FFCP PHASE1:Hg19::chr10:102505655..102505689,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:102505655..102505689,+ to FFCP PHASE1:Hg19::chr10:102505655..102505689,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5076 | |EntrezGene=5076 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8616 | |HGNC=8616 | ||
|TSSclassifier=strong | |||
|UniProt=Q02962 | |UniProt=Q02962 | ||
|association_with_transcript=187bp_to_ENST00000355243,ENST00000361791,ENST00000370294,ENST00000370296,ENST00000428433,NM_000278,NM_003987,NM_003988,NM_003989,NM_003990,uc001krk.3,uc001krl.3,uc001krm.3,uc001krn.3,uc001kro.3,uc010qps.1_5end | |||
|cluster_id=chr10:102505655..102505689,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_10_at_PAX2_5end | |||
|id=chr10:102505655..102505689,+ | |||
|ontology_enrichment_celltype=CL:0002681!4.93e-13!13;CL:0002584!4.93e-13!13;CL:1000449!1.50e-10!16;CL:0000650!2.42e-10!3;CL:1000618!2.42e-10!3;CL:1001318!2.42e-10!3;CL:0002173!2.42e-10!3;CL:1000500!2.42e-10!3;CL:0000239!4.79e-10!3;CL:1000615!4.79e-10!3;CL:0002306!4.79e-10!3;CL:1000612!2.01e-09!7;CL:1000746!2.01e-09!7;CL:1000507!2.08e-09!12;CL:1000494!2.08e-09!12;CL:1000497!2.37e-09!18;CL:0002518!2.37e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000650;4.52e-50;2!CL:1000500;4.52e-50;2!CL:1000618;4.52e-50;2!CL:1001318;4.52e-50;2!CL:0002173;4.52e-50;2!CL:0000669;7.14e-26;4!CL:1000746;1.91e-15;7!CL:1000612;1.91e-15;7!CL:1000507;3.02e-11;10!CL:1000494;3.02e-11;10!CL:0002681;1.33e-09;12!CL:0002584;1.33e-09;12!CL:1000449;5.93e-08;15!CL:1000497;3.58e-07;17!CL:0002518;3.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,4.52e-50,2;CL:1000500,4.52e-50,2;CL:1000618,4.52e-50,2;CL:1001318,4.52e-50,2;CL:0002173,4.52e-50,2;CL:0000669,7.14e-26,4;CL:1000746,1.91e-15,7;CL:1000612,1.91e-15,7;CL:1000507,3.02e-11,10;CL:1000494,3.02e-11,10;CL:0002681,1.33e-09,12;CL:0002584,1.33e-09,12;CL:1000449,5.93e-08,15;CL:1000497,3.58e-07,17;CL:0002518,3.58e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.06e-28!32;UBERON:0002113!1.09e-23!27;UBERON:0003918!1.09e-23!27;UBERON:0005095!1.09e-23!27;UBERON:0007687!1.09e-23!27;UBERON:0006947!1.70e-21!3;UBERON:0004054!1.70e-21!3;UBERON:0000080!6.10e-18!18;UBERON:0002120!6.10e-18!18;UBERON:0004875!6.10e-18!18;UBERON:0005721!6.10e-18!18;UBERON:0005754!6.10e-18!18;UBERON:0007297!6.10e-18!18;UBERON:0006554!9.94e-17!44;UBERON:0001008!2.59e-16!45;UBERON:0005904!2.87e-16!4;UBERON:0004876!4.60e-16!20;UBERON:0000058!8.39e-16!26;UBERON:0003887!2.94e-15!21;UBERON:0001851!8.95e-15!16;UBERON:0006555!4.08e-14!17;UBERON:0005103!4.08e-14!17;UBERON:0000083!4.08e-14!17;UBERON:0009201!4.08e-14!17;UBERON:0004819!4.08e-14!17;UBERON:0006553!4.08e-14!17;UBERON:0003074!4.08e-14!17;UBERON:0003060!4.08e-14!17;UBERON:0003064!2.16e-13!37;UBERON:0001225!4.93e-13!13;UBERON:0008987!4.93e-13!13;UBERON:0005172!5.24e-13!55;UBERON:0005173!5.24e-13!55;UBERON:0003103!5.71e-12!69;UBERON:0002417!1.56e-11!61;UBERON:0000916!1.56e-11!61;UBERON:0004211!1.50e-10!16;UBERON:0001285!1.50e-10!16;UBERON:0007684!1.50e-10!16;UBERON:0003220!1.50e-10!16;UBERON:0004208!1.50e-10!16;UBERON:0003567!2.42e-10!3;UBERON:0003838!2.42e-10!3;UBERON:0005169!2.42e-10!3;UBERON:0002321!2.42e-10!3;UBERON:0005215!2.42e-10!3;UBERON:0002303!2.42e-10!3;UBERON:0002319!2.42e-10!3;UBERON:0003135!2.50e-10!11;UBERON:0006853!4.79e-10!3;UBERON:0007685!4.79e-10!3;UBERON:0004134!4.79e-10!3;UBERON:0000353!6.46e-10!17;UBERON:0002240!7.85e-10!3;UBERON:0000074!2.01e-09!7;UBERON:0001229!2.01e-09!7;UBERON:0001230!2.01e-09!7;UBERON:0005749!2.01e-09!7;UBERON:0004199!2.01e-09!7;UBERON:0004209!2.01e-09!7;UBERON:0004198!2.01e-09!7;UBERON:0009773!2.08e-09!12;UBERON:0001231!2.08e-09!12;UBERON:0004810!2.08e-09!12;UBERON:0001301!1.65e-08!1;UBERON:0000998!3.11e-08!1;UBERON:0006868!3.11e-08!1;UBERON:0005177!3.18e-08!107;UBERON:0001000!3.