FFCP PHASE1:Hg19::chr9:38068437..38068455,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_ENST00000540557_5end | |association_with_transcript=228bp_to_ENST00000540557_5end | ||
|cluster_id=chr9:38068437..38068455,- | |||
|coexpression_cluster_id=C193 | |coexpression_cluster_id=C193 | ||
|description=CAGE_peak_3_at_ENST00000540557_5end | |description=CAGE_peak_3_at_ENST00000540557_5end | ||
|id=chr9:38068437..38068455,- | |id=chr9:38068437..38068455,- | ||
|ontology_enrichment_celltype=CL:0000669;4.27e-17;4!CL:0002603;2.36e-13;3!CL:0002575;6.80e-10;2!CL:1000507;9.29e-10;10!CL:1000494;9.29e-10;10!CL:0000306;1.56e-09;4!CL:0002222;1.56e-09;4!CL:0002224;1.56e-09;4!CL:0002554;2.46e-09;2!CL:0000650;6.20e-09;2!CL:1000500;6.20e-09;2!CL:1000618;6.20e-09;2!CL:1001318;6.20e-09;2!CL:0002173;6.20e-09;2!CL:0002367;6.20e-09;2!CL:0002564;7.77e-07;3 | |ontology_enrichment_celltype=CL:0000183!2.84e-09!59;CL:0000055!3.71e-09!180;CL:0002321!3.18e-08!248;CL:0000220!3.62e-08!246;CL:0000187!1.05e-07!54;CL:0000680!1.45e-07!57;CL:0000056!1.45e-07!57;CL:0000355!1.45e-07!57 | ||
| | |ontology_enrichment_celltype_v019=CL:0000669;4.27e-17;4!CL:0002603;2.36e-13;3!CL:0002575;6.80e-10;2!CL:1000507;9.29e-10;10!CL:1000494;9.29e-10;10!CL:0000306;1.56e-09;4!CL:0002222;1.56e-09;4!CL:0002224;1.56e-09;4!CL:0002554;2.46e-09;2!CL:0000650;6.20e-09;2!CL:1000500;6.20e-09;2!CL:1000618;6.20e-09;2!CL:1001318;6.20e-09;2!CL:0002173;6.20e-09;2!CL:0002367;6.20e-09;2!CL:0002564;7.77e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000669,5.55e-17,4;CL:0002603,2.15e-13,3;CL:0002575,6.29e-10,2;CL:1000507,1.17e-09,10;CL:1000494,1.17e-09,10;CL:0000306,1.37e-09,4;CL:0002222,1.37e-09,4;CL:0002224,1.37e-09,4;CL:0002554,2.24e-09,2;CL:0000650,8.61e-09,2;CL:1000500,8.61e-09,2;CL:1000618,8.61e-09,2;CL:1001318,8.61e-09,2;CL:0002173,8.61e-09,2;CL:0002367,1.76e-08,2;CL:0002564,8.03e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001801;5.11e-13;14!UBERON:0004211;9.29e-10;10!UBERON:0009773;9.29e-10;10!UBERON:0001231;9.29e-10;10!UBERON:0004810;9.29e-10;10!UBERON:0010077;1.56e-09;4!UBERON:0005389;1.56e-09;4!UBERON:0000484;1.56e-09;4!UBERON:0000965;1.56e-09;4!UBERON:0001803;1.56e-09;4!UBERON:0000019;2.41e-09;19!UBERON:0000047;2.41e-09;19!UBERON:0004088;2.41e-09;19!UBERON:0010230;2.41e-09;19!UBERON:0003567;6.20e-09;2!UBERON:0003838;6.20e-09;2!UBERON:0003586;6.20e-09;2!UBERON:0005169;6.20e-09;2!UBERON:0002321;6.20e-09;2!UBERON:0005969;6.20e-09;2!UBERON:0005215;6.20e-09;2!UBERON:0002303;6.20e-09;2!UBERON:0002319;6.20e-09;2!UBERON:0003956;6.20e-09;2!UBERON:0000970;7.89e-09;20!UBERON:0011135;1.70e-08;5!UBERON:0002216;1.70e-08;5!UBERON:0011134;1.70e-08;5!UBERON:0002209;1.70e-08;5!UBERON:0002213;1.70e-08;5!UBERON:0007844;1.70e-08;5!UBERON:0011138;1.70e-08;5!UBERON:0001130;1.70e-08;5!UBERON:0001066;1.70e-08;5!UBERON:0001468;1.70e-08;5!UBERON:0002104;2.30e-08;21!UBERON:0001456;2.30e-08;21!UBERON:0000020;1.48e-07;23!UBERON:0001032;3.34e-07;24!UBERON:0004456;3.34e-07;24!UBERON:0002037;7.05e-07;6!UBERON:0002242;7.77e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