FFCP PHASE1:Hg19::chr5:98265553..98265578,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:98265553..98265578,+ to FFCP PHASE1:Hg19::chr5:98265553..98265578,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:98265553..98265578,+ | |||
|coexpression_cluster_id=C704 | |||
|description=CAGE_peak_at_chr5:98265553..98265578,+ | |||
|id=chr5:98265553..98265578,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.52e-55!140;CL:0002057!2.85e-45!42;CL:0002087!1.17e-44!119;CL:0002031!3.94e-44!124;CL:0000037!3.01e-43!172;CL:0000566!3.01e-43!172;CL:0000860!3.05e-41!45;CL:0000988!2.19e-40!182;CL:0002032!2.72e-38!165;CL:0000837!2.72e-38!165;CL:0000766!3.37e-36!76;CL:0002009!2.85e-29!65;CL:0000557!2.41e-28!71;CL:0002194!2.07e-27!63;CL:0000576!2.07e-27!63;CL:0000040!2.07e-27!63;CL:0000559!2.07e-27!63;CL:0000839!2.80e-27!70;CL:0000763!5.07e-23!112;CL:0000049!5.07e-23!112;CL:0000791!3.21e-15!18;CL:0000789!3.21e-15!18;CL:0002420!3.21e-15!18;CL:0002419!3.21e-15!18;CL:0000790!3.21e-15!18;CL:0000838!2.35e-14!52;CL:0000542!6.54e-14!53;CL:0000051!6.54e-14!53;CL:0002393!2.02e-13!9;CL:0002397!2.02e-13!9;CL:0000094!3.40e-12!8;CL:0000134!7.83e-12!358;CL:0002320!4.19e-11!365;CL:0000084!4.47e-11!25;CL:0000827!4.47e-11!25;CL:0000219!3.29e-10!390;CL:0000081!3.97e-10!11;CL:0000624!1.14e-09!6;CL:0000625!8.01e-09!11;CL:0000048!4.17e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.08e-26;33!CL:0002057;1.08e-26;33!CL:0000576;4.14e-24;48!CL:0000766;1.61e-23;69!CL:0000094;3.06e-23;8!CL:0002087;1.72e-18;104!CL:0000624;3.28e-18;6!CL:0000473;1.76e-17;39!CL:0000234;1.76e-17;39!CL:0000791;2.45e-17;18!CL:0000789;2.45e-17;18!CL:0002419;2.45e-17;18!CL:0002393;3.20e-17;6!CL:0002397;3.20e-17;6!CL:0000081;1.75e-16;11!CL:0000084;8.71e-12;25!CL:0000738;4.05e-11;136!CL:0000898;1.65e-10;3!CL:0000875;2.60e-10;3!CL:0002396;2.60e-10;3!CL:0000775;7.53e-10;3!CL:0000767;2.62e-09;3!CL:0000226;3.07e-09;3!CL:0000842;3.07e-09;3!CL:0000623;3.39e-09;3!CL:0000763;3.88e-09;100!CL:0000542;7.38e-08;53!CL:0000815;1.53e-07;2!CL:0000792;1.53e-07;2!CL:0002677;1.53e-07;2!CL:0000771;1.66e-07;2!CL:0000988;3.42e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.78e-62,136;CL:0000860,7.88e-50,42;CL:0002057,7.88e-50,42;CL:0002087,2.11e-49,115;CL:0000037,8.53e-48,168;CL:0000766,7.70e-45,72;CL:0000988,1.17e-44,177;CL:0002032,9.94e-43,161;CL:0000837,9.94e-43,161;CL:0000473,1.42e-42,48;CL:0000234,1.42e-42,48;CL:0002031,1.94e-42,120;CL:0002009,1.59e-33,61;CL:0002194,1.97e-32,59;CL:0000576,1.97e-32,59;CL:0000040,1.97e-32,59;CL:0000559,1.97e-32,59;CL:0000557,7.82e-30,67;CL:0000763,2.13e-28,108;CL:0000049,2.13e-28,108;CL:0000839,3.34e-28,66;CL:0002393,7.45e-26,9;CL:0002397,7.45e-26,9;CL:0000094,2.47e-23,8;CL:0000624,3.75e-18,6;CL:0000791,2.12e-17,18;CL:0000789,2.12e-17,18;CL:0002420,2.12e-17,18;CL:0002419,2.12e-17,18;CL:0000790,2.12e-17,18;CL:0000081,1.50e-16,11;CL:0000134,2.57e-15,354;CL:0002320,9.50e-15,361;CL:0000838,4.77e-13,52;CL:0000219,9.44e-13,386;CL:0000542,1.02e-12,53;CL:0000051,1.02e-12,53;CL:0000084,7.87e-12,25;CL:0000827,7.87e-12,25;CL:0000898,1.67e-10,3;CL:0000048,2.54e-10,427;CL:0000875,2.64e-10,3;CL:0002396,2.64e-10,3;CL:0000034,3.52e-10,441;CL:0000723,5.49e-10,433;CL:0000775,6.50e-10,3;CL:0000767,2.48e-09,3;CL:0000623,3.03e-09,3;CL:0000825,3.03e-09,3;CL:0000226,3.49e-09,3;CL:0000842,3.49e-09,3;CL:0000815,1.53e-07,2;CL:0000792,1.53e-07,2;CL:0002677,1.53e-07,2;CL:0000771,1.63e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-34;42!CL:0000790;2.45e-17;18!CL:0000049;4.13e-08;108!CL:0000051;7.38e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.54e-31!102;UBERON:0003061!6.54e-31!102;UBERON:0002193!2.05e-26!112;UBERON:0002371!1.17e-24!80;UBERON:0001474!5.11e-23!86;UBERON:0004765!2.76e-18!101;UBERON:0001434!2.76e-18!101;UBERON:0002405!1.31e-16!115;UBERON:0002384!4.00e-10!375;UBERON:0003081!1.00e-07!216;UBERON:0002204!4.05e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.57e-28,98;UBERON:0003061,7.57e-28,98;UBERON:0002371,2.20e-25,76;UBERON:0002193,2.09e-24,108;UBERON:0001474,5.84e-23,82;UBERON:0002405,4.75e-21,93;UBERON:0004765,3.11e-20,90;UBERON:0001434,1.92e-17,100;UBERON:0002384,5.65e-14,371;UBERON:0003081,7.83e-09,203;UBERON:0002204,1.51e-07,167 | |||
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|short_description=p@chr5:98265553..98265578,+ | |||
}} | }} |
Latest revision as of 17:41, 30 July 2015
Short description: | p@chr5:98265553..98265578, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:98265553..98265578, + |
Coexpression cluster: | C704_Eosinophils_CD14CD16_Neutrophils_CD14_CD4_Basophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.57e-28 | 98 |
blood island | 7.57e-28 | 98 |
bone marrow | 2.20e-25 | 76 |
hemolymphoid system | 2.09e-24 | 108 |
bone element | 5.84e-23 | 82 |
immune system | 4.75e-21 | 93 |
skeletal element | 3.11e-20 | 90 |
skeletal system | 1.92e-17 | 100 |
connective tissue | 5.65e-14 | 371 |
lateral plate mesoderm | 7.83e-09 | 203 |
musculoskeletal system | 1.51e-07 | 167 |