!1.49e-07!169;UBERON:0005181!1.57e-07!35;UBERON:0001003!3.27e-07!14;UBERON:0007376!3.27e-07!14;UBERON:0007383!3.27e-07!14;UBERON:0000072!5.04e-07!46;UBERON:0006834!6.20e-07!1;UBERON:0002336!6.97e-07!1;UBERON:0001018!6.97e-07!1;UBERON:0002473!6.97e-07!1;UBERON:0005340!6.97e-07!1;UBERON:0002316!6.97e-07!1;UBERON:0003544!6.97e-07!1;UBERON:0001020!6.97e-07!1;UBERON:0005970!6.97e-07!1;UBERON:0002437!6.97e-07!1;UBERON:0002185!7.64e-07!4;UBERON:0003102!8.61e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.65e-54;3!UBERON:0003929;7.44e-24;7!UBERON:0003350;5.71e-21;8!UBERON:0001828;5.71e-21;8!UBERON:0010371;6.75e-21;31!UBERON:0001708;4.70e-19;4!UBERON:0008895;4.70e-19;4!UBERON:0011159;1.88e-15;5!UBERON:0000486;3.22e-14;12!UBERON:0003729;3.55e-13;13!UBERON:0001003;1.73e-11;15!UBERON:0007376;1.73e-11;15!UBERON:0002419;2.17e-10;2!UBERON:0007771;2.17e-10;2!UBERON:0003297;2.17e-10;2!UBERON:0001821;2.17e-10;2!UBERON:0003487;2.17e-10;2!UBERON:0001820;2.17e-10;2!UBERON:0000161;3.28e-09;19!UBERON:0000166;3.28e-09;19!UBERON:0000344;8.87e-09;20!UBERON:0004807;4.95e-08;22!UBERON:0011137;1.56e-07;11!UBERON:0010323;1.56e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.81e-54,3;UBERON:0003350,5.91e-21,8;UBERON:0001828,5.91e-21,8;UBERON:0001708,4.29e-19,4;UBERON:0008895,4.29e-19,4;UBERON:0011159,1.75e-15,5;UBERON:0003729,3.63e-13,13;UBERON:0010188,4.52e-13,6;UBERON:0002539,4.52e-13,6;UBERON:0008816,4.52e-13,6;UBERON:0001003,1.76e-11,15;UBERON:0007376,1.76e-11,15;UBERON:0007383,1.76e-11,15;UBERON:0003102,3.17e-11,99;UBERON:0002419,2.27e-10,2;UBERON:0007771,2.27e-10,2;UBERON:0003297,2.27e-10,2;UBERON:0001821,2.27e-10,2;UBERON:0003487,2.27e-10,2;UBERON:0001820,2.27e-10,2;UBERON:0005089,2.27e-10,2;UBERON:0005088,2.27e-10,2;UBERON:0000344,8.99e-09,20;UBERON:0001004,1.24e-08,74;UBERON:0000033,3.67e-08,56;UBERON:0000166,5.01e-08,22;UBERON:0010323,1.51e-07,11;UBERON:0000153,2.26e-07,62;UBERON:0007811,2.26e-07,62 | |||
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|short_description=p@chr5:167247119..167247129,+ | |||
}} | }} |
Latest revision as of 12:43, 30 July 2015
Short description: | p@chr5:167247119..167247129, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167247119..167247129, + |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.81e-54 | 3 |
general ecto-epithelial cell | 3.00e-32 | 14 |
epithelial cell of Malassez | 4.31e-25 | 3 |
epidermal cell | 1.10e-18 | 9 |
keratinocyte | 2.02e-15 | 5 |
endo-epithelial cell | 2.55e-15 | 42 |
ecto-epithelial cell | 2.16e-13 | 34 |
respiratory epithelial cell | 4.28e-13 | 13 |
stratified squamous epithelial cell | 5.11e-13 | 6 |
keratin accumulating cell | 5.11e-13 | 6 |
stratified epithelial cell | 5.11e-13 | 6 |
keratinizing barrier epithelial cell | 5.11e-13 | 6 |
epithelial fate stem cell | 5.11e-13 | 6 |
stratified epithelial stem cell | 5.11e-13 | 6 |
surface ectodermal cell | 5.11e-13 | 6 |
endodermal cell | 4.62e-11 | 58 |
sebum secreting cell | 2.27e-10 | 2 |
epithelial cell of sweat gland | 2.27e-10 | 2 |
epithelial cell of skin gland | 2.27e-10 | 2 |
acinar cell of sebaceous gland | 2.27e-10 | 2 |
epithelial cell of alimentary canal | 8.99e-09 | 20 |
embryonic cell | 5.72e-08 | 250 |
epithelial cell | 6.20e-08 | 253 |
duct epithelial cell | 2.79e-07 | 3 |
branched duct epithelial cell | 2.79e-07 | 3 |
tracheal epithelial cell | 2.79e-07 | 3 |
tracheoblast | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.81e-54 | 3 |
epithelium of mucosa | 5.91e-21 | 8 |
gingiva | 5.91e-21 | 8 |
jaw skeleton | 4.29e-19 | 4 |
splanchnocranium | 4.29e-19 | 4 |
primary subdivision of cranial skeletal system | 1.75e-15 | 5 |
mouth mucosa | 3.63e-13 | 13 |
protuberance | 4.52e-13 | 6 |
pharyngeal arch | 4.52e-13 | 6 |
embryonic head | 4.52e-13 | 6 |
skin epidermis | 1.76e-11 | 15 |
outer epithelium | 1.76e-11 | 15 |
enveloping layer of ectoderm | 1.76e-11 | 15 |
surface structure | 3.17e-11 | 99 |
skin gland | 2.27e-10 | 2 |
epidermis gland | 2.27e-10 | 2 |
gland of integumental system | 2.27e-10 | 2 |
sebaceous gland | 2.27e-10 | 2 |
skin sebaceous gland | 2.27e-10 | 2 |
sweat gland | 2.27e-10 | 2 |
sweat gland placode | 2.27e-10 | 2 |
sebaceous gland placode | 2.27e-10 | 2 |
mucosa | 8.99e-09 | 20 |
respiratory system | 1.24e-08 | 74 |
head | 3.67e-08 | 56 |
oral opening | 5.01e-08 | 22 |
cranial skeletal system | 1.51e-07 | 11 |
anterior region of body | 2.26e-07 | 62 |
craniocervical region | 2.26e-07 | 62 |