FFCP PHASE1:Hg19::chr8:125827922..125827927,-: Difference between revisions
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|id=chr8:125827922..125827927,-
|short_description=p2@ENST00000533516
|description=CAGE_peak_2_at_ENST00000533516_5end
|association_with_transcript=0bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000533516_5end | |||
|cluster_id=chr8:125827922..125827927,- | |||
|description=CAGE_peak_2_at_ENST00000533516_5end | |||
|id=chr8:125827922..125827927,- | |||
|ontology_enrichment_celltype=CL:0002057!2.53e-43!42;CL:0002009!1.50e-42!65;CL:0002194!1.72e-41!63;CL:0000576!1.72e-41!63;CL:0000040!1.72e-41!63;CL:0000559!1.72e-41!63;CL:0000860!7.75e-40!45;CL:0000557!4.49e-38!71;CL:0000766!3.70e-37!76;CL:0000839!2.50e-36!70;CL:0002087!2.65e-24!119;CL:0000738!2.72e-24!140;CL:0000763!2.69e-23!112;CL:0000049!2.69e-23!112;CL:0002031!5.80e-20!124;CL:0000037!1.72e-17!172;CL:0000566!1.72e-17!172;CL:0000988!7.93e-17!182;CL:0002032!2.36e-14!165;CL:0000837!2.36e-14!165;CL:0000048!2.06e-09!430;CL:0002320!2.54e-09!365;CL:0000134!3.34e-09!358;CL:0000723!4.58e-09!436;CL:0000842!6.85e-09!3;CL:0000034!1.29e-08!444;CL:0002619!2.46e-08!3;CL:0000219!1.06e-07!390;CL:0002393!5.71e-07!9;CL:0002397!5.71e-07!9;CL:0000224!9.94e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.72e-21;33!CL:0002057;9.72e-21;33!CL:0002393;2.07e-18;6!CL:0002397;2.07e-18;6!CL:0000576;2.63e-17;48!CL:0000226;1.27e-16;3!CL:0000842;1.27e-16;3!CL:0000473;1.92e-15;39!CL:0000234;1.92e-15;39!CL:0002591;6.42e-13;1!CL:0000766;4.70e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.69e-33,48;CL:0000234,1.69e-33,48;CL:0000860,3.09e-32,42;CL:0002057,3.09e-32,42;CL:0002194,1.65e-26,59;CL:0000576,1.65e-26,59;CL:0000040,1.65e-26,59;CL:0000559,1.65e-26,59;CL:0002009,1.32e-25,61;CL:0000766,2.39e-25,72;CL:0000839,1.39e-23,66;CL:0000557,3.24e-23,67;CL:0002087,5.35e-18,115;CL:0000738,2.44e-17,136;CL:0000226,1.08e-16,3;CL:0000842,1.08e-16,3;CL:0000763,1.99e-16,108;CL:0000049,1.99e-16,108;CL:0000037,1.08e-13,168;CL:0000988,6.71e-13,177;CL:0002591,8.64e-13,1;CL:0002393,1.51e-12,9;CL:0002397,1.51e-12,9;CL:0002031,2.33e-12,120;CL:0002032,1.77e-10,161;CL:0000837,1.77e-10,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.72e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.01e-37!80;UBERON:0001474!1.54e-33!86;UBERON:0002390!4.33e-32!102;UBERON:0003061!4.33e-32!102;UBERON:0002193!3.60e-28!112;UBERON:0004765!6.31e-27!101;UBERON:0001434!6.31e-27!101;UBERON:0002405!2.53e-22!115;UBERON:0002204!4.46e-20!167;UBERON:0003081!9.51e-15!216;UBERON:0002384!4.29e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;4.29e-07;2!UBERON:0002012;4.29e-07;2!UBERON:0008886;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.15e-21,98;UBERON:0003061,2.15e-21,98;UBERON:0002371,2.52e-20,76;UBERON:0002193,2.87e-19,108;UBERON:0001474,9.59e-19,82;UBERON:0004765,5.84e-17,90;UBERON:0002405,2.28e-16,93;UBERON:0001434,4.00e-15,100;UBERON:0003081,5.36e-11,203;UBERON:0002204,4.91e-10,167;UBERON:0000078,4.98e-07,2;UBERON:0007497,4.98e-07,2;UBERON:0003643,4.98e-07,2;UBERON:0003504,4.98e-07,2;UBERON:0003469,4.98e-07,2;UBERON:0003496,4.98e-07,2;UBERON:0002012,4.98e-07,2;UBERON:0008886,4.98e-07,2;UBERON:0007303,4.98e-07,2;UBERON:0002061,4.98e-07,2;UBERON:0005432,4.98e-07,2;UBERON:0004363,4.98e-07,2 