FFCP PHASE1:Hg19::chr15:31619407..31619419,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:31619407..31619419,+ to FFCP PHASE1:Hg19::chr15:31619407..31619419,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51621 | |EntrezGene=51621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13672 | |HGNC=13672 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2Y9 | |UniProt=Q9Y2Y9 | ||
|association_with_transcript=324bp_to_NM_015995,uc001zfo.2_5end | |||
|cluster_id=chr15:31619407..31619419,+ | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_9_at_KLF13_5end | |||
|id=chr15:31619407..31619419,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.92e-19!140;CL:0002031!2.62e-16!124;CL:0002087!7.77e-15!119;CL:0000037!3.63e-13!172;CL:0000566!3.63e-13!172;CL:0002032!1.54e-11!165;CL:0000837!1.54e-11!165;CL:0000988!1.61e-11!182;CL:0000766!4.00e-11!76;CL:0002057!2.16e-10!42;CL:0000557!7.05e-10!71;CL:0000860!8.40e-10!45;CL:0000839!1.48e-09!70;CL:0002009!1.15e-08!65;CL:0000791!2.23e-08!18;CL:0000789!2.23e-08!18;CL:0002420!2.23e-08!18;CL:0002419!2.23e-08!18;CL:0000790!2.23e-08!18;CL:0002194!5.50e-08!63;CL:0000576!5.50e-08!63;CL:0000040!5.50e-08!63;CL:0000559!5.50e-08!63;CL:0000838!9.75e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.29e-13;18!CL:0000789;2.29e-13;18!CL:0002419;2.29e-13;18!CL:0000084;3.47e-11;25!CL:0000624;5.34e-10;6!CL:0000625;6.30e-07;11!CL:0002087;7.18e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.60e-24,136;CL:0002087,9.52e-20,115;CL:0002031,1.40e-18,120;CL:0000037,5.95e-18,168;CL:0000988,4.77e-16,177;CL:0002032,4.28e-15,161;CL:0000837,4.28e-15,161;CL:0000791,1.09e-13,18;CL:0000789,1.09e-13,18;CL:0002420,1.09e-13,18;CL:0002419,1.09e-13,18;CL:0000790,1.09e-13,18;CL:0000084,2.45e-11,25;CL:0000827,2.45e-11,25;CL:0000766,9.09e-11,72;CL:0000860,1.89e-10,42;CL:0002057,1.89e-10,42;CL:0000624,5.21e-10,6;CL:0000838,6.49e-10,52;CL:0000542,1.36e-09,53;CL:0000051,1.36e-09,53;CL:0002009,1.42e-09,61;CL:0000473,2.41e-09,48;CL:0000234,2.41e-09,48;CL:0000557,9.29e-09,67;CL:0002194,1.90e-08,59;CL:0000576,1.90e-08,59;CL:0000040,1.90e-08,59;CL:0000559,1.90e-08,59;CL:0000839,2.87e-08,66;CL:0000625,3.33e-07,11;CL:0000763,6.54e-07,108;CL:0000049,6.54e-07,108;CL:0000094,9.76e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.29e-13;18!CL:0002057;3.92e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.99e-14!115;UBERON:0001049!6.12e-10!57;UBERON:0005068!6.12e-10!57;UBERON:0006241!6.12e-10!57;UBERON:0007135!6.12e-10!57;UBERON:0002390!2.16e-09!102;UBERON:0003061!2.16e-09!102;UBERON:0002616!3.53e-09!59;UBERON:0002193!1.43e-08!112;UBERON:0001893!8.21e-08!34;UBERON:0002780!9.17e-08!41;UBERON:0001890!9.17e-08!41;UBERON:0006240!9.17e-08!41;UBERON:0002020!1.31e-07!34;UBERON:0003528!1.31e-07!34;UBERON:0002791!2.01e-07!33;UBERON:0003080!3.10e-07!42;UBERON:0001869!7.53e-07!32;UBERON:0002371!7.62e-07!80;UBERON:0000955!8.57e-07!69;UBERON:0006238!8.57e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.54e-10,53;UBERON:0002616,6.54e-10,53;UBERON:0002390,8.78e-10,98;UBERON:0003061,8.78e-10,98;UBERON:0001049,5.27e-09,56;UBERON:0005068,5.27e-09,56;UBERON:0006241,5.27e-09,56;UBERON:0007135,5.27e-09,56;UBERON:0002193,6.06e-08,108;UBERON:0001893,1.38e-07,34;UBERON:0002780,2.43e-07,41;UBERON:0001890,2.43e-07,41;UBERON:0003080,2.43e-07,41;UBERON:0006240,2.43e-07,41;UBERON:0003528,2.69e-07,34;UBERON:0002020,2.69e-07,34;UBERON:0007023,6.41e-07,114;UBERON:0002371,7.54e-07,76;UBERON:0000955,9.41e-07,68;UBERON:0006238,9.41e-07,68 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.655324116390517,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.152826811495903,0.164201178899891,0,4.72037132218685,7.67658796194425,4.79929982279836,0,0,1.10926203050036,0,0.710846162437108,0,3.87796785972314,5.01361118675354,4.55722828503289,0.447830948479849,1.29557466407592,0,2.76256653681173,5.29026321164333,2.91100873425379,2.09186133215116,0,0.929119112685311,1.1507695692886,1.2808035326455,0.945928919554341,0.689491361473237,2.5819387343353,4.06279459783025,0.941211697713023,1.36453075028923,1.12361742222542,0.612167784741805,0.320929027076094,0.639337125799041,2.63881040149373,0.797854630486527,1.70489900213078,0,1.13477044938228,0,1.50749199154046,3.12889751052121,0.868755378820466,0,0.736555271975129,0.316462387