FFCP PHASE1:Mm9::chr1:187094865..187094885,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:187094865..187094885,+|id=chr1:187094865..187094885,+|ontology_enrichment_celltype=CL:0002563!4.74e-19!9;CL:0002251!4.74e-19!9;CL:0000239!1.89e-13!6;CL:0000677!1.89e-13!6;CL:0000212!1.89e-13!6;CL:0000584!1.89e-13!6;CL:0000075!2.07e-11!7;CL:0002076!1.09e-10!15;CL:0000066!1.10e-10!25;CL:0000473!7.97e-08!3;CL:0000627!7.97e-08!3;CL:0000682!7.97e-08!3;CL:0000223!1.44e-07!20;CL:0002250!3.57e-07!3|ontology_enrichment_celltype_v019_2=CL:0002563,3.01e-23,9;CL:0002251,3.01e-23,9;CL:0000066,7.85e-15,25;CL:0000239,1.45e-14,6;CL:0000677,1.45e-14,6;CL:0000584,1.45e-14,6;CL:0002076,1.68e-13,15;CL:0000075,1.87e-12,7;CL:0000682,2.19e-11,3;CL:0002250,2.28e-10,3;CL:0000223,7.72e-10,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.95e-34!43;UBERON:0000344!7.79e-32!15;UBERON:0001242!1.53e-27!13;UBERON:0000060!1.53e-27!13;UBERON:0001262!1.53e-27!13;UBERON:0004786!1.53e-27!13;UBERON:0005409!4.99e-25!59;UBERON:0003350!4.74e-19!9;UBERON:0004808!4.74e-19!9;UBERON:0001277!4.74e-19!9;UBERON:0004923!1.93e-18!24;UBERON:0000485!3.01e-15!11;UBERON:0001007!1.34e-09!128;UBERON:0001555!1.34e-09!128;UBERON:0007026!1.34e-09!128;UBERON:0004119!2.44e-09!130;UBERON:0000925!2.44e-09!130;UBERON:0006595!2.44e-09!130;UBERON:0004921!5.21e-08!126;UBERON:0004185!5.21e-08!126;UBERON:0000331!1.14e-07!3;UBERON:0002116!1.14e-07!3;UBERON:0001204!1.14e-07!3;UBERON:0001168!1.14e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.36e-43,15;UBERON:0000160,3.43e-41,31;UBERON:0001242,2.13e-36,13;UBERON:0001262,2.13e-36,13;UBERON:0004786,2.13e-36,13;UBERON:0004923,6.20e-26,24;UBERON:0005409,6.46e-26,47;UBERON:0003350,3.01e-23,9;UBERON:0004808,3.01e-23,9;UBERON:0001277,3.01e-23,9;UBERON:0000485,8.06e-19,11;UBERON:0002108,3.42e-14,4;UBERON:0000331,3.83e-11,3;UBERON:0002116,3.83e-11,3;UBERON:0001204,3.83e-11,3;UBERON:0001168,3.83e-11,3;UBERON:0001007,1.37e-10,116;UBERON:0001555,1.37e-10,116;UBERON:0007026,1.37e-10,116;UBERON:0004119,2.44e-10,118;UBERON:0000925,2.44e-10,118;UBERON:0006595,2.44e-10,118;UBERON:0004921,1.92e-08,114;UBERON:0001962,3.69e-08,2;UBERON:0001961,3.69e-08,2;UBERON:0001744,3.69e-08,2|phase1_expression=0,3.14077866875425,4.54999239389536,9.67885476181856,6.01074875935617,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,4.12936705920906,5.7423196411502,4.73838195774982,3.23206849028834,3.42042155021473,7.81293402255785,2.21730510655305,0,0,0,2.59966457776147,2.49351968037739,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,6.08236303326152,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0.570676878337677,2.37264530772256,1.64698954724011,0.754005626400808,0.795825888164603,0.38992817423824,1.79763881730844,4.97117514711797,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr1:187094865..187094885,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:187094865..187094885,+ | |||
|description=CAGE_peak_at_chr1:187094865..187094885,+ | |||
|id=chr1:187094865..187094885,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.74e-19!9;CL:0002251!4.74e-19!9;CL:0000239!1.89e-13!6;CL:0000677!1.89e-13!6;CL:0000212!1.89e-13!6;CL:0000584!1.89e-13!6;CL:0000075!2.07e-11!7;CL:0002076!1.09e-10!15;CL:0000066!1.10e-10!25;CL:0000473!7.97e-08!3;CL:0000627!7.97e-08!3;CL:0000682!7.97e-08!3;CL:0000223!1.44e-07!20;CL:0002250!3.57e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.01e-23,9;CL:0002251,3.01e-23,9;CL:0000066,7.85e-15,25;CL:0000239,1.45e-14,6;CL:0000677,1.45e-14,6;CL:0000584,1.45e-14,6;CL:0002076,1.68e-13,15;CL:0000075,1.87e-12,7;CL:0000682,2.19e-11,3;CL:0002250,2.28e-10,3;CL:0000223,7.72e-10,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.95