FFCP PHASE1:Hg19::chr16:66638685..66638696,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=123920 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19174 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=51bp_to_NR_037619,uc002epy.2_5end | |||
|cluster_id=chr16:66638685..66638696,+ | |||
|description=CAGE_peak_6_at_CMTM3_5end | |||
|id=chr16:66638685..66638696,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.79e-16!35;CL:0002139!2.41e-15!24;CL:0002078!1.32e-13!44;CL:0000071!2.46e-11!18;CL:0002546!2.46e-11!18;CL:0000213!2.16e-08!57;CL:0000215!2.16e-08!57;CL:0000763!2.31e-07!112;CL:0000049!2.31e-07!112;CL:0002371!5.20e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.47e-27;24!CL:0000115;3.17e-27;36!CL:0002078;4.39e-18;45!CL:0000071;5.02e-16;18!CL:0002138;1.49e-14;6!CL:0000213;2.66e-12;58!CL:0000215;2.66e-12;58!CL:0002543;5.36e-10;6!CL:1000449;9.89e-09;15!CL:1000746;1.95e-08;7!CL:1000612;1.95e-08;7!CL:0002144;4.88e-08;3!CL:0002188;7.82e-08;5!CL:1000497;1.58e-07;17!CL:0002518;1.58e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.97e-35,36;CL:0002078,6.90e-29,45;CL:0002139,5.14e-28,24;CL:0000213,6.88e-19,58;CL:0000215,6.88e-19,58;CL:0000071,1.51e-16,18;CL:0002546,1.51e-16,18;CL:0005020,2.40e-14,6;CL:0002138,2.40e-14,6;CL:0005022,2.40e-14,6;CL:0002543,5.29e-10,6;CL:1000449,6.17e-09,15;CL:1000746,1.87e-08,7;CL:1000612,1.87e-08,7;CL:0002144,3.25e-08,3;CL:0002188,6.18e-08,5;CL:0000222,8.87e-08,121;CL:1000497,1.05e-07,17;CL:0002518,1.05e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;5.02e-16;18!CL:0005022;1.49e-14;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.25e-12!216;UBERON:0001986!2.46e-11!18;UBERON:0004638!2.46e-11!18;UBERON:0004852!2.46e-11!18;UBERON:0000487!1.39e-10!22;UBERON:0002049!3.26e-10!79;UBERON:0007798!3.26e-10!79;UBERON:0006914!4.19e-10!25;UBERON:0000055!8.18e-10!69;UBERON:0003914!4.43e-09!118;UBERON:0004535!1.22e-08!110;UBERON:0001981!5.72e-08!60;UBERON:0007500!5.72e-08!60;UBERON:0004537!5.72e-08!60;UBERON:0006965!5.72e-08!60;UBERON:0001009!9.10e-08!113;UBERON:0004872!1.14e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.02e-16;18!UBERON:0001986;5.02e-16;18!UBERON:0004852;5.02e-16;18!UBERON:0000487;1.43e-12;22!UBERON:0006914;1.03e-10;25!UBERON:0001473;1.09e-10;8!UBERON:0004536;1.09e-10;8!UBERON:0006558;1.09e-10;8!UBERON:0000353;5.34e-09;15!UBERON:0001638;5.77e-09;9!UBERON:0003920;5.77e-09;9!UBERON:0004582;5.77e-09;9!UBERON:0006555;9.89e-09;15!UBERON:0004819;9.89e-09;15!UBERON:0001285;9.89e-09;15!UBERON:0007684;9.89e-09;15!UBERON:0000074;1.95e-08;7!UBERON:0001229;1.95e-08;7!UBERON:0002465;2.27e-08;10!UBERON:0010523;4.88e-08;3!UBERON:0001915;4.88e-08;3!UBERON:0001982;4.88e-08;3!UBERON:0000490;6.47e-08;33!UBERON:0000055;3.12e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.51e-16,18;UBERON:0001986,1.51e-16,18;UBERON:0004852,1.51e-16,18;UBERON:0002049,2.28e-13,78;UBERON:0007798,2.28e-13,78;UBERON:0000487,5.53e-13,22;UBERON:0000055,3.01e-12,68;UBERON:0006914,4.55e-11,25;UBERON:0001473,1.55e-10,8;UBERON:0004536,1.55e-10,8;UBERON:0006558,1.55e-10,8;UBERON:0003081,2.12e-10,203;UBERON:0004535,3.66e-10,109;UBERON:0001009,1.08e-09,112;UBERON:0000353,3.84e-09,15;UBERON:0004211,6.17e-09,15;UBERON:0009773,6.17e-09,15;UBERON:0001231,6.17e-09,15;UBERON:0001285,6.17e-09,15;UBERON:0007684,6.17e-09,15;UBERON:0004208,6.17e-09,15;UBERON:0001638,8.32e-09,9;UBERON:0003