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15148819429164,0.464448369948228,0,0,0,0,0,0,1.66198622559563,2.60707781711184,4.12320654360118,0.671746422719773,0.32389366601898,0.77272670290256,0.145398238779565,0,0.242584061187816,1.16214518452842,0.411167888021826,0.619412741790207,0.28769239232215,2.81776777182011,1.18241114944293,0.344745680736619,0.645484683583826,0,0.376484679085209,0.545812300115692,0.898893937780338,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.580418477257168,3.40431134814684,1.24564449799115,0,1.0429658368404,1.08594422352558,0,1.84138817993782,0.632924774881769,0,0.212604299965044,0.209658645508376,0,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0.358121926479791,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.82707210449155,2.15714200818617,1.38745825144478,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0.545545977607678,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0.688859918643263,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000533516 | |||
}} | }} |
Latest revision as of 14:41, 31 July 2015
Short description: | p2@ENST00000533516 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000533516_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533516_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.69e-33 | 48 |
phagocyte | 1.69e-33 | 48 |
classical monocyte | 3.09e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.09e-32 | 42 |
monopoietic cell | 1.65e-26 | 59 |
monocyte | 1.65e-26 | 59 |
monoblast | 1.65e-26 | 59 |
promonocyte | 1.65e-26 | 59 |
macrophage dendritic cell progenitor | 1.32e-25 | 61 |
myeloid leukocyte | 2.39e-25 | 72 |
myeloid lineage restricted progenitor cell | 1.39e-23 | 66 |
granulocyte monocyte progenitor cell | 3.24e-23 | 67 |
nongranular leukocyte | 5.35e-18 | 115 |
leukocyte | 2.44e-17 | 136 |
single nucleate cell | 1.08e-16 | 3 |
mononuclear cell | 1.08e-16 | 3 |
myeloid cell | 1.99e-16 | 108 |
common myeloid progenitor | 1.99e-16 | 108 |
hematopoietic stem cell | 1.08e-13 | 168 |
hematopoietic cell | 6.71e-13 | 177 |
smooth muscle cell of the pulmonary artery | 8.64e-13 | 1 |
intermediate monocyte | 1.51e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.51e-12 | 9 |
hematopoietic lineage restricted progenitor cell | 2.33e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.77e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.15e-21 | 98 |
blood island | 2.15e-21 | 98 |
bone marrow | 2.52e-20 | 76 |
hemolymphoid system | 2.87e-19 | 108 |
bone element | 9.59e-19 | 82 |
skeletal element | 5.84e-17 | 90 |
immune system | 2.28e-16 | 93 |
skeletal system | 4.00e-15 | 100 |
lateral plate mesoderm | 5.36e-11 | 203 |
musculoskeletal system | 4.91e-10 | 167 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.98e-07 | 2 |
developing epithelial placode | 4.98e-07 | 2 |
respiratory system arterial blood vessel | 4.98e-07 | 2 |
respiratory system blood vessel | 4.98e-07 | 2 |
respiratory system artery | 4.98e-07 | 2 |
head blood vessel | 4.98e-07 | 2 |
pulmonary artery | 4.98e-07 | 2 |
pulmonary vascular system | 4.98e-07 | 2 |
pharyngeal vasculature | 4.98e-07 | 2 |
truncus arteriosus | 4.98e-07 | 2 |
aortic sac | 4.98e-07 | 2 |
pharyngeal arch artery | 4.98e-07 | 2 |