FFCP PHASE1:Hg19::chr13:111160268..111160380,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1284 | |EntrezGene=1284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2203 | |HGNC=2203 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC016166_5end | |association_with_transcript=0bp_to_BC016166_5end | ||
|cluster_id=chr13:111160268..111160380,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_3_at_COL4A2_5end | |description=CAGE_peak_3_at_COL4A2_5end | ||
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|ontology_enrichment_celltype=CL:0000222!3.26e-09!119;CL:0000055!4.79e-07!180;CL:1000449!9.17e-07!16 | |ontology_enrichment_celltype=CL:0000222!3.26e-09!119;CL:0000055!4.79e-07!180;CL:1000449!9.17e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000746;2.89e-09;7!CL:1000612;2.89e-09;7!CL:1000449;2.59e-08;15!CL:0002138;2.02e-07;6!CL:0002188;2.92e-07;5!CL:1000497;5.14e-07;17!CL:0002518;5.14e-07;17 | |ontology_enrichment_celltype_v019=CL:1000746;2.89e-09;7!CL:1000612;2.89e-09;7!CL:1000449;2.59e-08;15!CL:0002138;2.02e-07;6!CL:0002188;2.92e-07;5!CL:1000497;5.14e-07;17!CL:0002518;5.14e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000746,3.92e-09,7;CL:1000612,3.92e-09,7;CL:1000449,2.59e-08,15;CL:0005020,1.23e-07,6;CL:0002138,1.23e-07,6;CL:0005022,1.23e-07,6;CL:1000497,5.13e-07,17;CL:0002518,5.13e-07,17;CL:0002188,5.69e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;2.02e-07;6 | |ontology_enrichment_development_v019=CL:0005022;2.02e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.24e-11!118;UBERON:0005256!2.12e-10!143;UBERON:0000490!3.72e-10!138;UBERON:0002049!5.54e-10!79;UBERON:0007798!5.54e-10!79;UBERON:0000058!7.70e-09!26;UBERON:0004876!1.23e-08!20;UBERON:0002100!2.62e-08!216;UBERON:0002417!3.51e-08!61;UBERON:0000916!3.51e-08!61;UBERON:0003064!8.47e-08!37;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0003886!1.31e-07!63;UBERON:0001009!1.56e-07!113;UBERON:0000055!1.91e-07!69;UBERON:0003887!1.98e-07!21;UBERON:0006555!3.90e-07!17;UBERON:0005103!3.90e-07!17;UBERON:0000083!3.90e-07!17;UBERON:0009201!3.90e-07!17;UBERON:0004819!3.90e-07!17;UBERON:0006553!3.90e-07!17;UBERON:0003074!3.90e-07!17;UBERON:0003060!3.90e-07!17;UBERON:0004535!4.32e-07!110;UBERON:0000353!4.63e-07!17;UBERON:0003104!4.99e-07!238;UBERON:0009142!4.99e-07!238;UBERON:0002553!7.78e-07!70;UBERON:0004211!9.17e-07!16;UBERON:0001285!9.17e-07!16;UBERON:0007684!9.17e-07!16;UBERON:0003220!9.17e-07!16;UBERON:0004208!9.17e-07!16 | |ontology_enrichment_uberon=UBERON:0003914!2.24e-11!118;UBERON:0005256!2.12e-10!143;UBERON:0000490!3.72e-10!138;UBERON:0002049!5.54e-10!79;UBERON:0007798!5.54e-10!79;UBERON:0000058!7.70e-09!26;UBERON:0004876!1.23e-08!20;UBERON:0002100!2.62e-08!216;UBERON:0002417!3.51e-08!61;UBERON:0000916!3.51e-08!61;UBERON:0003064!8.47e-08!37;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0003886!1.31e-07!63;UBERON:0001009!1.56e-07!113;UBERON:0000055!1.91e-07!69;UBERON:0003887!1.98e-07!21;UBERON:0006555!3.90e-07!17;UBERON:0005103!3.90e-07!17;UBERON:0000083!3.90e-07!17;UBERON:0009201!3.90e-07!17;UBERON:0004819!3.90e-07!17;UBERON:0006553!3.90e-07!17;UBERON:0003074!3.90e-07!17;UBERON:0003060!3.90e-07!17;UBERON:0004535!4.32e-07!110;UBERON:0000353!4.63e-07!17;UBERON:0003104!4.99e-07!238;UBERON:0009142!4.99e-07!238;UBERON:0002553!7.78e-07!70;UBERON:0004211!9.17e-07!16;UBERON:0001285!9.17e-07!16;UBERON:0007684!9.17e-07!16;UBERON:0003220!9.17e-07!16;UBERON:0004208!9.17e-07!16 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.89e-09;7!UBERON:0001229;2.89e-09;7!UBERON:0005409;3.87e-09;22!UBERON:0006555;2.59e-08;15!UBERON:0004819;2.59e-08;15!UBERON:0001285;2.59e-08;15!UBERON:0007684;2.59e-08;15!UBERON:0003688;3.11e-08;6!UBERON:0002358;3.11e-08;6!UBERON:0003684;3.11e-08;6!UBERON:0001178;3.11e-08;6!UBERON:0000160;1.13e-07;17!UBERON:0001473;1.88e-07;8!UBERON:0004536;1.88e-07;8!UBERON:0006558;1.88e-07;8!UBERON:0000353;2.03e-07;15!UBERON:0002423;8.30e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000074;2.89e-09;7!UBERON:0001229;2.89e-09;7!UBERON:0005409;3.87e-09;22!UBERON:0006555;2.59e-08;15!UBERON:0004819;2.59e-08;15!UBERON:0001285;2.59e-08;15!UBERON:0007684;2.59e-08;15!UBERON:0003688;3.11e-08;6!UBERON:0002358;3.11e-08;6!UBERON:0003684;3.11e-08;6!UBERON:0001178;3.11e-08;6!UBERON:0000160;1.13e-07;17!UBERON:0001473;1.88e-07;8!UBERON:0004536;1.88e-07;8!UBERON:0006558;1.88e-07;8!UBERON:0000353;2.03e-07;15!UBERON:0002423;8.30e-07;25 | ||
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| ||
|short_description=p3@COL4A2 | |short_description=p3@COL4A2 | ||
}} | }} |
Latest revision as of 13:02, 16 September 2015
Short description: | p3@COL4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL4A2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_BC016166_5end |
EntrezGene: | COL4A2 |
HGNC: | 2203 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 3.92e-09 | 7 |
kidney corpuscule cell | 3.92e-09 | 7 |
epithelial cell of nephron | 2.59e-08 | 15 |
lymphangioblast | 1.23e-07 | 6 |
endothelial cell of lymphatic vessel | 1.23e-07 | 6 |
vascular lymphangioblast | 1.23e-07 | 6 |
kidney cell | 5.13e-07 | 17 |
kidney epithelial cell | 5.13e-07 | 17 |
glomerular endothelial cell | 5.69e-07 | 5 |