920,8.32e-09,9;UBERON:0004582,8.32e-09,9;UBERON:0010532,1.87e-08,7;UBERON:0000074,1.87e-08,7;UBERON:0001229,1.87e-08,7;UBERON:0001230,1.87e-08,7;UBERON:0003220,1.87e-08,7;UBERON:0005749,1.87e-08,7;UBERON:0004199,1.87e-08,7;UBERON:0004209,1.87e-08,7;UBERON:0004198,1.87e-08,7;UBERON:0006555,2.79e-08,16;UBERON:0004819,2.79e-08,16;UBERON:0002465,2.97e-08,10;UBERON:0010523,3.25e-08,3;UBERON:0001915,3.25e-08,3;UBERON:0001982,3.25e-08,3;UBERON:0003914,4.23e-08,117;UBERON:0005103,2.45e-07,8;UBERON:0000083,2.45e-07,8;UBERON:0009201,2.45e-07,8;UBERON:0006553,2.45e-07,8;UBERON:0003074,2.45e-07,8;UBERON:0003060,2.45e-07,8;UBERON:0007500,2.83e-07,59;UBERON:0001981,2.83e-07,59;UBERON:0004537,2.83e-07,59;UBERON:0006965,2.83e-07,59;UBERON:0004872,7.55e-07,83 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0.872338524100369,0,1.26343974685366,1.30592814099919,0.491467873003018,1.39560233594486,0.655324116390517,1.05506791291381,0.495065411840187,0.331397375727916,0.672325146451775,0.602694528023977,1.46062018077475,1.95173119516203,0.369363174230364,0.816002764977012,0,0.286235987131057,0.547497700291537,0.251085279189606,0.229240217243854,0.246301768349837,0.472264687882075,1.57345710739562,0.767658796194425,1.08371286321253,0,0.30120591877825,0,0,0,2.64240395401362,0.553995408531877,0.401088894940283,1.08505435357926,0.223915474239924,0,0,2.18097358169347,2.26725566213286,0.485168122375632,1.16214518452842,0.822335776043652,0,1.1507695692886,0.512321413058201,0.47296445977717,0.689491361473237,0,0,2.44715041405386,1.36453075028923,0.898893937780338,0.306083892370903,0.641858054152187,0.639337125799041,0.329851300186716,1.79517291859469,0,0.870627715885752,0.56738522469114,0,1.00499466102697,0,0.868755378820466,0,0,0,0.211255286311942,0.850417199860174,0.419317291016752,0.561643155732475,1.20141514273205,0.32145117339416,0,0,0.91332076882317,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,3.96513985737078,0.560508562981536,0.526768169550154,0,0,0.411202997999018,1.33749196312542,0,0.473447805734733,0,0.891283655081389,0.294605907474837,0.443067789167242,0.270803863765016,0.896639238079726,1.30059347559878,0.822189523018381,1.10540007114339,0.289803085735052,0.296573126324121,0.535081656179426,0,1.0197840842781,0,1.03088233644789,0.253019692019503,0.637130828648193,0,0,0,0.255973222308837,1.24930726552346,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0.670700859703636,0,0,0,0.289693037921647,0.795285947051099,0,0.283604451492204,3.1042115644759,0.87834785693126,0.0654895377488563,0.364295288292542,0,0.649094787309367,0.696518949197069,0.664789802594326,0.715471872916026,0.571994910780128,0.371457501329565,0.993812036833525,0.860234595106124,1.38856200643038,1.69592382577203,1.67799774483962,0.825354125820202,1.25396979922086,2.32575083252396,2.84613010149368,1.00416183829401,2.41697590265488,1.52054421143703,8.05404789908959,0.367663080345869,0.81014194788176,0.803697554556718,1.57170560838319,1.12611480483322,3.06633274931766,3.79706263827252,2.19842092716489,0,0,0,0,0.506522046658319,0,0.286836620748814,0.354668382198357,1.12135520028461,0,1.48000529050296,0.311211035399766,0.67355336034844,0.817309515567294,0.605429710579726,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0,0.245668634623536,0,2.37600571456411,0.989067717114227,0,0,0,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.567160915