FFCP PHASE1:Hg19::chrX:48554974..48554979,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:48554974..48554979,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_at_chrX:48554974..48554979,- | |||
|id=chrX:48554974..48554979,- | |||
|ontology_enrichment_celltype=CL:0000738!6.13e-30!140;CL:0002057!4.08e-28!42;CL:0000860!1.87e-27!45;CL:0002087!1.49e-26!119;CL:0002031!3.47e-25!124;CL:0000037!1.88e-24!172;CL:0000566!1.88e-24!172;CL:0000988!3.75e-23!182;CL:0002032!1.08e-22!165;CL:0000837!1.08e-22!165;CL:0000766!1.17e-20!76;CL:0000557!1.55e-15!71;CL:0002194!1.85e-15!63;CL:0000576!1.85e-15!63;CL:0000040!1.85e-15!63;CL:0000559!1.85e-15!63;CL:0002009!3.02e-15!65;CL:0000839!3.06e-15!70;CL:0000763!6.36e-13!112;CL:0000049!6.36e-13!112;CL:0000838!2.97e-10!52;CL:0000542!7.92e-10!53;CL:0000051!7.92e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.33e-40;33!CL:0002057;4.33e-40;33!CL:0000473;3.05e-28;39!CL:0000234;3.05e-28;39!CL:0000576;3.01e-25;48!CL:0000766;4.68e-24;69!CL:0000094;2.01e-22;8!CL:0000081;5.24e-16;11!CL:0000775;2.77e-12;3!CL:0002087;3.08e-11;104!CL:0000763;2.70e-10;100!CL:0000738;1.13e-09;136!CL:0000771;6.44e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.55e-49,72;CL:0000860,3.75e-47,42;CL:0002057,3.75e-47,42;CL:0000473,2.00e-40,48;CL:0000234,2.00e-40,48;CL:0000738,2.03e-40,136;CL:0002032,1.42e-32,161;CL:0000837,1.42e-32,161;CL:0000037,1.77e-32,168;CL:0000839,6.96e-32,66;CL:0000557,2.60e-31,67;CL:0002194,5.15e-31,59;CL:0000576,5.15e-31,59;CL:0000040,5.15e-31,59;CL:0000559,5.15e-31,59;CL:0002031,6.39e-31,120;CL:0000988,2.65e-30,177;CL:0002009,8.40e-30,61;CL:0000763,8.45e-30,108;CL:0000049,8.45e-30,108;CL:0002087,8.30e-29,115;CL:0000094,2.04e-22,8;CL:0000081,5.29e-16,11;CL:0000775,2.07e-12,3;CL:0000134,8.70e-11,354;CL:0002320,2.24e-10,361;CL:0000219,1.22e-09,386;CL:0000771,6.59e-09,2;CL:0000034,8.71e-08,441;CL:0000048,8.92e-08,427;CL:0000723,1.59e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.86e-34;42!CL:0000049;9.79e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.24e-19!102;UBERON:0003061!9.24e-19!102;UBERON:0002193!1.66e-15!112;UBERON:0002371!4.26e-14!80;UBERON:0001474!5.60e-13!86;UBERON:0002405!3.15e-10!115;UBERON:0004765!7.19e-09!101;UBERON:0001434!7.19e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.44e-33,98;UBERON:0003061,5.44e-33,98;UBERON:0002193,3.57e-29,108;UBERON:0002371,5.00e-29,76;UBERON:0001474,2.10e-26,82;UBERON:0002405,2.37e-24,93;UBERON:0004765,1.89e-23,90;UBERON:0001434,2.02e-20,100;UBERON:0003081,1.25e-12,203;UBERON:0002204,1.92e-10,167;UBERON:0002384,8.11e-10,371 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.305653622991805,0.328402357799783,0.236132343941038,1.18009283054671,0,2.16742572642506,0.919421224478927,0.6024118375565,0,0.154934401160603,0,1.17440175733939,3.87796785972314,2.20598892217156,3.25516306073778,0,0,0,1.16318591023652,1.13362783106643,1.4555043671269,0.464858073811369,2.46700732813095,1.85823822537062,3.45230870786581,2.81776777182011,4.49316236788312,0.344745680736619,2.5819387343353,0,1.12945403725563,0.818718450173537,2.02251136000576,1.53041946185451,0.320929027076094,1.27867425159808,3.95821560224059,2.19410023383795,1.27867425159808,0.290209238628584,0.56738522469114,2.4912889959823,2.51248665256743,5.73631210262222,6.5156653411535,0.605399502633369,0.368277635987565,0.949387162322653,0.211255286311942,0.425208599930087,0.838634582033504,1.68492946719743,0.600707571366025,0.48217676009124,1.14005097496499,0,0.547992461293902,1.75996244461323,0,0,0,0.400395987036012,0.574752439954483,0,0,1.70763890732835,0.587237189370939,0.382273228125229,0,1.12101712596307,0,0.393419540227666,1.17903228824749,2.05601498999509,0,0.651844533267181,0,1.94826728407911,0.334231370655521,1.17842362989935,0.221533894583621,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0.444859689486181,0.535081656179426,1.04535523804977,0.113309342697566,0.383220493601921,0,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0,2.49861453104692,0,0,1.20964045934839,1.06976078313403,0.868946423296794,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0.417989933073621,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,5.27121669744253,7.75560528296651,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0.23486899728753,0.323745888736263,0.280901613404497,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.591534000199219,0,0.241011029883482,0,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.829312462163088,1.00883967391873,1.2624243342638,0.063497894292169,0.763976851116555,0,1.71072446022705,0,0,0,0.224262