FFCP PHASE1:Mm9::chr2:31937072..31937082,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |MCL_coexpression_id=33 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:31937072..31937082,+ | |||
|description=CAGE_peak_at_chr2:31937072..31937082,+ | |description=CAGE_peak_at_chr2:31937072..31937082,+ | ||
|id=chr2:31937072..31937082,+ | |id=chr2:31937072..31937082,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.08e-12!32;CL:0002032!1.08e-12!32;CL:0000037!1.08e-12!32;CL:0000566!1.08e-12!32;CL:0000837!1.08e-12!32;CL:0002320!9.09e-11!46;CL:0000134!9.09e-11!46;CL:0002031!1.72e-10!25;CL:0000049!1.13e-08!19;CL:0000738!1.71e-08!17;CL:0002087!1.71e-08!17;CL:0000763!3.58e-08!16;CL:0000219!5.74e-08!54;CL:0000557!1.20e-07!7 | |ontology_enrichment_celltype=CL:0000988!1.08e-12!32;CL:0002032!1.08e-12!32;CL:0000037!1.08e-12!32;CL:0000566!1.08e-12!32;CL:0000837!1.08e-12!32;CL:0002320!9.09e-11!46;CL:0000134!9.09e-11!46;CL:0002031!1.72e-10!25;CL:0000049!1.13e-08!19;CL:0000738!1.71e-08!17;CL:0002087!1.71e-08!17;CL:0000763!3.58e-08!16;CL:0000219!5.74e-08!54;CL:0000557!1.20e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.05e-14,2;CL:0000738,1.92e-14,17;CL:0002087,1.92e-14,17;CL:0000084,1.98e-10,11;CL:0000827,1.98e-10,11;CL:0002031,9.85e-10,25;CL:0000838,1.40e-09,12;CL:0000542,7.36e-09,13;CL:0000051,7.36e-09,13;CL:0000624,1.79e-08,8;CL:0000815,5.62e-08,1;CL:0000792,5.62e-08,1;CL:0002194,8.35e-08,4;CL:0000766,8.35e-08,4;CL:0000234,8.35e-08,4;CL:0000576,8.35e-08,4;CL:0000235,8.35e-08,4;CL:0000864,8.35e-08,4;CL:0002009,8.35e-08,4;CL:0000040,8.35e-08,4;CL:0000559,8.35e-08,4;CL:0000791,1.38e-07,9;CL:0000789,1.38e-07,9;CL:0002420,1.38e-07,9;CL:0002419,1.38e-07,9;CL:0000790,1.38e-07,9;CL:0000988,1.56e-07,32;CL:0002032,1.56e-07,32;CL:0000037,1.56e-07,32;CL:0000837,1.56e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.73e-26!48;UBERON:0002390!9.96e-25!45;UBERON:0003061!9.96e-25!45;UBERON:0002405!4.25e-20!70;UBERON:0004177!9.98e-14!29;UBERON:0003408!5.13e-13!24;UBERON:0002370!3.69e-12!23;UBERON:0000974!3.69e-12!23;UBERON:0004807!3.69e-12!23;UBERON:0005058!3.69e-12!23;UBERON:0003351!3.69e-12!23;UBERON:0009113!3.69e-12!23;UBERON:0003295!3.69e-12!23;UBERON:0009722!3.69e-12!23;UBERON:0005562!3.69e-12!23;UBERON:0007690!3.69e-12!23;UBERON:0003081!3.92e-12!88;UBERON:0002371!1.01e-11!16;UBERON:0006562!2.09e-11!24;UBERON:0001557!2.09e-11!24;UBERON:0001042!2.09e-11!24;UBERON:0008814!2.09e-11!24;UBERON:0009145!2.09e-11!24;UBERON:0002384!9.09e-11!46;UBERON:0000072!1.68e-09!27;UBERON:0005057!1.75e-09!51;UBERON:0000926!4.07e-09!193;UBERON:0004120!4.07e-09!193;UBERON:0006603!4.07e-09!193;UBERON:0001004!1.23e-08!42;UBERON:0001041!4.80e-08!92;UBERON:0000065!5.41e-08!41;UBERON:0001474!2.43e-07!22;UBERON:0004765!2.43e-07!22;UBERON:0001434!2.43e-07!22;UBERON:0000077!4.49e-07!97;UBERON:0000063!4.91e-07!35 | |ontology_enrichment_uberon=UBERON:0002193!7.73e-26!48;UBERON:0002390!9.96e-25!45;UBERON:0003061!9.96e-25!45;UBERON:0002405!4.25e-20!70;UBERON:0004177!9.98e-14!29;UBERON:0003408!5.13e-13!24;UBERON:0002370!3.69e-12!23;UBERON:0000974!3.69e-12!23;UBERON:0004807!3.69e-12!23;UBERON:0005058!3.69e-12!23;UBERON:0003351!3.69e-12!23;UBERON:0009113!3.69e-12!23;UBERON:0003295!3.69e-12!23;UBERON:0009722!3.69e-12!23;UBERON:0005562!3.69e-12!23;UBERON:0007690!3.69e-12!23;UBERON:0003081!3.92e-12!88;UBERON:0002371!1.01e-11!16;UBERON:0006562!2.09e-11!24;UBERON:0001557!2.09e-11!24;UBERON:0001042!2.09e-11!24;UBERON:0008814!2.09e-11!24;UBERON:0009145!2.09e-11!24;UBERON:0002384!9.09e-11!46;UBERON:0000072!1.68e-09!27;UBERON:0005057!1.75e-09!51;UBERON:0000926!4.07e-09!193;UBERON:0004120!4.07e-09!193;UBERON:0006603!4.07e-09!193;UBERON:0001004!1.23e-08!42;UBERON:0001041!4.80e-08!92;UBERON:0000065!5.41e-08!41;UBERON:0001474!2.43e-07!22;UBERON:0004765!2.43e-07!22;UBERON:0001434!2.43e-07!22;UBERON:0000077!4.49e-07!97;UBERON:0000063!4.91e-07!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.41e-14,23;UBERON:0000974,4.41e-14,23;UBERON:0004807,4.41e-14,23;UBERON:0005058,4.41e-14,23;UBERON:0003351,4.41e-14,23;UBERON:0009113,4.41e-14,23;UBERON:0003295,4.41e-14,23;UBERON:0009722,4.41e-14,23;UBERON:0005562,4.41e-14,23;UBERON:0007690,4.41e-14,23;UBERON:0006562,1.78e-13,24;UBERON:0003408,1.78e-13,24;UBERON:0001557,1.78e-13,24;UBERON:0001042,1.78e-13,24;UBERON:0008814,1.78e-13,24;UBERON:0009145,1.78e-13,24;UBERON:0002193,2.78e-13,48;UBERON:0002405,2.78e-13,48;UBERON:0000072,6.32e-12,27;UBERON:0002390,1.77e-11,45;UBERON:0003061,1.77e-11,45;UBERON:0004177,4.54e-11,29;UBERON:0005057,4.54e-11,29;UBERON:0000077,4.41e-09,35;UBERON:0007811,8.15e-09,36;UBERON:0000029,4.10e-08,1;UBERON:0001097,4.10e-08,1;UBERON:0003968,4.10e-08,1;UBERON:0001467,4.10e-08,1;UBERON:0000065,1.13e-07,41;UBERON:0001004,1.78e-07,42;UBERON:0000153,2.74e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0.234064526321993,0,0.0797721589953364,4.28001824828014,2.97229368224591,0.666219523631325,0,0,0.788655413395594,0.548457734422955,0.42438965179803,0.0850432901510698,1.58865521921416,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.593768556259299,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.723245292907558,1.50791283939272,2.17562273527484,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.683471138605126,0.686334519619568,0.169978429993855,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,2.52808896502543,0.202725215290164,0,0.389762468933385,0.179026695667481,1.19208812868759,0.841368146639782,1.03382669022204,0.504832249740738,0.990688486514998,1.00826185136841,0.877120926657772,0.769694733122636,1.98690733708667,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0.234064526321993,0,0.0797721589953364,4.28001824828014,2.97229368224591,0.666219523631325,0,0,0.788655413395594,0.548457734422955,0.42438965179803,0.0850432901510698,1.58865521921416,0.783599367416806,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.593768556259299,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.723245292907558,1.50791283939272,2.17562273527484,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.683471138605126,0.686334519619568,0.169978429993855,0,0,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,2.52808896502543,0.202725215290164,0,0.389762468933385,0.179026695667481,1.19208812868759,0.841368146639782,1.03382669022204,0.504832249740738,0.990688486514998,1.00826185136841,0.877120926657772,0.769694733122636,1.98690733708667,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr2:31937072..31937082,+ | |short_description=p@chr2:31937072..31937082,+ | ||