800105,0,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0,0.646584227275248,0,0,0,0,0,0.860413786167011,0.487894824518382,0,0.116193942869518,0.207322110030741,0.756962552626885,0,0,0,0,0.464367928031979,0,0,0,0,0,0.217879444092406,0,0,0,0,3.69077727312324,2.80483547606892,0.4115740113314,0,0,0,0,0,0.245976877086227,1.71567810298526,0.219500570817251,0,0.100528972411631,0,0,0,0,0.115930404975077,1.29149563659404,2.45422961193825,3.24089858803628,2.47330397904978,0,0,0.492434012174795,0.468008530278475,1.33768046059855,0,0,0,0.0895585227028483,0,0,0,1.49682337822484,0.829312462163088,0.864719720501769,1.00993946741104,0.126995788584338,0,0,0,0.205654985406647,0,0,0.336393253036082,0.43596006883328,0.2933531432838,1.03417372606222,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,0,0.699810938274399,1.2162378064119,1.00451418286425,0,0,0,0,0,0.205476322550383,0.358121926479791,0.784596007954691,0.394061520403854,0.862510299438069,0.256686072559497,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0.24538298343828,1.00034104211935,0.271265023699736,0.415941723061614,0,0,0.234282829985426,0.300946099727719,6.82222512167955,0,0,0,0.173767228936166,0.391602314925481,0.686286847621712,0.620304078368662,0.431428401637234,0.74709290462411,0,1.66435439510497,0.30239029332968,0.248107807818777,0,0.841980283299221,0.128139149255701,0,0.321707842287215,0,0.616838775210622,0,0.246381468041427,0,0.348631135379878,0.120859449591622,1.20303882181971,0.0920809889358963,0.229628896329213,0.182091168006717,0.655622074797121,0.451199612907412,0.924184045252977,0.784349769176855,1.46139224653261,2.74434235121477,2.27466768141793,0.850468526382578,1.29549549661284,7.71136263451447,0.541892875087706,2.00675909541941,0.254876273045038,0,1.56712328305525,0,0,0.512900250232778,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0.386682873168488,0,0,0.275673144969061,0.537101224341368,0.145016693914229,0.170453254832202,0.356128142586949,0.826424576804891,0.384380134730212,0,0,0.464845549297286,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0.636406495851874,0,0.359744915166629,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.487426979262569,0,0.409499734223957,0.14140543195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| |||
|short_description=p6@CMTM3 | |||
}} |
Latest revision as of 08:47, 17 September 2015
Short description: | p6@CMTM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CMTM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_NR_037619, uc002epy.2_5end |
EntrezGene: | CMTM3 |
HGNC: | 19174 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.97e-35 | 36 |
meso-epithelial cell | 6.90e-29 | 45 |
endothelial cell of vascular tree | 5.14e-28 | 24 |
lining cell | 6.88e-19 | 58 |
barrier cell | 6.88e-19 | 58 |
blood vessel endothelial cell | 1.51e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.51e-16 | 18 |
lymphangioblast | 2.40e-14 | 6 |
endothelial cell of lymphatic vessel | 2.40e-14 | 6 |
vascular lymphangioblast | 2.40e-14 | 6 |
vein endothelial cell | 5.29e-10 | 6 |
epithelial cell of nephron | 6.17e-09 | 15 |
glomerular cell | 1.87e-08 | 7 |
kidney corpuscule cell | 1.87e-08 | 7 |
capillary endothelial cell | 3.25e-08 | 3 |
glomerular endothelial cell | 6.18e-08 | 5 |
mesodermal cell | 8.87e-08 | 121 |
kidney cell | 1.05e-07 | 17 |
kidney epithelial cell | 1.05e-07 | 17 |