440884,2.11255286311942,1.91343869968539,0,1.34794357375794,0.901061357049038,1.28580469357664,0.570025487482497,1.39241674039363,0.547992461293902,5.27988733383968,0,0.889509253863555,0.426730222566507,0.800791974072025,0,3.30522436392431,0,1.1384259382189,5.87237189370939,3.44045905312706,1.32171328579026,1.68152568894461,0,6.68813218387032,10.2182798314783,9.86887195197644,1.83905144929746,5.54067853277104,2.8406868344084,5.84480185223734,1.00269411196656,3.82987679717288,2.65840673500345,3.24964636518019,2.17755243533648,1.69077151827842,0.986627427622057,1.38175008892924,2.31842468588042,6.22803565280654,3.74557159325598,2.09071047609954,2.37949619664889,5.74830740402882,3.4362744548263,4.80737414837055,0.637130828648193,0,1.90090408889675,1.95747654801105,1.02389288923535,2.49861453104692,1.65744076430812,0.821127996921047,11.289977620585,10.9650480271238,8.39981542520234,0,0,0,0.722878304769133,0.50133791063589,0,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.916853528483988,0.728590576585084,0.741568885568859,0,0.696518949197069,1.06366368415092,4.5313218618015,1.71598473234038,2.22874500797739,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.549605231791222,2.63560834872127,3.87780264148325,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0.74000264525148,0,0.404132016209064,0.326923806226917,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0.45071417671979,0,0,0.213557388818567,0,0,0,0.515281080091258,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0.243947412259191,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0.842923450390509,0.723033089650446,0.55146986366197,0.217879444092406,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.614942192715568,0.171567810298526,2.19500570817251,1.1240175325762,0.502644862058154,0.648119116109707,0.977424915930974,0,0,0.115930404975077,0,0,0,0,0,0,0.738651018262192,0.468008530278475,0.891786973732369,0,0.839910640994298,0.850650583454319,0.358234090811393,0.290633938513962,0.766765358330422,0.985326475791887,0.528290604079356,0.829312462163088,0.720599767084807,0.6312121671319,0.761974731506028,0.763976851116555,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0.112131084345361,0,0.07333828582095,0.387815147273333,3.57656445851882,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.537182889719687,0.112085143993527,11.6248148519137,10.3501235932568,6.93052395910641,1.01637849688985,0,1.54657762555539,0.502548796003046,0,2.99602809578873,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,2.0694614258501,0,0,0.0868836144680828,0.587403472388222,0.343143423810856,7.65041696654683,4.31428401637234,8.21802195086521,0.606255142892519,0,0,0.496215615637554,0.920771839728375,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.532685175939381,0.0821271560138091,0,0,0.604297247958111,0.601519410909855,1.19705285616665,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,1.31555925987561,1.8300481571743,0,0.328014645699706,0.650756789328606,0.412164046590889,0.27470839445503,0.41254749960294,3.44559322797703,0.650060246036521,0,0.290012154876366,0,0.307007349452259,0,0.214840489736547,0.290033387828457,0,0.267096106940212,1.32227932288782,1.92190067365106,0.255225424989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|phase1_expression=1.09007027562334,1.07050261945492,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.655324116390517,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.136874425072884,0.125542639594803,0.152826811495903,0.164201178899891,0,4.72037132218685,7.67658796194425,4.79929982279836,0,0,1.10926203050036,0,0.710846162437108,0,3.87796785972314,5.01361118675354,4.55722828503289,0.447830948479849,1.29557466407592,0,2.76256653681173,5.29026321164333,2.91100873425379,2.09186133215116,0,0.929119112685311,1.1507695692886,1.2808035326455,0.945928919554341,0.689491361473237,2.5819387343353,4.06279459783025,0.941211697713023,1.36453075028923,1.12361742222542,0.612167784741805,0.320929027076094,0.639337125799041,2.63881040149373,0.797854630486527,1.70489900213078,0,1.13477044938228,0,1.50749199154046,3.12889751052121,0.868755378820466,0,0.736555271975129,0.316462387440884,2.11255286311942,1.91343869968539,0,1.34794357375794,0.901061357049038,1.28580469357664,0.570025487482497,1.39241674039363