FFCP PHASE1:Hg19::chr6:2940610..2940615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:2940610..2940615,+ | |||
|coexpression_cluster_id=C2572 | |||
|description=CAGE_peak_at_chr6:2940610..2940615,+ | |description=CAGE_peak_at_chr6:2940610..2940615,+ | ||
|id=chr6:2940610..2940615,+ | |id=chr6:2940610..2940615,+ | ||
|ontology_enrichment_celltype=CL:0002032!2.47e-36!165;CL:0000837!2.47e-36!165;CL:0000037!7.57e-36!172;CL:0000566!7.57e-36!172;CL:0000988!2.81e-35!182;CL:0000738!6.79e-32!140;CL:0002031!1.43e-30!124;CL:0002087!9.40e-29!119;CL:0000542!3.64e-21!53;CL:0000051!3.64e-21!53;CL:0000838!2.86e-20!52;CL:0000763!6.14e-16!112;CL:0000049!6.14e-16!112;CL:0000860!3.91e-13!45;CL:0000766!5.07e-13!76;CL:0000084!3.17e-12!25;CL:0000827!3.17e-12!25;CL:0000839!3.29e-12!70;CL:0000557!6.91e-12!71;CL:0002057!3.61e-11!42;CL:0002194!1.08e-09!63;CL:0000576!1.08e-09!63;CL:0000040!1.08e-09!63;CL:0000559!1.08e-09!63;CL:0000791!2.37e-09!18;CL:0000789!2.37e-09!18;CL:0002420!2.37e-09!18;CL:0002419!2.37e-09!18;CL:0000790!2.37e-09!18;CL:0002009!3.98e-09!65;CL:0000134!1.81e-07!358;CL:0000624!2.97e-07!6;CL:0002320!6.91e-07!365;CL:0000945!7.75e-07!24;CL:0000826!7.75e-07!24 | |ontology_enrichment_celltype=CL:0002032!2.47e-36!165;CL:0000837!2.47e-36!165;CL:0000037!7.57e-36!172;CL:0000566!7.57e-36!172;CL:0000988!2.81e-35!182;CL:0000738!6.79e-32!140;CL:0002031!1.43e-30!124;CL:0002087!9.40e-29!119;CL:0000542!3.64e-21!53;CL:0000051!3.64e-21!53;CL:0000838!2.86e-20!52;CL:0000763!6.14e-16!112;CL:0000049!6.14e-16!112;CL:0000860!3.91e-13!45;CL:0000766!5.07e-13!76;CL:0000084!3.17e-12!25;CL:0000827!3.17e-12!25;CL:0000839!3.29e-12!70;CL:0000557!6.91e-12!71;CL:0002057!3.61e-11!42;CL:0002194!1.08e-09!63;CL:0000576!1.08e-09!63;CL:0000040!1.08e-09!63;CL:0000559!1.08e-09!63;CL:0000791!2.37e-09!18;CL:0000789!2.37e-09!18;CL:0002420!2.37e-09!18;CL:0002419!2.37e-09!18;CL:0000790!2.37e-09!18;CL:0002009!3.98e-09!65;CL:0000134!1.81e-07!358;CL:0000624!2.97e-07!6;CL:0002320!6.91e-07!365;CL:0000945!7.75e-07!24;CL:0000826!7.75e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.98e-20;25!CL:0000791;3.52e-13;18!CL:0000789;3.52e-13;18!CL:0002419;3.52e-13;18!CL:0000623;4.89e-13;3!CL:0000542;1.42e-12;53!CL:0002087;1.10e-10;104!CL:0000860;2.37e-09;33!CL:0002057;2.37e-09;33!CL:0000097;1.52e-07;5!CL:0000473;3.41e-07;39!CL:0000234;3.41e-07;39!CL:0000763;4.74e-07;100!CL:0000988;4.81e-07;177!CL:0000738;9.15e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.32e-28,168;CL:0000988,6.08e-28,177;CL:0002032,8.28e-28,161;CL:0000837,8.28e-28,161;CL:0002031,1.23e-26,120;CL:0000738,1.92e-24,136;CL:0002087,1.99e-22,115;CL:0000838,7.89e-21,52;CL:0000084,1.60e-20,25;CL:0000827,1.60e-20,25;CL:0000542,2.35e-20,53;CL:0000051,2.35e-20,53;CL:0000