FFCP PHASE1:Hg19::chr5:147162202..147162227,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9832 | |EntrezGene=9832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29067 | |HGNC=29067 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3A5,Q96AA8 | |UniProt=F5H3A5,Q96AA8 | ||
|association_with_transcript=24bp_to_ENST00000539401,NM_014790,uc003loq.1,uc003lor.1,uc011dbx.1_5end | |association_with_transcript=24bp_to_ENST00000539401,NM_014790,uc003loq.1,uc003lor.1,uc011dbx.1_5end | ||
|cluster_id=chr5:147162202..147162227,- | |||
|coexpression_cluster_id=C2809 | |||
|description=CAGE_peak_2_at_JAKMIP2_5end | |description=CAGE_peak_2_at_JAKMIP2_5end | ||
|id=chr5:147162202..147162227,- | |id=chr5:147162202..147162227,- | ||
|ontology_enrichment_celltype=CL:0002057!9.04e-11!42;CL:0002087!1.56e-09!119;CL:0000766!1.89e-09!76;CL:0000738!3.42e-09!140;CL:0000860!3.64e-09!45;CL:0000839!3.69e-09!70;CL:0002031!7.57e-09!124;CL:0000557!8.42e-09!71;CL:0002194!9.38e-09!63;CL:0000576!9.38e-09!63;CL:0000040!9.38e-09!63;CL:0000559!9.38e-09!63;CL:0002009!4.96e-08!65 | |ontology_enrichment_celltype=CL:0002057!9.04e-11!42;CL:0002087!1.56e-09!119;CL:0000766!1.89e-09!76;CL:0000738!3.42e-09!140;CL:0000860!3.64e-09!45;CL:0000839!3.69e-09!70;CL:0002031!7.57e-09!124;CL:0000557!8.42e-09!71;CL:0002194!9.38e-09!63;CL:0000576!9.38e-09!63;CL:0000040!9.38e-09!63;CL:0000559!9.38e-09!63;CL:0002009!4.96e-08!65 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.17e-14;39!CL:0000234;2.17e-14;39!CL:0000860;6.09e-12;33!CL:0002057;6.09e-12;33!CL:0000235;9.07e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.80e-14,48;CL:0000234,1.80e-14,48;CL:0002194,4.15e-10,59;CL:0000576,4.15e-10,59;CL:0000040,4.15e-10,59;CL:0000559,4.15e-10,59;CL:0000839,4.79e-10,66;CL:0000860,6.64e-10,42;CL:0002057,6.64e-10,42;CL:0000557,9.76e-10,67;CL:0002009,1.89e-09,61;CL:0002031,9.63e-09,120;CL:0002087,1.29e-08,115;CL:0000766,2.44e-08,72;CL:0000235,1.03e-07,6;CL:0000738,6.94e-07,136;CL:0000047,7.18e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.94e-11;82!CL:0002057;4.54e-08;42 | |||
|ontology_enrichment_disease=DOID:171!8.83e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.61e-10;10!DOID:169;7.53e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.20e-10,10;DOID:169,9.88e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.22e-38!94;UBERON:0001016!4.22e-38!94;UBERON:0005743!1.43e-36!86;UBERON:0001017!4.99e-36!82;UBERON:0001049!2.07e-33!57;UBERON:0005068!2.07e-33!57;UBERON:0006241!2.07e-33!57;UBERON:0007135!2.07e-33!57;UBERON:0002616!3.14e-30!59;UBERON:0000955!2.54e-29!69;UBERON:0006238!2.54e-29!69;UBERON:0002346!8.09e-29!90;UBERON:0002780!6.00e-27!41;UBERON:0001890!6.00e-27!41;UBERON:0006240!6.00e-27!41;UBERON:0003075!2.42e-26!86;UBERON:0007284!2.42e-26!86;UBERON:0003080!8.66e-26!42;UBERON:0003056!6.04e-23!61;UBERON:0002020!1.32e-22!34;UBERON:0003528!1.32e-22!34;UBERON:0001893!1.56e-22!34;UBERON:0002791!6.28e-22!33;UBERON:0001869!4.56e-21!32;UBERON:0007023!2.02e-19!115;UBERON:0000924!4.02e-17!173;UBERON:0006601!4.02e-17!173;UBERON:0000153!4.34e-17!129;UBERON:0007811!4.34e-17!129;UBERON:0000956!8.39e-17!25;UBERON:0000203!8.39e-17!25;UBERON:0004121!2.21e-15!169;UBERON:0000033!2.77e-15!123;UBERON:0002619!3.49e-15!22;UBERON:0001950!8.42e-14!20;UBERON:0002390!3.70e-12!102;UBERON:0003061!3.70e-12!102;UBERON:0002193!8.51e-10!112;UBERON:0003076!1.05e-08!15;UBERON:0003057!1.05e-08!15;UBERON:0002371!3.83e-08!80;UBERON:0001474!1.22e-07!86;UBERON:0004732!1.66e-07!13;UBERON:0002308!2.94e-07!9;UBERON:0000125!2.94e-07!9;UBERON:0002420!5.77e-07!9;UBERON:0007245!5.77e-07!9;UBERON:0010009!5.77e-07!9;UBERON:0010011!5.77e-07!9;UBERON:0000454!5.77e-07!9;UBERON:0004733!7.88e-07!12;UBERON:0002028!7.88e-07!