FFCP PHASE1:Mm9::chr5:104865387..104865406,+: Difference between revisions
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{{FFCP|EntrezGene=20750|HGNC=|MCL_coexpression_id=1401|UniProt=P10923,Q547B5|association_with_transcript=176bp_to_ENSMUST00000112747,NM_001204233,uc008ykk.2_5end|description=CAGE_peak_2_at_Spp1_5end|id=chr5:104865387..104865406,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002194,2.11e-13,4;CL:0000766,2.11e-13,4;CL:0000234,2.11e-13,4;CL:0000576,2.11e-13,4;CL:0000235,2.11e-13,4;CL:0000864,2.11e-13,4;CL:0002009,2.11e-13,4;CL:0000040,2.11e-13,4;CL:0000559,2.11e-13,4;CL:0002092,6.29e-10,3;CL:0002540,6.29e-10,3;CL:0000068,2.05e-09,3;CL:0002202,2.05e-09,3;CL:0000069,2.05e-09,3;CL:0002632,2.05e-09,3;CL:0002368,2.05e-09,3;CL:0000307,2.05e-09,3;CL:0000377,2.05e-09,3;CL:0002476,6.39e-08,2;CL:0000473,1.13e-07,7;CL:0000557,1.13e-07,7;CL:0000878,3.99e-07,2;CL:0000129,3.99e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.70e-10,22;UBERON:0004765,2.70e-10,22;UBERON:0001434,2.70e-10,22;UBERON:0003126,2.05e-09,3;UBERON:0001005,2.05e-09,3;UBERON:0007196,2.05e-09,3;UBERON:0001558,2.05e-09,3;UBERON:0002371,5.69e-09,16;UBERON:0002204,4.49e-08,32;UBERON:0001911,3.46e-07,2;UBERON:0000076,3.46e-07,2;UBERON:0005333,3.46e-07,2;UBERON:0008425,3.46e-07,2;UBERON:0005311,3.46e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,1.03134418455488,0,0,0,0,0,1.3498495759221,7.9109309005358,1.4209602298922,2.09720077362883,1.53687322128622,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.558365998002762,0,0,0,0,0,0.075726193333184,1.13357340160178,21.1601076752225,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,5.79463096765396,7.53379413348319,3.88673531961374,0.14084341977668,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,1.61766849947409,0.441683036920787,3.39412677194655,0,0,0.41889341362691,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.379419222745544,1.62371162777562,1.41298855057237,2.83813477020141,0,0,0,0,0,0,0,0.287696137450811,0,0,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1582567878545,4.35124547054968,19.6705709207614,1.10374698521893,0.160550589987792,0.117211686592203,0.819674726883377,0.757412781613119,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0.614870295887855,0.516856586336442,0.727067458955011,0,0.316036757935816,0,2.06271086496374,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.785267825952089,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0,0.760437899670719,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,1.28922632428979,1.72159498861959,1.98532277207564,0.463735671240843|short_description=p2@Spp1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20750 | |||
|HGNC= | |||
|MCL_coexpression_id=1401 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P10923,uniprot:Q547B5 | |||
|association_with_transcript=176bp_to_ENSMUST00000112747,NM_001204233,uc008ykk.2_5end | |||
|cluster_id=chr5:104865387..104865406,+ | |||
|description=CAGE_peak_2_at_Spp1_5end | |||
|id=chr5:104865387..104865406,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.11e-13,4;CL:0000766,2.11e-13,4;CL:0000234,2.11e-13,4;CL:0000576,2.11e-13,4;CL:0000235,2.11e-13,4;CL:0000864,2.11e-13,4;CL:0002009,2.11e-13,4;CL:0000040,2.11e-13,4;CL:0000559,2.11e-13,4;CL:0002092,6.29e-10,3;CL:0002540,6.29e-10,3;CL:0000068,2.05e-09,3;CL:0002202,2.05e-09,3;CL:0000069,2.05e-09,3;CL:0002632,2.05e-09,3;CL:0002368,2.05e-09,3;CL:0000307,2.05e-09,3;CL:0000377,2.05e-09,3;CL:0002476,6.39e-08,2;CL:0000473,1.13e-07,7;CL:0000557,1.13e-07,7;CL:0000878,3.99e-07,2;CL:0000129