FFCP PHASE1:Hg19::chr11:118868830..118868904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338657 | |EntrezGene=338657 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30460 | |HGNC=30460 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UT8,E9PPT8,E9PJ16 | |UniProt=Q86UT8,E9PPT8,E9PJ16 | ||
|association_with_transcript=0bp_to_ENST00000334418,ENST00000524670,ENST00000526463,ENST00000532132,ENST00000534656,NM_198489,uc001pul.2,uc010ryk.1,uc010ryl.1,uc010rym.1_5end | |association_with_transcript=0bp_to_ENST00000334418,ENST00000524670,ENST00000526463,ENST00000532132,ENST00000534656,NM_198489,uc001pul.2,uc010ryk.1,uc010ryl.1,uc010rym.1_5end | ||
|cluster_id=chr11:118868830..118868904,+ | |||
|description=CAGE_peak_1_at_CCDC84_5end | |description=CAGE_peak_1_at_CCDC84_5end | ||
|id=chr11:118868830..118868904,+ | |id=chr11:118868830..118868904,+ | ||
|ontology_enrichment_celltype=CL:0000791;6.60e-11;18!CL:0000789;6.60e-11;18!CL:0002419;6.60e-11;18!CL:0000084;4.94e-09;25!CL:0000860;9.01e-09;33!CL:0002057;9.01e-09;33!CL:0002087;1.27e-07;104!CL:0000625;2.81e-07;11!CL:0000576;4.64e-07;48 | |ontology_enrichment_celltype=CL:0000738!4.01e-26!140;CL:0000037!8.14e-23!172;CL:0000566!8.14e-23!172;CL:0002032!3.35e-21!165;CL:0000837!3.35e-21!165;CL:0000988!7.12e-21!182;CL:0002031!8.39e-21!124;CL:0002087!1.45e-19!119;CL:0000860!3.52e-12!45;CL:0000766!3.82e-12!76;CL:0002057!2.15e-11!42;CL:0000763!5.33e-11!112;CL:0000049!5.33e-11!112;CL:0000791!7.85e-11!18;CL:0000789!7.85e-11!18;CL:0002420!7.85e-11!18;CL:0002419!7.85e-11!18;CL:0000790!7.85e-11!18;CL:0000838!8.09e-11!52;CL:0000557!1.01e-10!71;CL:0000542!1.07e-10!53;CL:0000051!1.07e-10!53;CL:0000839!1.07e-09!70;CL:0002009!5.18e-09!65;CL:0000084!5.28e-09!25;CL:0000827!5.28e-09!25;CL:0002194!3.16e-08!63;CL:0000576!3.16e-08!63;CL:0000040!3.16e-08!63;CL:0000559!3.16e-08!63;CL:0000625!3.01e-07!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;6.60e-11;18!CL:0000789;6.60e-11;18!CL:0002419;6.60e-11;18!CL:0000084;4.94e-09;25!CL:0000860;9.01e-09;33!CL:0002057;9.01e-09;33!CL:0002087;1.27e-07;104!CL:0000625;2.81e-07;11!CL:0000576;4.64e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.64e-26,136;CL:0000037,1.42e-22,168;CL:0000988,4.05e-21,177;CL:0002032,5.75e-21,161;CL:0000837,5.75e-21,161;CL:0002031,1.19e-20,120;CL:0002087,2.05e-19,115;CL:0000766,4.97e-12,72;CL:0000860,2.15e-11,42;CL:0002057,2.15e-11,42;CL:0000791,7.85e-11,18;CL:0000789,7.85e-11,18;CL:0002420,7.85e-11,18;CL:0002419,7.85e-11,18;CL:0000790,7.85e-11,18;CL:0000838,8.09e-11,52;CL:0000763,8.52e-11,108;CL:0000049,8.52e-11,108;CL:0000542,1.07e-10,53;CL:0000051,1.07e-10,53;CL:0000557,1.34e-10,67;CL:0000839,1.47e-09,66;CL:0000084,5.28e-09,25;CL:0000827,5.28e-09,25;CL:0000473,5.55e-09,48;CL:0000234,5.55e-09,48;CL:0002009,7.11e-09,61;CL:0002194,4.44e-08,59;CL:0000576,4.44e-08,59;CL:0000040,4.44e-08,59;CL:0000559,4.44e-08,59;CL:0000625,3.