}} | }} |
Latest revision as of 00:59, 5 August 2015
Short description: | p@chr2:31937072..31937082, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:31937072..31937082, + |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.05e-14 | 2 |
leukocyte | 1.92e-14 | 17 |
nongranular leukocyte | 1.92e-14 | 17 |
T cell | 1.98e-10 | 11 |
pro-T cell | 1.98e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 9.85e-10 | 25 |
lymphoid lineage restricted progenitor cell | 1.40e-09 | 12 |
lymphocyte | 7.36e-09 | 13 |
common lymphoid progenitor | 7.36e-09 | 13 |
CD4-positive, alpha-beta T cell | 1.79e-08 | 8 |
regulatory T cell | 5.62e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.62e-08 | 1 |
monopoietic cell | 8.35e-08 | 4 |
myeloid leukocyte | 8.35e-08 | 4 |
phagocyte | 8.35e-08 | 4 |
monocyte | 8.35e-08 | 4 |
macrophage | 8.35e-08 | 4 |
tissue-resident macrophage | 8.35e-08 | 4 |
macrophage dendritic cell progenitor | 8.35e-08 | 4 |
monoblast | 8.35e-08 | 4 |
promonocyte | 8.35e-08 | 4 |
mature alpha-beta T cell | 1.38e-07 | 9 |
alpha-beta T cell | 1.38e-07 | 9 |
immature T cell | 1.38e-07 | 9 |
mature T cell | 1.38e-07 | 9 |
immature alpha-beta T cell | 1.38e-07 | 9 |
hematopoietic cell | 1.56e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.56e-07 | 32 |
hematopoietic stem cell | 1.56e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.56e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.41e-14 | 23 |
neck | 4.41e-14 | 23 |
respiratory system epithelium | 4.41e-14 | 23 |
hemolymphoid system gland | 4.41e-14 | 23 |
pharyngeal epithelium | 4.41e-14 | 23 |
thymic region | 4.41e-14 | 23 |
pharyngeal gland | 4.41e-14 | 23 |
entire pharyngeal arch endoderm | 4.41e-14 | 23 |
thymus primordium | 4.41e-14 | 23 |
early pharyngeal endoderm | 4.41e-14 | 23 |
pharynx | 1.78e-13 | 24 |
gland of gut | 1.78e-13 | 24 |
upper respiratory tract | 1.78e-13 | 24 |
chordate pharynx | 1.78e-13 | 24 |
pharyngeal arch system | 1.78e-13 | 24 |
pharyngeal region of foregut | 1.78e-13 | 24 |
hemolymphoid system | 2.78e-13 | 48 |
immune system | 2.78e-13 | 48 |
segment of respiratory tract | 6.32e-12 | 27 |
hematopoietic system | 1.77e-11 | 45 |
blood island | 1.77e-11 | 45 |
hemopoietic organ | 4.54e-11 | 29 |
immune organ | 4.54e-11 | 29 |
mixed endoderm/mesoderm-derived structure | 4.41e-09 | 35 |
craniocervical region | 8.15e-09 | 36 |
lymph node | 4.10e-08 | 1 |
axillary lymph node | 4.10e-08 | 1 |
peripheral lymph node | 4.10e-08 | 1 |
shoulder | 4.10e-08 | 1 |
respiratory tract | 1.13e-07 | 41 |
respiratory system | 1.78e-07 | 42 |
anterior region of body | 2.74e-07 | 43 |