12;UBERON:0007277!7.88e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!4.22e-38!94;UBERON:0001016!4.22e-38!94;UBERON:0005743!1.43e-36!86;UBERON:0001017!4.99e-36!82;UBERON:0001049!2.07e-33!57;UBERON:0005068!2.07e-33!57;UBERON:0006241!2.07e-33!57;UBERON:0007135!2.07e-33!57;UBERON:0002616!3.14e-30!59;UBERON:0000955!2.54e-29!69;UBERON:0006238!2.54e-29!69;UBERON:0002346!8.09e-29!90;UBERON:0002780!6.00e-27!41;UBERON:0001890!6.00e-27!41;UBERON:0006240!6.00e-27!41;UBERON:0003075!2.42e-26!86;UBERON:0007284!2.42e-26!86;UBERON:0003080!8.66e-26!42;UBERON:0003056!6.04e-23!61;UBERON:0002020!1.32e-22!34;UBERON:0003528!1.32e-22!34;UBERON:0001893!1.56e-22!34;UBERON:0002791!6.28e-22!33;UBERON:0001869!4.56e-21!32;UBERON:0007023!2.02e-19!115;UBERON:0000924!4.02e-17!173;UBERON:0006601!4.02e-17!173;UBERON:0000153!4.34e-17!129;UBERON:0007811!4.34e-17!129;UBERON:0000956!8.39e-17!25;UBERON:0000203!8.39e-17!25;UBERON:0004121!2.21e-15!169;UBERON:0000033!2.77e-15!123;UBERON:0002619!3.49e-15!22;UBERON:0001950!8.42e-14!20;UBERON:0002390!3.70e-12!102;UBERON:0003061!3.70e-12!102;UBERON:0002193!8.51e-10!112;UBERON:0003076!1.05e-08!15;UBERON:0003057!1.05e-08!15;UBERON:0002371!3.83e-08!80;UBERON:0001474!1.22e-07!86;UBERON:0004732!1.66e-07!13;UBERON:0002308!2.94e-07!9;UBERON:0000125!2.94e-07!9;UBERON:0002420!5.77e-07!9;UBERON:0007245!5.77e-07!9;UBERON:0010009!5.77e-07!9;UBERON:0010011!5.77e-07!9;UBERON:0000454!5.77e-07!9;UBERON:0004733!7.88e-07!12;UBERON:0002028!7.88e-07!12;UBERON:0007277!7.88e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.06e-26;34!UBERON:0002780;1.07e-26;41!UBERON:0001890;1.07e-26;41!UBERON:0003528;1.61e-26;34!UBERON:0002020;1.61e-26;34!UBERON:0002791;2.77e-26;32!UBERON:0001869;4.23e-26;32!UBERON:0000073;5.02e-26;53!UBERON:0002616;5.02e-26;53!UBERON:0000956;6.65e-23;25!UBERON:0000203;6.65e-23;25!UBERON:0002619;1.15e-20;22!UBERON:0001950;8.65e-19;20!UBERON:0000955;6.83e-18;68!UBERON:0001016;2.65e-17;83!UBERON:0001017;6.77e-17;75!UBERON:0000125;1.71e-09;9!UBERON:0002308;1.71e-09;9!UBERON:0004732;2.51e-09;13!UBERON:0002420;5.35e-09;9!UBERON:0007245;5.35e-09;9!UBERON:0010009;5.35e-09;9!UBERON:0010011;5.35e-09;9!UBERON:0000454;5.35e-09;9!UBERON:0004733;2.07e-08;12!UBERON:0002028;2.07e-08;12!UBERON:0001894;1.14e-07;7!UBERON:0009663;1.24e-07;7!UBERON:0000200;3.72e-07;6!UBERON:0002298;6.15e-07;6 | |||
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| ||
|short_description=p2@JAKMIP2 | |short_description=p2@JAKMIP2 | ||
}} | }} |
Latest revision as of 22:48, 15 September 2015
Short description: | p2@JAKMIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_JAKMIP2_5end |
Coexpression cluster: | C2809_cerebellum_neuroectodermal_Monocytederived_Macrophage_carcinoid_Neural_neuroblastoma |
Association with transcript: | 24bp_to_ENST00000539401, NM_014790, uc003loq.1, uc003lor.1, uc011dbx.1_5end |
EntrezGene: | JAKMIP2 |
HGNC: | 29067 |
UniProt: | F5H3A5Q96AA8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.80e-14 | 48 |
phagocyte | 1.80e-14 | 48 |
monopoietic cell | 4.15e-10 | 59 |
monocyte | 4.15e-10 | 59 |
monoblast | 4.15e-10 | 59 |
promonocyte | 4.15e-10 | 59 |
myeloid lineage restricted progenitor cell | 4.79e-10 | 66 |
classical monocyte | 6.64e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.64e-10 | 42 |
granulocyte monocyte progenitor cell | 9.76e-10 | 67 |
macrophage dendritic cell progenitor | 1.89e-09 | 61 |
hematopoietic lineage restricted progenitor cell | 9.63e-09 | 120 |
nongranular leukocyte | 1.29e-08 | 115 |
myeloid leukocyte | 2.44e-08 | 72 |
macrophage | 1.03e-07 | 6 |
leukocyte | 6.94e-07 | 136 |
neuronal stem cell | 7.18e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.20e-10 | 10 |
neuroendocrine tumor | 9.88e-07 | 6 |