168690721,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.788123040807709,1.94064817373566,1.79680250791648,0.254094624222463,0,0.773288812777695,0.167516265334349,0,6.74106321552464,2.99161459204025,6.63064821497657,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0.391602314925481,0,0.620304078368662,0.431428401637234,0.533637789017222,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0.541892875087706,0,0,0,0,0,0,0,0.328014645699706,0,0,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,2.02979043692868,0.764637207142375,1.70894156152249,0.476463550915578,0,1.94541993357815,1.62009431171434,2.37937552888281,0.106824071127473,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.390776190804081,0.556812347790485,0,0,0,0,0,0.146508179271894,0,0.334330152832435,0,0.23874448473769,0,0,0,0.281338832821026,0.445234820091624,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0.347249989866585,0.885741385813839,0.120596438625408,0,0.774054819518572,0.295547618953547,0,0,0.41827123283581,0.0769502585037971,0,0.23056390438806,0,0,0.31900115973192,0,0.533034776018635,0,0,0.166211681900156,0,0.19606253431774,0,0,0.158936578980379,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0.0730893170861856,0.410577285266046,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0.273810757783986,0,0,0.525774708558629,0,0,0,0,0,0,0,0,2.32991899054908,0,0.0824158583811665,0,0.196854963029498,0.169346664131569,0,0.272406812223151,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0.328370082997356,0,0,0,1.32506888912221,0,0.39669780522807,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0.250381861413,0,0.998361463831671,0.124192805882767,0.276697269872462,0.37494122388632,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0.336749488765919,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0.39997479170986,0.213383459388282,0.344429959321631,0,0,0,0,0.255788742607303,0.107824811396682,0,0.218419276384028,0.169732529954025,0,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0.703484977438482,0.127762427639595,0,0,0,0.455324382702595,0,0.230467975111559,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0.314231179832004,0.280272163313789,0,0,0.47775168788705,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0.237840181555137,0,0.219881033490858,0,0,0,0.470317296361523,0,0.235676547101626,0.588925401344836,0.594092800654172,0,0,0.187967835959707,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.506794004045748,0,0,0.18378979906969,0,0,0.267964130156178,0,0.517164979309476,0,0,0.0645889098360061,1.55186785739645,0.112131862580613,0,0,0,0.342233301085281,0.202056159043763,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:48554974..48554979,- | |||
}} |
Latest revision as of 08:33, 1 August 2015
Short description: | p@chrX:48554974..48554979, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:48554974..48554979, - |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.55e-49 | 72 |
classical monocyte | 3.75e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.75e-47 | 42 |
defensive cell | 2.00e-40 | 48 |
phagocyte | 2.00e-40 | 48 |
leukocyte | 2.03e-40 | 136 |
hematopoietic oligopotent progenitor cell | 1.42e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.42e-32 | 161 |
hematopoietic stem cell | 1.77e-32 | 168 |
myeloid lineage restricted progenitor cell | 6.96e-32 | 66 |
granulocyte monocyte progenitor cell | 2.60e-31 | 67 |
monopoietic cell | 5.15e-31 | 59 |
monocyte | 5.15e-31 | 59 |
monoblast | 5.15e-31 | 59 |
promonocyte | 5.15e-31 | 59 |
hematopoietic lineage restricted progenitor cell | 6.39e-31 | 120 |
hematopoietic cell | 2.65e-30 | 177 |
macrophage dendritic cell progenitor | 8.40e-30 | 61 |
myeloid cell | 8.45e-30 | 108 |
common myeloid progenitor | 8.45e-30 | 108 |
nongranular leukocyte | 8.30e-29 | 115 |
granulocyte | 2.04e-22 | 8 |
blood cell | 5.29e-16 | 11 |
neutrophil | 2.07e-12 | 3 |
mesenchymal cell | 8.70e-11 | 354 |
connective tissue cell | 2.24e-10 | 361 |
motile cell | 1.22e-09 | 386 |
eosinophil | 6.59e-09 | 2 |
stem cell | 8.71e-08 | 441 |
multi fate stem cell | 8.92e-08 | 427 |
somatic stem cell | 1.59e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.44e-33 | 98 |
blood island | 5.44e-33 | 98 |
hemolymphoid system | 3.57e-29 | 108 |
bone marrow | 5.00e-29 | 76 |
bone element | 2.10e-26 | 82 |
immune system | 2.37e-24 | 93 |
skeletal element | 1.89e-23 | 90 |
skeletal system | 2.02e-20 | 100 |
lateral plate mesoderm | 1.25e-12 | 203 |
musculoskeletal system | 1.92e-10 | 167 |
connective tissue | 8.11e-10 | 371 |