FFCP PHASE1:Hg19::chr14:88459424..88459442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2581 | |EntrezGene=2581 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4115 | |HGNC=4115 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000474294_5end | |association_with_transcript=55bp_to_ENST00000474294_5end | ||
|cluster_id=chr14:88459424..88459442,- | |||
|coexpression_cluster_id=C2319 | |||
|description=CAGE_peak_5_at_GALC_5end | |description=CAGE_peak_5_at_GALC_5end | ||
|id=chr14:88459424..88459442,- | |id=chr14:88459424..88459442,- | ||
|ontology_enrichment_celltype=CL:0000763!6.42e-27!112;CL:0000049!6.42e-27!112;CL:0000766!8.40e-26!76;CL:0002032!6.75e-24!165;CL:0000837!6.75e-24!165;CL:0000738!1.44e-23!140;CL:0000037!2.16e-23!172;CL:0000566!2.16e-23!172;CL:0000988!1.48e-22!182;CL:0002057!3.53e-22!42;CL:0000839!2.13e-21!70;CL:0000557!3.16e-21!71;CL:0000860!2.56e-19!45;CL:0002009!1.77e-18!65;CL:0002031!3.39e-18!124;CL:0002194!3.86e-17!63;CL:0000576!3.86e-17!63;CL:0000040!3.86e-17!63;CL:0000559!3.86e-17!63;CL:0002087!6.90e-15!119;CL:0000094!3.08e-07!8 | |ontology_enrichment_celltype=CL:0000763!6.42e-27!112;CL:0000049!6.42e-27!112;CL:0000766!8.40e-26!76;CL:0002032!6.75e-24!165;CL:0000837!6.75e-24!165;CL:0000738!1.44e-23!140;CL:0000037!2.16e-23!172;CL:0000566!2.16e-23!172;CL:0000988!1.48e-22!182;CL:0002057!3.53e-22!42;CL:0000839!2.13e-21!70;CL:0000557!3.16e-21!71;CL:0000860!2.56e-19!45;CL:0002009!1.77e-18!65;CL:0002031!3.39e-18!124;CL:0002194!3.86e-17!63;CL:0000576!3.86e-17!63;CL:0000040!3.86e-17!63;CL:0000559!3.86e-17!63;CL:0002087!6.90e-15!119;CL:0000094!3.08e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-19;33!CL:0002057;2.06e-19;33!CL:0000576;8.37e-19;48!CL:0000766;9.92e-18;69!CL:0000473;2.39e-16;39!CL:0000234;2.39e-16;39!CL:0000763;1.88e-14;100!CL:0000094;2.74e-12;8!CL:0000097;1.02e-10;5!CL:0000453;1.94e-10;5!CL:0000081;1.62e-08;11!CL:0000738;2.49e-07;136!CL:0000775;4.04e-07;3!CL:0002393;6.28e-07;6!CL:0002397;6.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.27e-46,108;CL:0000049,1.27e-46,108;CL:0000766,2.83e-39,72;CL:0000037,3.78e-34,168;CL:0002032,5.50e-34,161;CL:0000837,5.50e-34,161;CL:0000557,5.61e-32,67;CL:0000988,2.23e-31,177;CL:0000738,1.04e-30,136;CL:0000839,3.82e-30,66;CL:0000860,6.28e-26,42;CL:0002057,6.28e-26,42;CL:0002009,1.20e-25,61;CL:0000473,3.50e-25,48;CL:0000234,3.50e-25,48;CL:0002194,5.54e-23,59;CL:0000576,5.54e-23,59;CL:0000040,5.54e-23,59;CL:0000559,5.54e-23,59;CL:0002031,8.39e-21,120;CL:0002087,8.56e-15,115;CL:0000094,2.89e-12,8;CL:0000097,9.89e-11,5;CL:0002028,9.89e-11,5;CL:0000453,2.03e-10,5;CL:0000081,1.68e-08,11;CL:0000775,3.89e-07,3;CL:0000134,6.08e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;8.72e-19;42!CL:0000049;3.68e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-22!102;UBERON:0003061!1.72e-22!102;UBERON:0007023!2.85e-19!115;UBERON:0002193!8.94e-19!112;UBERON:0002371!6.37e-16!80;UBERON:0001474!4.29e-15!86;UBERON:0001049!3.18e-12!57;UBERON:0005068!3.18e-12!57;UBERON:0006241!3.18e-12!57;UBERON:0007135!3.18e-12!57;UBERON:0004765!7.07e-12!101;UBERON:0001434!7.07e-12!101;UBERON:0002405!2.15e-09!115;UBERON:0002616!3.73e-09!59;UBERON:0002020!4.35e-09!34;UBERON:0003528!4.35e-09!34;UBERON:0001893!1.06e-08!34;UBERON:0003080!1.09e-08!42;UBERON:0002791!1.83e-08!33;UBERON:0002780!2.31e-08!41;UBERON:0001890!2.31e-08!41;UBERON:0006240!2.31e-08!41;UBERON:0001869!4.79e-08!32;UBERON:0002619!2.54e-07!22;UBERON:0003075!3.55e-07!86;UBERON:0007284!3.55e-07!86;UBERON:0005743!8.79e-07!86;UBERON:0000073!9.45e-07!94;UBERON:0001016!9.45e-07!94 | |ontology_enrichment_uberon=UBERON:0002390!1.72e-22!102;UBERON:0003061!1.72e-22!102;UBERON:0007023!2.85e-19!115;UBERON:0002193!8.94e-19!112;UBERON:0002371!6.37e-16!80;UBERON:0001474!4.29e-15!86;UBERON:0001049!3.18e-12!57;UBERON:0005068!3.18e-12!57;UBERON:0006241!3.18e-12!57;UBERON:0007135!3.18e-12!57;UBERON:0004765!7.07e-12!101;UBERON:0001434!7.07e-12!101;UBERON:0002405!2.15e-09!115;UBERON:0002616!3.73e-09!59;UBERON:0002020!4.35e-09!34;UBERON:0003528!4.35e-09!34;UBERON:0001893!1.06e-08!34;UBERON:0003080!1.09e-08!42;UBERON:0002791!1.83e-08!33;UBERON:0002780!2.31e-08!41;UBERON:0001890!2.31e-08!41;UBERON:0006240!2.31e-08!41;UBERON:0001869!4.79e-08!32;UBERON:0002619!2.54e-07!22;UBERON:0003075!3.55e-07!86;UBERON:0007284!3.55e-07!86;UBERON:0005743!8.79e-07!86;UBERON:0000073!9.45e-07!94;UBERON:0001016!9.45e-07!94 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.53e-28,98;UBERON:0003061,1.53e-28,98;UBERON:0002371,9.53e-27,76;UBERON:0002193,1.41e-24,108;UBERON:0001474,6.58e-24,82;UBERON:0002405,6.89e-21,93;UBERON:0004765,1.00e-20,90;UBERON:0001434,1.74e-17,100;UBERON:0003081,1.03e-08,203;UBERON:0002204,2.24e-07,167 | |||
|phase1_expression=0,0,0.563817616383885,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.236132343941038,8.65401409067589,3.0706351847777,0.619264493264304,0,0,0.369754010166788,0.154934401160603,0,0,2.21598163412751,4.21143339687298,1.95309783644267,1.79132379391939,1.6194683300949,2.31818010870768,0.581592955118259,0,1.21292030593908,0.697287110717054,0.411167888021826,2.16794459626573,7.48000220037591,5.37937483711111,10.1687358852092,3.10271112662957,1.29096936716765,5.41705946377367,0.941211697713023,0.818718450173537,0.449446968890169,3.97909060082173,1.92557416245656,5.11469700639233,4.94776950280074,3.19141852194611,4.26224750532694,1.7412554317715,1.13477044938228,0.622822248995575,8.29120595347253,4.17186334736161,9.77349801173025,3.02699751316684,1.10483290796269,1.26584954976354,1.05627643155971,0.425208599930087,1.25795187305026,0.673971786878971,0.600707571366025,0.964353520182481,0.570025487482497,0.79566670879636,1.27864907635244,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,1.68152568894461,0,0,0.786021525498329,0.205601498999509,0,0.32592226663359,0,0,2.22820913770347,0.589211814949674,0.221533894583621,0.541607727530031,1.15282187753108,0.910415432919148,0.164437904603676,0.276350017785848,0.579606171470105,0,0,0,0,1.53288197440768,1.03088233644789,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0.76791966692651,3.74792179657038,0,0.821127996921047,1.61285394579786,1.60464117470104,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.11332214173056,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,23.7204751384914,42.6558290563158,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.919463387397059,0.45071417671979,0.226864366320042,0,0,0,0,0.206105058476878,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,2.37061319387782,0,1.23108503043699,0.468008530278475,0.743155811443641,0,0,0.283550194484773,0.0895585227028483,0,0,16.2578868505661,12.062635459812,10.3664057770386,4.90007841617669,18.0526679799723,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.299918973546171,0,2.00902836572851,0,0,0,0,0.144781306667579,0.205476322550383,0,0,2.56139988262505,3.23441362289276,2.18183161675572,0.254094624222463,0,0,0.670065061337395,0,10.4860983352606,8.97484377612075,17.8198670777495,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,1.07857100409308,1.70764092485511,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.482561763430822