34e-08!1;UBERON:0005352!3.34e-08!1;UBERON:0003101!1.37e-07!22;UBERON:0000079!1.37e-07!22;UBERON:0003886!2.10e-07!63;UBERON:0001737!3.35e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;9.37e-99;1!UBERON:0003567;4.52e-50;2!UBERON:0003838;4.52e-50;2!UBERON:0003586;4.52e-50;2!UBERON:0005169;4.52e-50;2!UBERON:0002321;4.52e-50;2!UBERON:0005215;4.52e-50;2!UBERON:0002303;4.52e-50;2!UBERON:0002319;4.52e-50;2!UBERON:0006947;4.27e-34;3!UBERON:0004054;4.27e-34;3!UBERON:0005904;5.56e-26;4!UBERON:0003891;7.14e-26;4!UBERON:0000074;1.91e-15;7!UBERON:0001229;1.91e-15;7!UBERON:0000058;2.73e-11;10!UBERON:0004211;3.02e-11;10!UBERON:0009773;3.02e-11;10!UBERON:0001231;3.02e-11;10!UBERON:0004810;3.02e-11;10!UBERON:0003135;2.16e-10;11!UBERON:0001225;1.33e-09;12!UBERON:0008987;1.33e-09;12!UBERON:0001851;5.93e-08;15!UBERON:0006555;5.93e-08;15!UBERON:0000353;5.93e-08;15!UBERON:0004819;5.93e-08;15!UBERON:0001285;5.93e-08;15!UBERON:0007684;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.37e-99,1;UBERON:0005103,3.99e-50,8;UBERON:0000083,3.99e-50,8;UBERON:0009201,3.99e-50,8;UBERON:0006553,3.99e-50,8;UBERON:0003074,3.99e-50,8;UBERON:0003060,3.99e-50,8;UBERON:0003567,4.52e-50,2;UBERON:0003838,4.52e-50,2;UBERON:0003586,4.52e-50,2;UBERON:0005169,4.52e-50,2;UBERON:0002321,4.52e-50,2;UBERON:0005215,4.52e-50,2;UBERON:0002303,4.52e-50,2;UBERON:0002319,4.52e-50,2;UBERON:0000080,9.75e-45,9;UBERON:0002120,9.75e-45,9;UBERON:0004875,9.75e-45,9;UBERON:0005721,9.75e-45,9;UBERON:0005754,9.75e-45,9;UBERON:0007297,9.75e-45,9;UBERON:0004876,6.80e-37,11;UBERON:0006947,4.27e-34,3;UBERON:0004054,4.27e-34,3;UBERON:0003887,5.98e-34,12;UBERON:0005904,5.56e-26,4;UBERON:0003891,7.14e-26,4;UBERON:0006555,7.63e-26,16;UBERON:0004819,7.63e-26,16;UBERON:0000058,5.37e-22,19;UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0010532,1.91e-15,7;UBERON:0000074,1.91e-15,7;UBERON:0001229,1.91e-15,7;UBERON:0001230,1.91e-15,7;UBERON:0003220,1.91e-15,7;UBERON:0005749,1.91e-15,7;UBERON:0004199,1.91e-15,7;UBERON:0004209,1.91e-15,7;UBERON:0004198,1.91e-15,7;UBERON:0003064,2.22e-15,28;UBERON:0000489,5.04e-14,31;UBERON:0004810,3.02e-11,10;UBERON:0003135,2.16e-10,11;UBERON:0006554,1.08e-09,47;UBERON:0001225,1.33e-09,12;UBERON:0008987,1.33e-09,12;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0003886,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0001851,5.93e-08,15;UBERON:0004211,5.93e-08,15;UBERON:0009773,5.93e-08,15;UBERON:0000353,5.93e-08,15;UBERON:0001231,5.93e-08,15;UBERON:0001285,5.93e-08,15;UBERON:0007684,5.93e-08,15;UBERON:0004208,5.93e-08,15;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0002553,9.44e-08,61;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p10@PAX2 | |||
}} | }} |
Latest revision as of 22:12, 15 September 2015
Short description: | p10@PAX2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PAX2_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 187bp_to_ENST00000355243, ENST00000361791, ENST00000370294, ENST00000370296, ENST00000428433, NM_000278, NM_003987, NM_003988, NM_003989, NM_003990, uc001krk.3, uc001krl.3, uc001krm.3, uc001krn.3, uc001kro.3, uc010qps.1_5end |
EntrezGene: | PAX2 |
HGNC: | 8616 |
UniProt: | Q02962 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 4.52e-50 | 2 |
kidney interstitial cell | 4.52e-50 | 2 |
juxtaglomerular complex cell | 4.52e-50 | 2 |
renal interstitial pericyte | 4.52e-50 | 2 |
extraglomerular mesangial cell | 4.52e-50 | 2 |
pericyte cell | 7.14e-26 | 4 |
glomerular cell | 1.91e-15 | 7 |
kidney corpuscule cell | 1.91e-15 | 7 |
kidney tubule cell | 3.02e-11 | 10 |
nephron tubule epithelial cell | 3.02e-11 | 10 |
kidney cortical cell | 1.33e-09 | 12 |
renal cortical epithelial cell | 1.33e-09 | 12 |
epithelial cell of nephron | 5.93e-08 | 15 |
kidney cell | 3.58e-07 | 17 |
kidney epithelial cell | 3.58e-07 | 17 |