FFCP PHASE1:Hg19::chr15:31283767..31283793,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:31283767..31283793,-
|short_description=p3@MTMR10
|description=CAGE_peak_3_at_MTMR10_5end
|association_with_transcript=13bp_to_ENST00000340566,ENST0000042...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54893 | |EntrezGene=54893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25999 | |HGNC=25999 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGL9,Q9NXD2,Q0IJ45 | |UniProt=A6NGL9,Q9NXD2,Q0IJ45 | ||
|association_with_transcript=13bp_to_ENST00000340566,ENST00000425768,ENST00000435680,NM_017762,uc001zfh.1,uc001zfi.1,uc001zfk.2,uc010azx.1_5end | |||
|cluster_id=chr15:31283767..31283793,- | |||
|coexpression_cluster_id=C3476 | |||
|description=CAGE_peak_3_at_MTMR10_5end | |||
|id=chr15:31283767..31283793,- | |||
|ontology_enrichment_celltype=CL:0000766!1.13e-28!76;CL:0002009!1.04e-24!65;CL:0002057!1.12e-24!42;CL:0000557!2.39e-24!71;CL:0002194!7.48e-24!63;CL:0000576!7.48e-24!63;CL:0000040!7.48e-24!63;CL:0000559!7.48e-24!63;CL:0000860!1.32e-23!45;CL:0000839!1.79e-23!70;CL:0000763!6.99e-15!112;CL:0000049!6.99e-15!112;CL:0000738!2.31e-13!140;CL:0002031!2.41e-09!124;CL:0002087!1.04e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.50e-18;33!CL:0002057;2.50e-18;33!CL:0000473;3.53e-17;39!CL:0000234;3.53e-17;39!CL:0000576;2.51e-15;48!CL:0000766;3.90e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.08e-30,72;CL:0000473,4.71e-27,48;CL:0000234,4.71e-27,48;CL:0002009,5.99e-26,61;CL:0000557,1.86e-25,67;CL:0002194,4.43e-25,59;CL:0000576,4.43e-25,59;CL:0000040,4.43e-25,59;CL:0000559,4.43e-25,59;CL:0000860,5.27e-25,42;CL:0002057,5.27e-25,42;CL:0000839,1.51e-24,66;CL:0000763,1.01e-15,108;CL:0000049,1.01e-15,108;CL:0000738,1.90e-13,136;CL:0002031,2.13e-09,120;CL:0002087,1.07e-08,115;CL:0000037,7.52e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.50e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.37e-23!112;UBERON:0002390!2.36e-20!102;UBERON:0003061!2.36e-20!102;UBERON:0002405!2.82e-20!115;UBERON:0002371!1.13e-18!80;UBERON:0003081!1.07e-17!216;UBERON:0001474!9.28e-16!86;UBERON:0007023!1.25e-14!115;UBERON:0004765!1.52e-12!101;UBERON:0001434!1.52e-12!101;UBERON:0001049!7.04e-10!57;UBERON:0005068!7.04e-10!57;UBERON:0006241!7.04e-10!57;UBERON:0007135!7.04e-10!57;UBERON:0002204!6.52e-09!167;UBERON:0002616!1.08e-08!59;UBERON:0000955!4.05e-08!69;UBERON:0006238!4.05e-08!69;UBERON:0005743!1.66e-07!86;UBERON:0003080!1.91e-07!42;UBERON:0002020!2.31e-07!34;UBERON:0003528!2.31e-07!34;UBERON:0001017!2.45e-07!82;UBERON:0001893!2.68e-07!34;UBERON:0002780!3.54e-07!41;UBERON:0001890!3.54e-07!41;UBERON:0006240!3.54e-07!41;UBERON:0000025!5.15e-07!194;UBERON:0002791!6.40e-07!33;UBERON:0004535!6.99e-07!