FFCP PHASE1:Hg19::chr14:73525229..73525260,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:73525229..73525260,+
|short_description=p1@RBM25
|description=CAGE_peak_1_at_RBM25_5end
|association_with_transcript=0bp_to_ENST00000525321,ENST0000052675...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58517 | |EntrezGene=58517 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23244 | |HGNC=23244 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQU5 | |UniProt=E9PQU5 | ||
|association_with_transcript=0bp_to_ENST00000525321,ENST00000526754,ENST00000527432,ENST00000531500,ENST00000532683_5end | |||
|cluster_id=chr14:73525229..73525260,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_RBM25_5end | |||
|id=chr14:73525229..73525260,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.11e-35!172;CL:0000566!1.11e-35!172;CL:0002032!7.94e-33!165;CL:0000837!7.94e-33!165;CL:0000988!6.98e-32!182;CL:0000738!2.73e-30!140;CL:0002031!6.26e-24!124;CL:0002087!1.51e-21!119;CL:0000763!6.63e-21!112;CL:0000049!6.63e-21!112;CL:0000766!1.38e-14!76;CL:0002057!2.06e-14!42;CL:0000557!8.24e-13!71;CL:0000860!1.10e-12!45;CL:0000839!3.24e-12!70;CL:0000838!4.27e-11!52;CL:0000542!5.49e-11!53;CL:0000051!5.49e-11!53;CL:0002009!1.92e-10!65;CL:0002194!1.17e-09!63;CL:0000576!1.17e-09!63;CL:0000040!1.17e-09!63;CL:0000559!1.17e-09!63;CL:0000791!3.31e-08!18;CL:0000789!3.31e-08!18;CL:0002420!3.31e-08!18;CL:0002419!3.31e-08!18;CL:0000790!3.31e-08!18;CL:0000084!8.75e-07!25;CL:0000827!8.75e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.33e-11;33!CL:0002057;9.33e-11;33!CL:0000576;4.04e-09;48!CL:0002087;2.19e-08;104!CL:0000791;3.20e-08;18!CL:0000789;3.20e-08;18!CL:0002419;3.20e-08;18!CL:0000766;1.35e-07;69!CL:0000738;6.63e-07;136!CL:0000084;8.69e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.66e-37,168;CL:0002032,2.88e-34,161;CL:0000837,2.88e-34,161;CL:0000988,5.99e-34,177;CL:0000738,7.72e-32,136;CL:0002031,2.34e-25,120;CL:0002087,6.56e-23,115;CL:0000763,2.67e-22,108;CL:0000049,2.67e-22,108;CL:0000766,5.16e-16,72;CL:0000860,2.06e-14,42;CL:0002057,2.06e-14,42;CL:0000557,3.62e-14,67;CL:0000839,1.55e-13,66;CL:0002009,1.13e-11,61;CL:0000838,4.27e-11,52;CL:0000542,5.49e-11,53;CL:0000051,5.49e-11,53;CL:0000473,6.97e-11,48;CL:0000234,6.97e-11,48;CL:0002194,7.69e-11,59;CL:0000576,7.69e-11,59;CL:0000040,7.69e-11,59;CL:0000559,7.69e-11,59;CL:0000791,3.31e-08,18;CL:0000789,3.31e-08,18;CL:0002420,3.31e-08,18;CL:0002419,3.31e-08,18;CL:0000790,3.31e-08,18;CL:0000084,8.75e-07,25;CL:0000827,8.75e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-10;42!CL:0000790;3.20e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.70e-15!102;UBERON:0003061!4.70e-15!102;UBERON:0007023!3.82e-14!115;UBERON:0002193!1.95e-12!112;UBERON:0001049!8.26e-10!57;UBERON:0005068!8.26e-10!57;UBERON:0006241!8.26e-10!57;UBERON:0007135!8.26e-10!57;UBERON:0002780!1.86e-09!41;UBERON:0001890!1.86e-09!41;UBERON:0006240!1.86e-09!41;UBERON:0002371!2.08e-09!80;UBERON:0001474!2.15e-09!86;UBERON:0003080!2.44e-09!42;UBERON:0001017!1.95