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.60e-11;18!CL:0002057;1.57e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001893;2.47e-09;34!UBERON:0002780;6.33e-09;41!UBERON:0001890;6.33e-09;41!UBERON:0001869;7.43e-09;32!UBERON:0002791;7.91e-09;32!UBERON:0003528;8.99e-09;34!UBERON:0002020;8.99e-09;34!UBERON:0000073;1.35e-08;53!UBERON:0002616;1.35e-08;53!UBERON:0002619;9.57e-08;22!UBERON:0000956;2.89e-07;25!UBERON:0000203;2.89e-07;25!UBERON:0001950;3.08e-07;20 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.52e-19!115;UBERON:0001049!4.50e-14!57;UBERON:0005068!4.50e-14!57;UBERON:0006241!4.50e-14!57;UBERON:0007135!4.50e-14!57;UBERON:0002390!2.91e-13!102;UBERON:0003061!2.91e-13!102;UBERON:0002780!3.97e-12!41;UBERON:0001890!3.97e-12!41;UBERON:0006240!3.97e-12!41;UBERON:0003080!1.02e-11!42;UBERON:0000073!8.44e-11!94;UBERON:0001016!8.44e-11!94;UBERON:0002616!1.07e-10!59;UBERON:0002193!1.09e-10!112;UBERON:0001893!1.34e-10!34;UBERON:0001017!1.85e-10!82;UBERON:0002791!3.42e-10!33;UBERON:0000955!4.25e-10!69;UBERON:0006238!4.25e-10!69;UBERON:0005743!4.87e-10!86;UBERON:0002020!5.34e-10!34;UBERON:0003528!5.34e-10!34;UBERON:0001869!1.17e-09!32;UBERON:0002371!1.44e-08!80;UBERON:0002346!6.55e-08!90;UBERON:0002619!9.78e-08!22;UBERON:0003075!1.70e-07!86;UBERON:0007284!1.70e-07!86;UBERON:0001474!1.76e-07!86;UBERON:0001950!3.01e-07!20;UBERON:0000956!3.09e-07!25;UBERON:0000203!3.09e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.47e-09;34!UBERON:0002780;6.33e-09;41!UBERON:0001890;6.33e-09;41!UBERON:0001869;7.43e-09;32!UBERON:0002791;7.91e-09;32!UBERON:0003528;8.99e-09;34!UBERON:0002020;8.99e-09;34!UBERON:0000073;1.35e-08;53!UBERON:0002616;1.35e-08;53!UBERON:0002619;9.57e-08;22!UBERON:0000956;2.89e-07;25!UBERON:0000203;2.89e-07;25!UBERON:0001950;3.08e-07;20 | |||
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| ||
|short_description=p1@CCDC84 | |short_description=p1@CCDC84 | ||
}} | }} |
Latest revision as of 02:12, 16 September 2015
Short description: | p1@CCDC84 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC84_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334418, ENST00000524670, ENST00000526463, ENST00000532132, ENST00000534656, NM_198489, uc001pul.2, uc010ryk.1, uc010ryl.1, uc010rym.1_5end |
EntrezGene: | CCDC84 |
HGNC: | 30460 |
UniProt: | Q86UT8E9PPT8E9PJ16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.53e-19 | 114 |
neural tube | 1.89e-14 | 56 |
neural rod | 1.89e-14 | 56 |
future spinal cord | 1.89e-14 | 56 |
neural keel | 1.89e-14 | 56 |
regional part of nervous system | 4.37e-14 | 53 |
regional part of brain | 4.37e-14 | 53 |
hematopoietic system | 4.31e-13 | 98 |
blood island | 4.31e-13 | 98 |
regional part of forebrain | 3.97e-12 | 41 |
forebrain | 3.97e-12 | 41 |
anterior neural tube | 3.97e-12 | 41 |
future forebrain | 3.97e-12 | 41 |
nervous system | 2.00e-11 | 89 |
central nervous system | 1.11e-10 | 81 |
telencephalon | 1.34e-10 | 34 |
hemolymphoid system | 1.74e-10 | 108 |
brain | 2.43e-10 | 68 |
future brain | 2.43e-10 | 68 |
brain grey matter | 5.34e-10 | 34 |
gray matter | 5.34e-10 | 34 |
regional part of telencephalon | 1.08e-09 | 32 |
cerebral hemisphere | 1.17e-09 | 32 |
bone marrow | 2.18e-08 | 76 |
neurectoderm | 5.74e-08 | 86 |
regional part of cerebral cortex | 9.78e-08 | 22 |
neural plate | 1.50e-07 | 82 |
presumptive neural plate | 1.50e-07 | 82 |
bone element | 2.75e-07 | 82 |
neocortex | 3.01e-07 | 20 |
cerebral cortex | 3.09e-07 | 25 |
pallium | 3.09e-07 | 25 |
immune system | 3.89e-07 | 93 |