e-34!43;UBERON:0000344!7.79e-32!15;UBERON:0001242!1.53e-27!13;UBERON:0000060!1.53e-27!13;UBERON:0001262!1.53e-27!13;UBERON:0004786!1.53e-27!13;UBERON:0005409!4.99e-25!59;UBERON:0003350!4.74e-19!9;UBERON:0004808!4.74e-19!9;UBERON:0001277!4.74e-19!9;UBERON:0004923!1.93e-18!24;UBERON:0000485!3.01e-15!11;UBERON:0001007!1.34e-09!128;UBERON:0001555!1.34e-09!128;UBERON:0007026!1.34e-09!128;UBERON:0004119!2.44e-09!130;UBERON:0000925!2.44e-09!130;UBERON:0006595!2.44e-09!130;UBERON:0004921!5.21e-08!126;UBERON:0004185!5.21e-08!126;UBERON:0000331!1.14e-07!3;UBERON:0002116!1.14e-07!3;UBERON:0001204!1.14e-07!3;UBERON:0001168!1.14e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.36e-43,15;UBERON:0000160,3.43e-41,31;UBERON:0001242,2.13e-36,13;UBERON:0001262,2.13e-36,13;UBERON:0004786,2.13e-36,13;UBERON:0004923,6.20e-26,24;UBERON:0005409,6.46e-26,47;UBERON:0003350,3.01e-23,9;UBERON:0004808,3.01e-23,9;UBERON:0001277,3.01e-23,9;UBERON:0000485,8.06e-19,11;UBERON:0002108,3.42e-14,4;UBERON:0000331,3.83e-11,3;UBERON:0002116,3.83e-11,3;UBERON:0001204,3.83e-11,3;UBERON:0001168,3.83e-11,3;UBERON:0001007,1.37e-10,116;UBERON:0001555,1.37e-10,116;UBERON:0007026,1.37e-10,116;UBERON:0004119,2.44e-10,118;UBERON:0000925,2.44e-10,118;UBERON:0006595,2.44e-10,118;UBERON:0004921,1.92e-08,114;UBERON:0001962,3.69e-08,2;UBERON:0001961,3.69e-08,2;UBERON:0001744,3.69e-08,2 | |||
|phase1_expression=0,3.14077866875425,4.54999239389536,9.67885476181856,6.01074875935617,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,4.12936705920906,5.7423196411502,4.73838195774982,3.23206849028834,3.42042155021473,7.81293402255785,2.21730510655305,0,0,0,2.59966457776147,2.49351968037739,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,6.08236303326152,0,0,0.38660238396628,0.605050573870028,0.22237804384487,0.570676878337677,2.37264530772256,1.64698954724011,0.754005626400808,0.795825888164603,0.38992817423824,1.79763881730844,4.97117514711797,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:187094865..187094885,+ | |||
}} |
Latest revision as of 10:58, 5 August 2015
Short description: | p@chr1:187094865..187094885, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:187094865..187094885, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.01e-23 | 9 |
epithelial cell of alimentary canal | 3.01e-23 | 9 |
epithelial cell | 7.85e-15 | 25 |
brush border epithelial cell | 1.45e-14 | 6 |
gut absorptive cell | 1.45e-14 | 6 |
enterocyte | 1.45e-14 | 6 |
endo-epithelial cell | 1.68e-13 | 15 |
columnar/cuboidal epithelial cell | 1.87e-12 | 7 |
M cell of gut | 2.19e-11 | 3 |
intestinal crypt stem cell | 2.28e-10 | 3 |
endodermal cell | 7.72e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.36e-43 | 15 |
intestine | 3.43e-41 | 31 |
intestinal mucosa | 2.13e-36 | 13 |
wall of intestine | 2.13e-36 | 13 |
gastrointestinal system mucosa | 2.13e-36 | 13 |
organ component layer | 6.20e-26 | 24 |
gastrointestinal system | 6.46e-26 | 47 |
epithelium of mucosa | 3.01e-23 | 9 |
gastrointestinal system epithelium | 3.01e-23 | 9 |
intestinal epithelium | 3.01e-23 | 9 |
simple columnar epithelium | 8.06e-19 | 11 |
small intestine | 3.42e-14 | 4 |
ileal mucosa | 3.83e-11 | 3 |
ileum | 3.83e-11 | 3 |
mucosa of small intestine | 3.83e-11 | 3 |
wall of small intestine | 3.83e-11 | 3 |
digestive system | 1.37e-10 | 116 |
digestive tract | 1.37e-10 | 116 |
primitive gut | 1.37e-10 | 116 |
endoderm-derived structure | 2.44e-10 | 118 |
endoderm | 2.44e-10 | 118 |
presumptive endoderm | 2.44e-10 | 118 |
subdivision of digestive tract | 1.92e-08 | 114 |
gut-associated lymphoid tissue | 3.69e-08 | 2 |
mucosa-associated lymphoid tissue | 3.69e-08 | 2 |
lymphoid tissue | 3.69e-08 | 2 |