FFCP PHASE1:Mm9::chr6:128864276..128864291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1438 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:128864276..128864291,+ | |||
|description=CAGE_peak_at_chr6:128864276..128864291,+ | |description=CAGE_peak_at_chr6:128864276..128864291,+ | ||
|id=chr6:128864276..128864291,+ | |id=chr6:128864276..128864291,+ | ||
|ontology_enrichment_celltype=CL:0002563!7.01e-11!9;CL:0002251!7.01e-11!9;CL:0000239!9.60e-07!6;CL:0000677!9.60e-07!6;CL:0000212!9.60e-07!6;CL:0000584!9.60e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.21e-17,9;CL:0002251,2.21e-17,9;CL:0000066,1.55e-11,25;CL:0002250,1.12e-10,3;CL:0000682,1.39e-10,3;CL:0002076,4.92e-10,15;CL:0000239,4.71e-09,6;CL:0000677,4.71e-09,6;CL:0000584,4.71e-09,6;CL:0000075,9.24e-08,7;CL:0000223,2.81e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.81e-20!59;UBERON:0000160!2.36e-19!43;UBERON:0000344!6.43e-19!15;UBERON:0001242!7.02e-16!13;UBERON:0000060!7.02e-16!13;UBERON:0001262!7.02e-16!13;UBERON:0004786!7.02e-16!13;UBERON:0001007!7.92e-12!128;UBERON:0001555!7.92e-12!128;UBERON:0007026!7.92e-12!128;UBERON:0004923!1.46e-11!24;UBERON:0004119!1.87e-11!130;UBERON:0000925!1.87e-11!130;UBERON:0006595!1.87e-11!130;UBERON:0003350!7.01e-11!9;UBERON:0004808!7.01e-11!9;UBERON:0001277!7.01e-11!9;UBERON:0004921!2.64e-10!126;UBERON:0004185!2.64e-10!126;UBERON:0000485!1.56e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.97e-44,31;UBERON:0000344,3.08e-34,15;UBERON:0005409,1.57e-30,47;UBERON:0001242,7.33e-28,13;UBERON:0001262,7.33e-28,13;UBERON:0004786,7.33e-28,13;UBERON:0004923,2.13e-20,24;UBERON:0003350,2.21e-17,9;UBERON:0004808,2.21e-17,9;UBERON:0001277,2.21e-17,9;UBERON:0000485,4.82e-14,11;UBERON:0002108,2.34e-12,4;UBERON:0001007,3.11e-12,116;UBERON:0001555,3.11e-12,116;UBERON:0007026,3.11e-12,116;UBERON:0004119,6.07e-12,118;UBERON:0000925,6.07e-12,118;UBERON:0006595,6.07e-12,118;UBERON:0004921,6.51e-10,114;UBERON:0000331,1.27e-09,3;UBERON:0002116,1.27e-09,3;UBERON:0001204,1.27e-09,3;UBERON:0001168,1.27e-09,3;UBERON:0001962,4.37e-08,2;UBERON:0001961,4.37e-08,2;UBERON:0001744,4.37e-08,2;UBERON:0001155,3.22e-07,2;UBERON:0000059,3.22e-07,2 | |||
|phase1_expression=0,11.8651638597383,13.1949779422965,0,0.500895729946347,78.9032577985882,64.4770888043651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,112.474673223765,94.5166237996741,18.9496548157957,27.1380057580217,54.9451643349017,2.09025761402011,1.51218077855958,60.0889683875876,0,0,0,43.0388913429399,44.8833542467929,36.1379760584393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,15.5828803677241,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,5.28901133327089,0,0,0.128867461322093,0,0.667134131534611,0.190225626112559,5.21981967698963,0,2.5133520880027,3.18330355265841,4.48417400373976,4.49409704327111,12.3198688428576,13.1433240347882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,6.12109756922687,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0.134864346384821,0.247960367176008,0.26175594198403,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.436039249896986,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,11.8651638597383,13.1949779422965,0,0.500895729946347,78.9032577985882,64.4770888043651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,112.474673223765,94.5166237996741,18.9496548157957,27.1380057580217,54.9451643349017,2.09025761402011,1.51218077855958,60.0889683875876,0,0,0,43.0388913429399,44.8833542467929,36.1379760584393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,15.5828803677241,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30418782983798,5.28901133327089,0,0,0.128867461322093,0,0.667134131534611,0.190225626112559,5.21981967698963,0,2.5133520880027,3.18330355265841,4.48417400373976,4.49409704327111,12.3198688428576,13.1433240347882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,6.12109756922687,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.216010681643603,0,0.436725127492355,0.134864346384821,0.247960367176008,0.26175594198403,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.436039249896986,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr6:128864276..128864291,+ | |short_description=p@chr6:128864276..128864291,+ | ||
}} | }} |
Latest revision as of 05:49, 5 August 2015
Short description: | p@chr6:128864276..128864291, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:128864276..128864291, + |
Coexpression cluster: | MCL_coexpression_mm9:1438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.21e-17 | 9 |
epithelial cell of alimentary canal | 2.21e-17 | 9 |
epithelial cell | 1.55e-11 | 25 |
intestinal crypt stem cell | 1.12e-10 | 3 |
M cell of gut | 1.39e-10 | 3 |
endo-epithelial cell | 4.92e-10 | 15 |
brush border epithelial cell | 4.71e-09 | 6 |
gut absorptive cell | 4.71e-09 | 6 |
enterocyte | 4.71e-09 | 6 |
columnar/cuboidal epithelial cell | 9.24e-08 | 7 |
endodermal cell | 2.81e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.97e-44 | 31 |
mucosa | 3.08e-34 | 15 |
gastrointestinal system | 1.57e-30 | 47 |
intestinal mucosa | 7.33e-28 | 13 |
wall of intestine | 7.33e-28 | 13 |
gastrointestinal system mucosa | 7.33e-28 | 13 |
organ component layer | 2.13e-20 | 24 |
epithelium of mucosa | 2.21e-17 | 9 |
gastrointestinal system epithelium | 2.21e-17 | 9 |
intestinal epithelium | 2.21e-17 | 9 |
simple columnar epithelium | 4.82e-14 | 11 |
small intestine | 2.34e-12 | 4 |
digestive system | 3.11e-12 | 116 |
digestive tract | 3.11e-12 | 116 |
primitive gut | 3.11e-12 | 116 |
endoderm-derived structure | 6.07e-12 | 118 |
endoderm | 6.07e-12 | 118 |
presumptive endoderm | 6.07e-12 | 118 |
subdivision of digestive tract | 6.51e-10 | 114 |
ileal mucosa | 1.27e-09 | 3 |
ileum | 1.27e-09 | 3 |
mucosa of small intestine | 1.27e-09 | 3 |
wall of small intestine | 1.27e-09 | 3 |
gut-associated lymphoid tissue | 4.37e-08 | 2 |
mucosa-associated lymphoid tissue | 4.37e-08 | 2 |
lymphoid tissue | 4.37e-08 | 2 |
colon | 3.22e-07 | 2 |
large intestine | 3.22e-07 | 2 |