.66e-14!312;UBERON:0000475!2.07e-13!365;UBERON:0000483!2.16e-13!309;UBERON:0000481!3.04e-12!347;UBERON:0000468!7.46e-11!659;UBERON:0000477!4.42e-10!286;UBERON:0000467!7.84e-08!625;UBERON:0000480!1.08e-07!626;UBERON:0000923!1.22e-07!604;UBERON:0005291!1.22e-07!604;UBERON:0006598!1.22e-07!604;UBERON:0002532!1.22e-07!604;UBERON:0000922!1.58e-07!612;UBERON:0002050!1.67e-07!605;UBERON:0005423!1.67e-07!605;UBERON:0000914!3.73e-07!83;UBERON:0002329!3.73e-07!83;UBERON:0003077!3.73e-07!83;UBERON:0003059!3.73e-07!83;UBERON:0007282!3.73e-07!83;UBERON:0009618!3.73e-07!83;UBERON:0007285!3.73e-07!83;UBERON:0000033!5.04e-07!123;UBERON:0000486!6.02e-07!82;UBERON:0005256!7.50e-07!143;UBERON:0002385!7.56e-07!63;UBERON:0001015!7.56e-07!63;UBERON:0000383!7.56e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;5.11e-13;14!UBERON:0004211;9.29e-10;10!UBERON:0009773;9.29e-10;10!UBERON:0001231;9.29e-10;10!UBERON:0004810;9.29e-10;10!UBERON:0010077;1.56e-09;4!UBERON:0005389;1.56e-09;4!UBERON:0000484;1.56e-09;4!UBERON:0000965;1.56e-09;4!UBERON:0001803;1.56e-09;4!UBERON:0000019;2.41e-09;19!UBERON:0000047;2.41e-09;19!UBERON:0004088;2.41e-09;19!UBERON:0010230;2.41e-09;19!UBERON:0003567;6.20e-09;2!UBERON:0003838;6.20e-09;2!UBERON:0003586;6.20e-09;2!UBERON:0005169;6.20e-09;2!UBERON:0002321;6.20e-09;2!UBERON:0005969;6.20e-09;2!UBERON:0005215;6.20e-09;2!UBERON:0002303;6.20e-09;2!UBERON:0002319;6.20e-09;2!UBERON:0003956;6.20e-09;2!UBERON:0000970;7.89e-09;20!UBERON:0011135;1.70e-08;5!UBERON:0002216;1.70e-08;5!UBERON:0011134;1.70e-08;5!UBERON:0002209;1.70e-08;5!UBERON:0002213;1.70e-08;5!UBERON:0007844;1.70e-08;5!UBERON:0011138;1.70e-08;5!UBERON:0001130;1.70e-08;5!UBERON:0001066;1.70e-08;5!UBERON:0001468;1.70e-08;5!UBERON:0002104;2.30e-08;21!UBERON:0001456;2.30e-08;21!UBERON:0000020;1.48e-07;23!UBERON:0001032;3.34e-07;24!UBERON:0004456;3.34e-07;24!UBERON:0002037;7.05e-07;6!UBERON:0002242;7.77e-07;3 | |||
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| ||
|short_description=p3@ENST00000540557 | |short_description=p3@ENST00000540557 | ||
}} | }} |
Latest revision as of 02:02, 1 August 2015
Short description: | p3@ENST00000540557 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000540557_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 228bp_to_ENST00000540557_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 5.55e-17 | 4 |
astrocyte of the cerebellum | 2.15e-13 | 3 |
central nervous system pericyte | 6.29e-10 | 2 |
kidney tubule cell | 1.17e-09 | 10 |
nephron tubule epithelial cell | 1.17e-09 | 10 |
crystallin accumulating cell | 1.37e-09 | 4 |
vertebrate lens cell | 1.37e-09 | 4 |
lens epithelial cell | 1.37e-09 | 4 |
fibroblast of lymphatic vessel | 2.24e-09 | 2 |
mesangial cell | 8.61e-09 | 2 |
kidney interstitial cell | 8.61e-09 | 2 |
juxtaglomerular complex cell | 8.61e-09 | 2 |
renal interstitial pericyte | 8.61e-09 | 2 |
extraglomerular mesangial cell | 8.61e-09 | 2 |
trabecular meshwork cell | 1.76e-08 | 2 |
nucleus pulposus cell of intervertebral disc | 8.03e-07 | 3 |