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.84e-24,108;UBERON:0002390,9.87e-21,98;UBERON:0003061,9.87e-21,98;UBERON:0003081,7.58e-20,203;UBERON:0002405,1.95e-19,93;UBERON:0002371,2.80e-19,76;UBERON:0001474,2.26e-16,82;UBERON:0007023,5.28e-14,114;UBERON:0004765,1.45e-12,90;UBERON:0001434,2.03e-11,100;UBERON:0000926,5.53e-10,315;UBERON:0004120,5.53e-10,315;UBERON:0006603,5.53e-10,315;UBERON:0001049,1.47e-09,56;UBERON:0005068,1.47e-09,56;UBERON:0006241,1.47e-09,56;UBERON:0007135,1.47e-09,56;UBERON:0000073,2.09e-08,53;UBERON:0002616,2.09e-08,53;UBERON:0002204,6.37e-08,167;UBERON:0000955,8.49e-08,68;UBERON:0006238,8.49e-08,68;UBERON:0003528,2.97e-07,34;UBERON:0002020,2.97e-07,34;UBERON:0001893,3.44e-07,34;UBERON:0004535,4.10e-07,109;UBERON:0001017,4.45e-07,81;UBERON:0002780,5.50e-07,41;UBERON:0001890,5.50e-07,41;UBERON:0003080,5.50e-07,41;UBERON:0006240,5.50e-07,41;UBERON:0000025,5.62e-07,192 | |||
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| ||
|short_description=p3@MTMR10 | |||
}} | }} |
Latest revision as of 03:21, 17 September 2015
Short description: | p3@MTMR10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTMR10_5end |
Coexpression cluster: | C3476_Neutrophils_Eosinophils_optic_spinal_Endothelial_CD14_locus |
Association with transcript: | 13bp_to_ENST00000340566, ENST00000425768, ENST00000435680, NM_017762, uc001zfh.1, uc001zfi.1, uc001zfk.2, uc010azx.1_5end |
EntrezGene: | MTMR10 |
HGNC: | 25999 |
UniProt: | A6NGL9Q9NXD2Q0IJ45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.08e-30 | 72 |
defensive cell | 4.71e-27 | 48 |
phagocyte | 4.71e-27 | 48 |
macrophage dendritic cell progenitor | 5.99e-26 | 61 |
granulocyte monocyte progenitor cell | 1.86e-25 | 67 |
monopoietic cell | 4.43e-25 | 59 |
monocyte | 4.43e-25 | 59 |
monoblast | 4.43e-25 | 59 |
promonocyte | 4.43e-25 | 59 |
classical monocyte | 5.27e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.27e-25 | 42 |
myeloid lineage restricted progenitor cell | 1.51e-24 | 66 |
myeloid cell | 1.01e-15 | 108 |
common myeloid progenitor | 1.01e-15 | 108 |
leukocyte | 1.90e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.13e-09 | 120 |
nongranular leukocyte | 1.07e-08 | 115 |
hematopoietic stem cell | 7.52e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.84e-24 | 108 |
hematopoietic system | 9.87e-21 | 98 |
blood island | 9.87e-21 | 98 |
lateral plate mesoderm | 7.58e-20 | 203 |
immune system | 1.95e-19 | 93 |
bone marrow | 2.80e-19 | 76 |
bone element | 2.26e-16 | 82 |
adult organism | 5.28e-14 | 114 |
skeletal element | 1.45e-12 | 90 |
skeletal system | 2.03e-11 | 100 |
mesoderm | 5.53e-10 | 315 |
mesoderm-derived structure | 5.53e-10 | 315 |
presumptive mesoderm | 5.53e-10 | 315 |
neural tube | 1.47e-09 | 56 |
neural rod | 1.47e-09 | 56 |
future spinal cord | 1.47e-09 | 56 |
neural keel | 1.47e-09 | 56 |
regional part of nervous system | 2.09e-08 | 53 |
regional part of brain | 2.09e-08 | 53 |
musculoskeletal system | 6.37e-08 | 167 |
brain | 8.49e-08 | 68 |
future brain | 8.49e-08 | 68 |
brain grey matter | 2.97e-07 | 34 |
gray matter | 2.97e-07 | 34 |
telencephalon | 3.44e-07 | 34 |
cardiovascular system | 4.10e-07 | 109 |
central nervous system | 4.45e-07 | 81 |
regional part of forebrain | 5.50e-07 | 41 |
forebrain | 5.50e-07 | 41 |
anterior neural tube | 5.50e-07 | 41 |
future forebrain | 5.50e-07 | 41 |
tube | 5.62e-07 | 192 |