,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,1.09629938322967,0.784306353074702,0.256450125116389,0,0.650756789328606,0.515205058238611,0.457847324091717,0.330037999682352,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0.576570202095319,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0,0,0.571890581771475,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0,0,0,0,0,1.08890984861323,0.847294206991012,0,0,0,0,2.02979043692868,0,0.569647187174163,2.38231775457789,0.822724546172388,0.648473311192717,2.70015718619057,1.58625035258854,0,0,0,0.371606350251437,0,0.142283686696828,0,0,0,1.69338866179106,0.324621940274555,0.280797178113459,0,0,0,0,0,0.201799707191048,1.70338495076131,1.71752672377882,0.307240764308458,0,0,0,4.73290495621912,0,1.35227839237992,3.66379164797602,1.4098700508785,1.12284324244932,0.146508179271894,0,0.66866030566487,0,0,0,0.614321404198464,0.994147647766298,0.984685914873589,0.333926115068718,0.824019371133798,0,0.796991953004279,1.10513566212459,0,0.102268682502155,0,0.311039587661807,0.359473404589307,0,1.02314474045374,0.493217028184668,2.3948309234694,0,0,0.185536196323703,0,0.260427761085233,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,1.08536794762867,1.52581736317083,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,0,0.108647371922008,0.31900115973192,0.366390373607449,0,0,0.156980256395025,3.32423363800313,0,0,0,0,1.58936578980379,0,0,0,0,0.995261931078505,0.796118080530053,1.22206028986725,0.593042257361244,0.494255755786011,0.730953646538188,0.876214728748802,2.407732941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| ||
|short_description=p5@GALC | |short_description=p5@GALC | ||
}} | }} |
Latest revision as of 10:05, 16 September 2015
Short description: | p5@GALC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GALC_5end |
Coexpression cluster: | C2319_Eosinophils_large_immature_Neutrophils_small_migratory_Mast |
Association with transcript: | 55bp_to_ENST00000474294_5end |
EntrezGene: | GALC |
HGNC: | 4115 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.27e-46 | 108 |
common myeloid progenitor | 1.27e-46 | 108 |
myeloid leukocyte | 2.83e-39 | 72 |
hematopoietic stem cell | 3.78e-34 | 168 |
hematopoietic oligopotent progenitor cell | 5.50e-34 | 161 |
hematopoietic multipotent progenitor cell | 5.50e-34 | 161 |
granulocyte monocyte progenitor cell | 5.61e-32 | 67 |
hematopoietic cell | 2.23e-31 | 177 |
leukocyte | 1.04e-30 | 136 |
myeloid lineage restricted progenitor cell | 3.82e-30 | 66 |
classical monocyte | 6.28e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.28e-26 | 42 |
macrophage dendritic cell progenitor | 1.20e-25 | 61 |
defensive cell | 3.50e-25 | 48 |
phagocyte | 3.50e-25 | 48 |
monopoietic cell | 5.54e-23 | 59 |
monocyte | 5.54e-23 | 59 |
monoblast | 5.54e-23 | 59 |
promonocyte | 5.54e-23 | 59 |
hematopoietic lineage restricted progenitor cell | 8.39e-21 | 120 |
nongranular leukocyte | 8.56e-15 | 115 |
granulocyte | 2.89e-12 | 8 |
mast cell | 9.89e-11 | 5 |
basophil mast progenitor cell | 9.89e-11 | 5 |
Langerhans cell | 2.03e-10 | 5 |
blood cell | 1.68e-08 | 11 |
neutrophil | 3.89e-07 | 3 |
mesenchymal cell | 6.08e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.53e-28 | 98 |
blood island | 1.53e-28 | 98 |
bone marrow | 9.53e-27 | 76 |
hemolymphoid system | 1.41e-24 | 108 |
bone element | 6.58e-24 | 82 |
immune system | 6.89e-21 | 93 |
skeletal element | 1.00e-20 | 90 |
skeletal system | 1.74e-17 | 100 |
lateral plate mesoderm | 1.03e-08 | 203 |
musculoskeletal system | 2.24e-07 | 167 |