FFCP PHASE1:Hg19::chr2:139259462..139259510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339745 | |EntrezGene=339745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27934 | |HGNC=27934 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBB7 | |UniProt=F8WBB7 | ||
|association_with_transcript=0bp_to_ENST00000430968_5end | |association_with_transcript=0bp_to_ENST00000430968_5end | ||
|cluster_id=chr2:139259462..139259510,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_SPOPL_5end | |description=CAGE_peak_2_at_SPOPL_5end | ||
|id=chr2:139259462..139259510,+ | |id=chr2:139259462..139259510,+ | ||
|ontology_enrichment_celltype=CL:0000766!3.61e-27!76;CL:0002057!2.89e-24!42;CL:0000860!5.17e-24!45;CL:0000557!6.75e-24!71;CL:0002009!1.37e-21!65;CL:0000839!2.12e-21!70;CL:0002194!8.04e-21!63;CL:0000576!8.04e-21!63;CL:0000040!8.04e-21!63;CL:0000559!8.04e-21!63;CL:0000738!2.38e-14!140;CL:0000763!2.84e-12!112;CL:0000049!2.84e-12!112;CL:0002031!3.77e-11!124;CL:0002087!3.22e-10!119;CL:0000037!1.14e-07!172;CL:0000566!1.14e-07!172;CL:0002032!7.94e-07!165;CL:0000837!7.94e-07!165 | |ontology_enrichment_celltype=CL:0000766!3.61e-27!76;CL:0002057!2.89e-24!42;CL:0000860!5.17e-24!45;CL:0000557!6.75e-24!71;CL:0002009!1.37e-21!65;CL:0000839!2.12e-21!70;CL:0002194!8.04e-21!63;CL:0000576!8.04e-21!63;CL:0000040!8.04e-21!63;CL:0000559!8.04e-21!63;CL:0000738!2.38e-14!140;CL:0000763!2.84e-12!112;CL:0000049!2.84e-12!112;CL:0002031!3.77e-11!124;CL:0002087!3.22e-10!119;CL:0000037!1.14e-07!172;CL:0000566!1.14e-07!172;CL:0002032!7.94e-07!165;CL:0000837!7.94e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.61e-22;33!CL:0002057;1.61e-22;33!CL:0000473;1.47e-17;39!CL:0000234;1.47e-17;39!CL:0000576;1.94e-17;48!CL:0000766;3.08e-15;69!CL:0000094;2.67e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.48e-32,72;CL:0000860,1.71e-29,42;CL:0002057,1.71e-29,42;CL:0000557,2.71e-28,67;CL:0000473,2.25e-27,48;CL:0000234,2.25e-27,48;CL:0002009,1.84e-25,61;CL:0000839,5.37e-25,66;CL:0002194,1.61e-24,59;CL:0000576,1.61e-24,59;CL:0000040,1.61e-24,59;CL:0000559,1.61e-24,59;CL:0000738,1.58e-17,136;CL:0000763,4.73e-16,108;CL:0000049,4.73e-16,108;CL:0002031,1.01e-12,120;CL:0002087,6.39e-12,115;CL:0000037,4.05e-10,168;CL:0002032,4.54e-09,161;CL:0000837,4.54e-09,161;CL:0000988,3.13e-08,177;CL:0000094,3.01e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.17e-22!102;UBERON:0003061!2.17e-22!102;UBERON:0002193!3.20e-20!112;UBERON:0002371!1.70e-18!80;UBERON:0001474!5.49e-16!86;UBERON:0002405!6.00e-15!115;UBERON:0004765!6.64e-14!101;UBERON:0001434!6.64e-14!101;UBERON:0007023!6.68e-09!115;UBERON:0000062!1.04e-07!511;UBERON:0000468!4.69e-07!659 | |ontology_enrichment_uberon=UBERON:0002390!2.17e-22!102;UBERON:0003061!2.17e-22!102;UBERON:0002193!3.20e-20!112;UBERON:0002371!1.70e-18!80;UBERON:0001474!5.49e-16!86;UBERON:0002405!6.00e-15!115;UBERON:0004765!6.64e-14!101;UBERON:0001434!6.64e-14!101;UBERON:0007023!6.68e-09!115;UBERON:0000062!1.04e-07!511;UBERON:0000468!4.69e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.55e-07;15!UBERON:0000179;7.55e-07;15!UBERON:0000463;7.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.61e-27,98;UBERON:0003061,1.61e-27,98;UBERON:0002193,7.68e-24,108;UBERON:0002371,1.04e-22,76;UBERON:0004765,3.53e-19,90;UBERON:0001474,4.26e-19,82;UBERON:0002405,2.21e-18,93;UBERON:0001434,8.75e-16,100;UBERON:0007023,5.62e-10,114;UBERON:0000178,9.22e-07,15;UBERON:0000179,9.22e-07,15;UBERON:0000463,9.22e-07,15 | |||
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| ||
|short_description=p2@SPOPL | |short_description=p2@SPOPL | ||
}} | }} |
Latest revision as of 04:08, 17 September 2015
Short description: | p2@SPOPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPOPL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000430968_5end |
EntrezGene: | SPOPL |
HGNC: | 27934 |
UniProt: | F8WBB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.48e-32 | 72 |
classical monocyte | 1.71e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.71e-29 | 42 |
granulocyte monocyte progenitor cell | 2.71e-28 | 67 |
defensive cell | 2.25e-27 | 48 |
phagocyte | 2.25e-27 | 48 |
macrophage dendritic cell progenitor | 1.84e-25 | 61 |
myeloid lineage restricted progenitor cell | 5.37e-25 | 66 |
monopoietic cell | 1.61e-24 | 59 |
monocyte | 1.61e-24 | 59 |
monoblast | 1.61e-24 | 59 |
promonocyte | 1.61e-24 | 59 |
leukocyte | 1.58e-17 | 136 |
myeloid cell | 4.73e-16 | 108 |
common myeloid progenitor | 4.73e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 1.01e-12 | 120 |
nongranular leukocyte | 6.39e-12 | 115 |
hematopoietic stem cell | 4.05e-10 | 168 |
hematopoietic oligopotent progenitor cell | 4.54e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.54e-09 | 161 |
hematopoietic cell | 3.13e-08 | 177 |
granulocyte | 3.01e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.61e-27 | 98 |
blood island | 1.61e-27 | 98 |
hemolymphoid system | 7.68e-24 | 108 |
bone marrow | 1.04e-22 | 76 |
skeletal element | 3.53e-19 | 90 |
bone element | 4.26e-19 | 82 |
immune system | 2.21e-18 | 93 |
skeletal system | 8.75e-16 | 100 |
adult organism | 5.62e-10 | 114 |
blood | 9.22e-07 | 15 |
haemolymphatic fluid | 9.22e-07 | 15 |
organism substance | 9.22e-07 | 15 |