e-08!82;UBERON:0002616!1.21e-07!59;UBERON:0005743!1.25e-07!86;UBERON:0000073!1.65e-07!94;UBERON:0001016!1.65e-07!94;UBERON:0001893!2.64e-07!34;UBERON:0000955!3.06e-07!69;UBERON:0006238!3.06e-07!69;UBERON:0002020!3.12e-07!34;UBERON:0003528!3.12e-07!34;UBERON:0002791!3.27e-07!33;UBERON:0004765!3.33e-07!101;UBERON:0001434!3.33e-07!101;UBERON:0001869!3.84e-07!32;UBERON:0000178!6.94e-07!15;UBERON:0000179!6.94e-07!15;UBERON:0000463!6.94e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.97e-07;41!UBERON:0001890;4.97e-07;41!UBERON:0000178;7.04e-07;15!UBERON:0000179;7.04e-07;15!UBERON:0000463;7.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.22e-16,98;UBERON:0003061,3.22e-16,98;UBERON:0007023,4.75e-14,114;UBERON:0002193,2.26e-13,108;UBERON:0002371,2.25e-10,76;UBERON:0001474,2.62e-10,82;UBERON:0001049,6.82e-10,56;UBERON:0005068,6.82e-10,56;UBERON:0006241,6.82e-10,56;UBERON:0007135,6.82e-10,56;UBERON:0002780,1.86e-09,41;UBERON:0001890,1.86e-09,41;UBERON:0003080,1.86e-09,41;UBERON:0006240,1.86e-09,41;UBERON:0000073,3.46e-09,53;UBERON:0002616,3.46e-09,53;UBERON:0002405,6.00e-09,93;UBERON:0001017,1.79e-08,81;UBERON:0001016,2.79e-08,89;UBERON:0004765,6.32e-08,90;UBERON:0001893,2.64e-07,34;UBERON:0000955,2.81e-07,68;UBERON:0006238,2.81e-07,68;UBERON:0003528,3.12e-07,34;UBERON:0002020,3.12e-07,34;UBERON:0001869,3.84e-07,32;UBERON:0002791,3.97e-07,32;UBERON:0001434,5.82e-07,100;UBERON:0000178,6.94e-07,15;UBERON:0000179,6.94e-07,15;UBERON:0000463,6.94e-07,15 | |||
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| ||
|short_description=p1@RBM25 | |||
}} | }} |
Latest revision as of 22:31, 15 September 2015
Short description: | p1@RBM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBM25_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000525321, ENST00000526754, ENST00000527432, ENST00000531500, ENST00000532683_5end |
EntrezGene: | RBM25 |
HGNC: | 23244 |
UniProt: | E9PQU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.22e-16 | 98 |
blood island | 3.22e-16 | 98 |
adult organism | 4.75e-14 | 114 |
hemolymphoid system | 2.26e-13 | 108 |
bone marrow | 2.25e-10 | 76 |
bone element | 2.62e-10 | 82 |
neural tube | 6.82e-10 | 56 |
neural rod | 6.82e-10 | 56 |
future spinal cord | 6.82e-10 | 56 |
neural keel | 6.82e-10 | 56 |
regional part of forebrain | 1.86e-09 | 41 |
forebrain | 1.86e-09 | 41 |
anterior neural tube | 1.86e-09 | 41 |
future forebrain | 1.86e-09 | 41 |
regional part of nervous system | 3.46e-09 | 53 |
regional part of brain | 3.46e-09 | 53 |
immune system | 6.00e-09 | 93 |
central nervous system | 1.79e-08 | 81 |
nervous system | 2.79e-08 | 89 |
skeletal element | 6.32e-08 | 90 |
telencephalon | 2.64e-07 | 34 |
brain | 2.81e-07 | 68 |
future brain | 2.81e-07 | 68 |
brain grey matter | 3.12e-07 | 34 |
gray matter | 3.12e-07 | 34 |
cerebral hemisphere | 3.84e-07 | 32 |
regional part of telencephalon | 3.97e-07 | 32 |
skeletal system | 5.82e-07 | 100 |
blood | 6.94e-07 | 15 |
haemolymphatic fluid | 6.94e-07 | 15 |
organism substance | 6.94e-07 | 15 |