FFCP PHASE1:Hg19::chr1:28477178..28477206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt=P25105 | |UniProt=P25105 | ||
|association_with_transcript=325bp_to_AB464653,AY275466,BT009801,CU687620,DQ891716,DQ894893,EU832802,GQ129382,L07334_5end | |association_with_transcript=325bp_to_AB464653,AY275466,BT009801,CU687620,DQ891716,DQ894893,EU832802,GQ129382,L07334_5end | ||
|cluster_id=chr1:28477178..28477206,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_9_at_PTAFR_5end | |description=CAGE_peak_9_at_PTAFR_5end | ||
|id=chr1:28477178..28477206,- | |id=chr1:28477178..28477206,- | ||
|ontology_enrichment_celltype=CL:0000766!2.70e-56!76;CL:0002057!3.24e-49!42;CL:0002194!4.91e-47!63;CL:0000576!4.91e-47!63;CL:0000040!4.91e-47!63;CL:0000559!4.91e-47!63;CL:0000839!3.87e-46!70;CL:0000557!3.11e-45!71;CL:0002009!4.64e-45!65;CL:0000860!6.14e-45!45;CL:0000763!9.23e-40!112;CL:0000049!9.23e-40!112;CL:0000738!1.45e-34!140;CL:0002087!7.44e-30!119;CL:0002032!8.31e-30!165;CL:0000837!8.31e-30!165;CL:0000037!8.67e-30!172;CL:0000566!8.67e-30!172;CL:0002031!7.13e-29!124;CL:0000988!7.68e-27!182;CL:0000094!2.70e-09!8 | |ontology_enrichment_celltype=CL:0000766!2.70e-56!76;CL:0002057!3.24e-49!42;CL:0002194!4.91e-47!63;CL:0000576!4.91e-47!63;CL:0000040!4.91e-47!63;CL:0000559!4.91e-47!63;CL:0000839!3.87e-46!70;CL:0000557!3.11e-45!71;CL:0002009!4.64e-45!65;CL:0000860!6.14e-45!45;CL:0000763!9.23e-40!112;CL:0000049!9.23e-40!112;CL:0000738!1.45e-34!140;CL:0002087!7.44e-30!119;CL:0002032!8.31e-30!165;CL:0000837!8.31e-30!165;CL:0000037!8.67e-30!172;CL:0000566!8.67e-30!172;CL:0002031!7.13e-29!124;CL:0000988!7.68e-27!182;CL:0000094!2.70e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-78;33!CL:0002057;3.50e-78;33!CL:0000473;2.96e-73;39!CL:0000234;2.96e-73;39!CL:0000576;2.86e-51;48!CL:0000766;8.14e-36;69!CL:0000763;1.30e-19;100!CL:0000775;2.48e-13;3!CL:0000094;7.16e-13;8!CL:0000738;1.64e-12;136!CL:0002087;5.64e-11;104!CL:0000235;8.35e-11;6!CL:0000081;2.82e-09;11!CL:0000771;3.67e-09;2!CL:0000988;3.42e-07;177!CL:0000219;4.47e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.23e-86,72;CL:0000473,5.88e-86,48;CL:0000234,5.88e-86,48;CL:0002194,2.04e-80,59;CL:0000576,2.04e-80,59;CL:0000040,2.04e-80,59;CL:0000559,2.04e-80,59;CL:0002009,1.48e-77,61;CL:0000860,3.29e-76,42;CL:0002057,3.29e-76,42;CL:0000839,3.79e-71,66;CL:0000557,5.59e-70,67;CL:0000763,1.18e-54,108;CL:0000049,1.18e-54,108;CL:0000738,6.08e-44,136;CL:0002087,6.62e-40,115;CL:0002031,6.61e-38,120;CL:0002032,9.31e-36,161;CL:0000837,9.31e-36,161;CL:0000037,6.72e-34,168;CL:0000988,1.01e-31,177;CL:0000775,1.98e-13,3;CL:0000094,5.51e-13,8;CL:0000134,2.48e-11,354;CL:0002320,6.17e-11,361;CL:0000235,9.90e-11,6;CL:0000219,1.53e-09,386;CL:0000081,2.34e-09,11;CL:0000771,2.99e-09,2;CL:0000048,7.72e-08,427;CL:0000723,1.32e-07,433;CL:0000034,2.66e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-58;42!CL:0000049;1.46e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.21e-44!102;UBERON:0003061!2.21e-44!102;UBERON:0002193!5.16e-40!112;UBERON:0002371!4.00e-38!80;UBERON:0001474!3.18e-34!86;UBERON:0004765!3.99e-29!101;UBERON:0001434!3.99e-29!101;UBERON:0002405!2.63e-25!115;UBERON:0003081!3.04e-14!216;UBERON:0002204!4.35e-11!167;UBERON:0000178!1.31e-08!15;UBERON:0000179!1.31e-08!15;UBERON:0000463!1.31e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!2.21e-44!102;UBERON:0003061!2.21e-44!102;UBERON:0002193!5.16e-40!112;UBERON:0002371!4.00e-38!80;UBERON:0001474!3.18e-34!86;UBERON:0004765!3.99e-29!101;UBERON:0001434!3.99e-29!101;UBERON:0002405!2.63e-25!115;UBERON:0003081!3.04e-14!216;UBERON:0002204!4.35e-11!167;UBERON:0000178!1.31e-08!15;UBERON:0000179!1.31e-08!15;UBERON:0000463!1.31e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.84e-12;15!UBERON:0000179;2.84e-12;15!UBERON:0000463;2.84e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.91e-67,98;UBERON:0003061,1.91e-67,98;UBERON:0002371,7.92e-61,76;UBERON:0002193,2.01e-60,108;UBERON:0001474,7.90e-56,82;UBERON:0004765,3.45e-50,90;UBERON:0002405,2.55e-48,93;UBERON:0001434,2.15e-44,100;UBERON:0003081,5.21e-28,203;UBERON:0002204,2.30e-23,167;UBERON:0000926,8.60e-15,315;UBERON:0004120,8.60e-15,315;UBERON:0006603,8.60e-15,315;UBERON:0000178,2.85e-12,15;UBERON:0000179,2.85e-12,15;UBERON:0000463,2.85e-12,15;UBERON:0002384,2.14e-10,371 | |||
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| ||
|short_description=p9@PTAFR | |short_description=p9@PTAFR | ||
}} | }} |
Latest revision as of 09:45, 17 September 2015
Short description: | p9@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PTAFR_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 325bp_to_AB464653, AY275466, BT009801, CU687620, DQ891716, DQ894893, EU832802, GQ129382, L07334_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.91e-67 | 98 |
blood island | 1.91e-67 | 98 |
bone marrow | 7.92e-61 | 76 |
hemolymphoid system | 2.01e-60 | 108 |
bone element | 7.90e-56 | 82 |
skeletal element | 3.45e-50 | 90 |
immune system | 2.55e-48 | 93 |
skeletal system | 2.15e-44 | 100 |
lateral plate mesoderm | 5.21e-28 | 203 |
musculoskeletal system | 2.30e-23 | 167 |
mesoderm | 8.60e-15 | 315 |
mesoderm-derived structure | 8.60e-15 | 315 |
presumptive mesoderm | 8.60e-15 | 315 |
blood | 2.85e-12 | 15 |
haemolymphatic fluid | 2.85e-12 | 15 |
organism substance | 2.85e-12 | 15 |
connective tissue | 2.14e-10 | 371 |