FFCP PHASE1:Hg19::chr11:118829024..118829034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7379 | |EntrezGene=7379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12579 | |HGNC=12579 | ||
|TSSclassifier=strong | |||
|UniProt=O00526 | |UniProt=O00526 | ||
|association_with_transcript=200bp_to_AF000562_5end | |association_with_transcript=200bp_to_AF000562_5end | ||
|cluster_id=chr11:118829024..118829034,+ | |||
|coexpression_cluster_id=C3092 | |coexpression_cluster_id=C3092 | ||
|description=CAGE_peak_7_at_UPK2_5end | |description=CAGE_peak_7_at_UPK2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.18e-34;1!UBERON:0005425;7.05e-34;1!UBERON:0003056;2.89e-12;3 | |ontology_enrichment_development_v019=UBERON:0000358;2.18e-34;1!UBERON:0005425;7.05e-34;1!UBERON:0003056;2.89e-12;3 | ||
|ontology_enrichment_disease=DOID:7!5.12e-07!39 | |ontology_enrichment_disease=DOID:7!5.12e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:178;2.18e-34;1!DOID:326;2.18e-34;1!DOID:3978;2.18e-34;1!DOID:3394;2.18e-34;1!DOID:5844;2.18e-34;1!DOID:114;5.96e-18;2!DOID:1287;1.17e-09;4 | |ontology_enrichment_disease_v019=DOID:178;2.18e-34;1!DOID:326;2.18e-34;1!DOID:3978;2.18e-34;1!DOID:3394;2.18e-34;1!DOID:5844;2.18e-34;1!DOID:114;5.96e-18;2!DOID:1287;1.17e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:178,2.58e-34,1;DOID:326,2.58e-34,1;DOID:3978,2.58e-34,1;DOID:3394,2.58e-34,1;DOID:5844,2.58e-34,1;DOID:114,6.48e-18,2;DOID:1287,1.22e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000162!5.42e-13!14;UBERON:0001353!5.42e-13!14;UBERON:0000163!5.42e-13!14;UBERON:0006866!5.42e-13!14;UBERON:0000164!5.42e-13!14;UBERON:0000931!5.42e-13!14;UBERON:0001046!2.60e-12!19;UBERON:0004122!4.60e-12!15;UBERON:0002394!8.49e-10!4;UBERON:0003928!8.49e-10!4;UBERON:0002294!1.44e-09!7;UBERON:0001173!1.44e-09!7;UBERON:0004912!1.44e-09!7;UBERON:0001255!6.77e-09!2;UBERON:0001556!6.77e-09!2 | |ontology_enrichment_uberon=UBERON:0000162!5.42e-13!14;UBERON:0001353!5.42e-13!14;UBERON:0000163!5.42e-13!14;UBERON:0006866!5.42e-13!14;UBERON:0000164!5.42e-13!14;UBERON:0000931!5.42e-13!14;UBERON:0001046!2.60e-12!19;UBERON:0004122!4.60e-12!15;UBERON:0002394!8.49e-10!4;UBERON:0003928!8.49e-10!4;UBERON:0002294!1.44e-09!7;UBERON:0001173!1.44e-09!7;UBERON:0004912!1.44e-09!7;UBERON:0001255!6.77e-09!2;UBERON:0001556!6.77e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000996;7.05e-34;1!UBERON:0000941;7.05e-34;1!UBERON:0001785;7.05e-34;1!UBERON:0002464;7.05e-34;1!UBERON:0004904;7.05e-34;1!UBERON:0001021;7.05e-34;1!UBERON:0003714;1.07e-17;2!UBERON:0005162;1.07e-17;2!UBERON:0000122;1.07e-17;2!UBERON:0001052;1.57e-09;4!UBERON:0004907;7.01e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0000996;7.05e-34;1!UBERON:0000941;7.05e-34;1!UBERON:0001785;7.05e-34;1!UBERON:0002464;7.05e-34;1!UBERON:0004904;7.05e-34;1!UBERON:0001021;7.05e-34;1!UBERON:0003714;1.07e-17;2!UBERON:0005162;1.07e-17;2!UBERON:0000122;1.07e-17;2!UBERON:0001052;1.57e-09;4!UBERON:0004907;7.01e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.06e-34,1;UBERON:0001785,7.06e-34,1;UBERON:0002464,7.06e-34,1;UBERON:0004904,7.06e-34,1;UBERON:0001021,7.06e-34,1;UBERON:0003902,7.06e-34,1;UBERON:0005425,7.06e-34,1;UBERON:0000996,9.85e-34,1;UBERON:0003714,1.07e-17,2;UBERON:0005162,1.07e-17,2;UBERON:0000122,1.07e-17,2;UBERON:0001052,1.44e-09,4;UBERON:0001781,1.57e-09,4;UBERON:0004907,6.55e-08,5;UBERON:0001046,6.59e-08,19;UBERON:0000966,8.97e-07,6;UBERON:0005388,8.97e-07,6;UBERON:0001802,8.97e-07,6 | |||
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| ||
|short_description=p7@UPK2 | |short_description=p7@UPK2 | ||
}} | }} |
Latest revision as of 02:06, 16 September 2015
Short description: | p7@UPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UPK2_5end |
Coexpression cluster: | C3092_umbilical_heart_choriocarcinoma_rectal_Placental_MCF7_optic |
Association with transcript: | 200bp_to_AF000562_5end |
EntrezGene: | UPK2 |
HGNC: | 12579 |
UniProt: | O00526 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.06e-34 | 1 |
cranial nerve | 7.06e-34 | 1 |
nerve trunk | 7.06e-34 | 1 |
nerve connecting eye with brain | 7.06e-34 | 1 |
nerve | 7.06e-34 | 1 |
retinal neural layer | 7.06e-34 | 1 |
presumptive neural retina | 7.06e-34 | 1 |
vagina | 9.85e-34 | 1 |
neural tissue | 1.07e-17 | 2 |
multi cell component structure | 1.07e-17 | 2 |
neuron projection bundle | 1.07e-17 | 2 |
rectum | 1.44e-09 | 4 |
layer of retina | 1.57e-09 | 4 |
lower digestive tract | 6.55e-08 | 5 |
hindgut | 6.59e-08 | 19 |
retina | 8.97e-07 | 6 |
photoreceptor array | 8.97e-07 | 6 |
posterior segment of eyeball | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.58e-34 | 1 |
ischemia | 2.58e-34 | 1 |
extrinsic cardiomyopathy | 2.58e-34 | 1 |
myocardial ischemia | 2.58e-34 | 1 |
myocardial infarction | 2.58e-34 | 1 |
heart disease | 6.48e-18 | 2 |
cardiovascular system disease | 1.22e-09 | 4 |