,3.99e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.70e-10,22;UBERON:0004765,2.70e-10,22;UBERON:0001434,2.70e-10,22;UBERON:0003126,2.05e-09,3;UBERON:0001005,2.05e-09,3;UBERON:0007196,2.05e-09,3;UBERON:0001558,2.05e-09,3;UBERON:0002371,5.69e-09,16;UBERON:0002204,4.49e-08,32;UBERON:0001911,3.46e-07,2;UBERON:0000076,3.46e-07,2;UBERON:0005333,3.46e-07,2;UBERON:0008425,3.46e-07,2;UBERON:0005311,3.46e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,1.03134418455488,0,0,0,0,0,1.3498495759221,7.9109309005358,1.4209602298922,2.09720077362883,1.53687322128622,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.558365998002762,0,0,0,0,0,0.075726193333184,1.13357340160178,21.1601076752225,0.860423876981386,0.679971333707751,0,0,0,0.280888840263504,5.79463096765396,7.53379413348319,3.88673531961374,0.14084341977668,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,1.61766849947409,0.441683036920787,3.39412677194655,0,0,0.41889341362691,0,0.11981512450592,0,0,0.149790639404823,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.379419222745544,1.62371162777562,1.41298855057237,2.83813477020141,0,0,0,0,0,0,0,0.287696137450811,0,0,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.1582567878545,4.35124547054968,19.6705709207614,1.10374698521893,0.160550589987792,0.117211686592203,0.819674726883377,0.757412781613119,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0.614870295887855,0.516856586336442,0.727067458955011,0,0.316036757935816,0,2.06271086496374,0,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0.785267825952089,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0.551530525350042,0.44449345560323,0.206035057238894,0.320919209591815,0,0.760437899670719,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0,1.28922632428979,1.72159498861959,1.98532277207564,0.463735671240843 | |||
|short_description=p2@Spp1 | |||
}} |
Revision as of 22:26, 5 August 2015
Short description: | p2@Spp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1401 |
Association with transcript: | 176bp_to_ENSMUST00000112747, NM_001204233, uc008ykk.2_5end |
EntrezGene: | 20750 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.11e-13 | 4 |
myeloid leukocyte | 2.11e-13 | 4 |
phagocyte | 2.11e-13 | 4 |
monocyte | 2.11e-13 | 4 |
macrophage | 2.11e-13 | 4 |
tissue-resident macrophage | 2.11e-13 | 4 |
macrophage dendritic cell progenitor | 2.11e-13 | 4 |
monoblast | 2.11e-13 | 4 |
promonocyte | 2.11e-13 | 4 |
bone marrow cell | 6.29e-10 | 3 |
mesenchymal stem cell of the bone marrow | 6.29e-10 | 3 |
duct epithelial cell | 2.05e-09 | 3 |
epithelial cell of tracheobronchial tree | 2.05e-09 | 3 |
branched duct epithelial cell | 2.05e-09 | 3 |
epithelial cell of lower respiratory tract | 2.05e-09 | 3 |
respiratory epithelial cell | 2.05e-09 | 3 |
tracheal epithelial cell | 2.05e-09 | 3 |
tracheoblast | 2.05e-09 | 3 |
bone marrow macrophage | 6.39e-08 | 2 |
defensive cell | 1.13e-07 | 7 |
granulocyte monocyte progenitor cell | 1.13e-07 | 7 |
central nervous system macrophage | 3.99e-07 | 2 |
microglial cell | 3.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.70e-10 | 22 |
skeletal element | 2.70e-10 | 22 |
skeletal system | 2.70e-10 | 22 |
trachea | 2.05e-09 | 3 |
respiratory airway | 2.05e-09 | 3 |
tracheobronchial tree | 2.05e-09 | 3 |
lower respiratory tract | 2.05e-09 | 3 |
bone marrow | 5.69e-09 | 16 |
musculoskeletal system | 4.49e-08 | 32 |
mammary gland | 3.46e-07 | 2 |
external ectoderm | 3.46e-07 | 2 |
mammary bud | 3.46e-07 | 2 |
mammary ridge | 3.46e-07 | 2 |
mammary placode | 3.46e-07 | 2 |