791,2.43e-13,18;CL:0000789,2.43e-13,18;CL:0002420,2.43e-13,18;CL:0002419,2.43e-13,18;CL:0000790,2.43e-13,18;CL:0000623,4.00e-13,3;CL:0000825,4.00e-13,3;CL:0000763,3.43e-10,108;CL:0000049,3.43e-10,108;CL:0000860,1.52e-09,42;CL:0002057,1.52e-09,42;CL:0000893,1.74e-09,2;CL:0002489,1.74e-09,2;CL:0000809,1.74e-09,2;CL:0000808,1.74e-09,2;CL:0000894,1.74e-09,2;CL:0000806,1.74e-09,2;CL:0000807,1.74e-09,2;CL:0000805,1.74e-09,2;CL:0002425,1.74e-09,2;CL:0000134,8.12e-09,354;CL:0000839,1.09e-08,66;CL:0000557,1.62e-08,67;CL:0002320,1.76e-08,361;CL:0000473,4.42e-08,48;CL:0000234,4.42e-08,48;CL:0000766,9.80e-08,72;CL:0000097,1.53e-07,5;CL:0002028,1.53e-07,5;CL:0000219,2.65e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000790;3.52e-13;18!CL:0000051;1.42e-12;53!CL:0002425;2.14e-09;2!CL:0002057;9.97e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!1.22e-13!51;DOID:0060083!1.22e-13!51;DOID:0060058!6.38e-09!10;DOID:1240!1.53e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.51e-10;10!DOID:2531;4.75e-10;51!DOID:0060083;4.75e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.16e-14,51;DOID:0060083,1.16e-14,51;DOID:0060058,5.00e-10,10;DOID:1240,1.09e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.98e-16!102;UBERON:0003061!2.98e-16!102;UBERON:0002193!3.47e-14!112;UBERON:0001474!9.16e-11!86;UBERON:0002371!4.89e-10!80;UBERON:0002405!9.52e-10!115;UBERON:0004765!1.42e-07!101;UBERON:0001434!1.42e-07!101;UBERON:0002384!3.62e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!2.98e-16!102;UBERON:0003061!2.98e-16!102;UBERON:0002193!3.47e-14!112;UBERON:0001474!9.16e-11!86;UBERON:0002371!4.89e-10!80;UBERON:0002405!9.52e-10!115;UBERON:0004765!1.42e-07!101;UBERON:0001434!1.42e-07!101;UBERON:0002384!3.62e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.37e-09,371;UBERON:0002390,6.75e-08,98;UBERON:0003061,6.75e-08,98;UBERON:0002405,2.20e-07,93;UBERON:0002371,3.48e-07,76;UBERON:0002193,7.66e-07,108 | |||
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|short_description=p@chr6:2940610..2940615,+ | |short_description=p@chr6:2940610..2940615,+ | ||
}} | }} |
Latest revision as of 23:20, 30 July 2015
Short description: | p@chr6:2940610..2940615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:2940610..2940615, + |
Coexpression cluster: | C2572_NK_chronic_embryonic_lymphoma_epithelioid_acute_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.37e-09 | 371 |
hematopoietic system | 6.75e-08 | 98 |
blood island | 6.75e-08 | 98 |
immune system | 2.20e-07 | 93 |
bone marrow | 3.48e-07 | 76 |
hemolymphoid system | 7.66e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.16e-14 | 51 |
immune system cancer | 1.16e-14 | 51 |
lymphoma | 5.00e-10 | 10 |
leukemia | 1.09e-08 | 39 |