,0.547992461293902,5.27988733383968,0,0.889509253863555,0.426730222566507,0.800791974072025,0,3.30522436392431,0,1.1384259382189,5.87237189370939,3.44045905312706,1.32171328579026,1.68152568894461,0,6.68813218387032,10.2182798314783,9.86887195197644,1.83905144929746,5.54067853277104,2.8406868344084,5.84480185223734,1.00269411196656,3.82987679717288,2.65840673500345,3.24964636518019,2.17755243533648,1.69077151827842,0.986627427622057,1.38175008892924,2.31842468588042,6.22803565280654,3.74557159325598,2.09071047609954,2.37949619664889,5.74830740402882,3.4362744548263,4.80737414837055,0.637130828648193,0,1.90090408889675,1.95747654801105,1.02389288923535,2.49861453104692,1.65744076430812,0.821127996921047,11.289977620585,10.9650480271238,8.39981542520234,0,0,0,0.722878304769133,0.50133791063589,0,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.916853528483988,0.728590576585084,0.741568885568859,0,0.696518949197069,1.06366368415092,4.5313218618015,1.71598473234038,2.22874500797739,0.198762407366705,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0.549605231791222,2.63560834872127,3.87780264148325,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0.74000264525148,0,0.404132016209064,0.326923806226917,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0.718618141816238,0,0,0,0.438977620880838,0,0.45071417671979,0,0,0.213557388818567,0,0,0,0.515281080091258,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0.243947412259191,0,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0.842923450390509,0.723033089650446,0.55146986366197,0.217879444092406,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.614942192715568,0.171567810298526,2.19500570817251,1.1240175325762,0.502644862058154,0.648119116109707,0.977424915930974,0,0,0.115930404975077,0,0,0,0,0,0,0.738651018262192,0.468008530278475,0.891786973732369,0,0.839910640994298,0.850650583454319,0.358234090811393,0.290633938513962,0.766765358330422,0.985326475791887,0.528290604079356,0.829312462163088,0.720599767084807,0.6312121671319,0.761974731506028,0.763976851116555,1.17217447210047,0,0.102827492703324,0.300343057843917,0.571652865261156,0.112131084345361,0,0.07333828582095,0.387815147273333,3.57656445851882,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.537182889719687,0.112085143993527,11.6248148519137,10.3501235932568,6.93052395910641,1.01637849688985,0,1.54657762555539,0.502548796003046,0,2.99602809578873,0,0.414415513436035,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,2.0694614258501,0,0,0.0868836144680828,0.587403472388222,0.343143423810856,7.65041696654683,4.31428401637234,8.21802195086521,0.606255142892519,0,0,0.496215615637554,0.920771839728375,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0.532685175939381,0.0821271560138091,0,0,0.604297247958111,0.601519410909855,1.19705285616665,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,1.31555925987561,1.8300481571743,0,0.328014645699706,0.650756789328606,0.412164046590889,0.27470839445503,0.41254749960294,3.44559322797703,0.650060246036521,0,0.290012154876366,0,0.307007349452259,0,0.214840489736547,0.290033387828457,0,0.267096106940212,1.32227932288782,1.92190067365106,0.255225424989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| ||
|short_description=p9@KLF13 | |||
}} | }} |
Latest revision as of 03:44, 17 September 2015
Short description: | p9@KLF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KLF13_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 324bp_to_NM_015995, uc001zfo.2_5end |
EntrezGene: | KLF13 |
HGNC: | 13672 |
UniProt: | Q9Y2Y9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.54e-10 | 53 |
regional part of brain | 6.54e-10 | 53 |
hematopoietic system | 8.78e-10 | 98 |
blood island | 8.78e-10 | 98 |
neural tube | 5.27e-09 | 56 |
neural rod | 5.27e-09 | 56 |
future spinal cord | 5.27e-09 | 56 |
neural keel | 5.27e-09 | 56 |
hemolymphoid system | 6.06e-08 | 108 |
telencephalon | 1.38e-07 | 34 |
regional part of forebrain | 2.43e-07 | 41 |
forebrain | 2.43e-07 | 41 |
anterior neural tube | 2.43e-07 | 41 |
future forebrain | 2.43e-07 | 41 |
brain grey matter | 2.69e-07 | 34 |
gray matter | 2.69e-07 | 34 |
adult organism | 6.41e-07 | 114 |
bone marrow | 7.54e-07 | 76 |
brain | 9.41e-07 | 68 |
future brain | 9.41e-07 | 68 |