FFCP PHASE1:Hg19::chr13:46733819..46733832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_CU679665,DQ892935,DQ896184_5end | |association_with_transcript=-22bp_to_CU679665,DQ892935,DQ896184_5end | ||
|cluster_id=chr13:46733819..46733832,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_15_at_LCP1_5end | |description=CAGE_peak_15_at_LCP1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!4.08e-80!172;CL:0000566!4.08e-80!172;CL:0000988!2.05e-76!182;CL:0002032!8.81e-76!165;CL:0000837!8.81e-76!165;CL:0000738!4.43e-73!140;CL:0002087!4.25e-60!119;CL:0002031!2.49e-57!124;CL:0000763!1.08e-46!112;CL:0000049!1.08e-46!112;CL:0000766!1.03e-35!76;CL:0002009!2.37e-34!65;CL:0002194!2.49e-32!63;CL:0000576!2.49e-32!63;CL:0000040!2.49e-32!63;CL:0000559!2.49e-32!63;CL:0000557!3.83e-31!71;CL:0002057!5.48e-31!42;CL:0000839!7.29e-30!70;CL:0000860!5.25e-28!45;CL:0000542!1.87e-24!53;CL:0000051!1.87e-24!53;CL:0000838!1.79e-23!52;CL:0000134!1.58e-21!358;CL:0002320!2.10e-20!365;CL:0000219!5.06e-17!390;CL:0000084!2.20e-13!25;CL:0000827!2.20e-13!25;CL:0000451!2.93e-13!10;CL:0000034!3.57e-12!444;CL:0000048!5.55e-12!430;CL:0000723!9.60e-12!436;CL:0000990!2.05e-11!8;CL:0000945!1.97e-09!24;CL:0000826!1.97e-09!24;CL:0000840!1.92e-08!5;CL:0001029!1.92e-08!5;CL:0000791!1.04e-07!18;CL:0000789!1.04e-07!18;CL:0002420!1.04e-07!18;CL:0002419!1.04e-07!18;CL:0000790!1.04e-07!18;CL:0000094!3.20e-07!8 | |ontology_enrichment_celltype=CL:0000037!4.08e-80!172;CL:0000566!4.08e-80!172;CL:0000988!2.05e-76!182;CL:0002032!8.81e-76!165;CL:0000837!8.81e-76!165;CL:0000738!4.43e-73!140;CL:0002087!4.25e-60!119;CL:0002031!2.49e-57!124;CL:0000763!1.08e-46!112;CL:0000049!1.08e-46!112;CL:0000766!1.03e-35!76;CL:0002009!2.37e-34!65;CL:0002194!2.49e-32!63;CL:0000576!2.49e-32!63;CL:0000040!2.49e-32!63;CL:0000559!2.49e-32!63;CL:0000557!3.83e-31!71;CL:0002057!5.48e-31!42;CL:0000839!7.29e-30!70;CL:0000860!5.25e-28!45;CL:0000542!1.87e-24!53;CL:0000051!1.87e-24!53;CL:0000838!1.79e-23!52;CL:0000134!1.58e-21!358;CL:0002320!2.10e-20!365;CL:0000219!5.06e-17!390;CL:0000084!2.20e-13!25;CL:0000827!2.20e-13!25;CL:0000451!2.93e-13!10;CL:0000034!3.57e-12!444;CL:0000048!5.55e-12!430;CL:0000723!9.60e-12!436;CL:0000990!2.05e-11!8;CL:0000945!1.97e-09!24;CL:0000826!1.97e-09!24;CL:0000840!1.92e-08!5;CL:0001029!1.92e-08!5;CL:0000791!1.04e-07!18;CL:0000789!1.04e-07!18;CL:0002420!1.04e-07!18;CL:0002419!1.04e-07!18;CL:0000790!1.04e-07!18;CL:0000094!3.20e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000473;6.09e-20;39!CL:0000234;6.09e-20;39!CL:0000860;2.28e-16;33!CL:0002057;2.28e-16;33!CL:0000766;9.97e-16;69!CL:0000840;3.06e-15;5!CL:0000451;3.09e-15;10!CL:0000990;4.55e-14;8!CL:0000775;1.37e-12;3!CL:0000738;2.14e-12;136!CL:0000576;5.64e-12;48!CL:0000763;1.00e-10;100!CL:0000235;4.91e-10;6!CL:0000988;8.37e-09;177!CL:0002087;1.83e-08;104!CL:0000094;4.36e-08;8 | |ontology_enrichment_celltype_v019=CL:0000473;6.09e-20;39!CL:0000234;6.09e-20;39!CL:0000860;2.28e-16;33!CL:0002057;2.28e-16;33!CL:0000766;9.97e-16;69!CL:0000840;3.06e-15;5!CL:0000451;3.09e-15;10!CL:0000990;4.55e-14;8!CL:0000775;1.37e-12;3!CL:0000738;2.14e-12;136!CL:0000576;5.64e-12;48!CL:0000763;1.00e-10;100!CL:0000235;4.91e-10;6!CL:0000988;8.37e-09;177!CL:0002087;1.83e-08;104!CL:0000094;4.36e-08;8 | ||
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|ontology_enrichment_development_v019=CL:0002057;3.70e-15;42!CL:0000049;1.92e-09;108 | |ontology_enrichment_development_v019=CL:0002057;3.70e-15;42!CL:0000049;1.92e-09;108 | ||
|ontology_enrichment_disease=DOID:2531!4.44e-17!51;DOID:0060083!4.44e-17!51;DOID:1240!8.85e-11!39;DOID:0060058!4.98e-10!10 | |ontology_enrichment_disease=DOID:2531!4.44e-17!51;DOID:0060083!4.44e-17!51;DOID:1240!8.85e-11!39;DOID:0060058!4.98e-10!10 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.08e-07,51;DOID:0060083,2.08e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.16e-35!102;UBERON:0003061!8.16e-35!102;UBERON:0002193!7.83e-32!112;UBERON:0002371!5.30e-27!80;UBERON:0001474!6.91e-24!86;UBERON:0002405!1.71e-20!115;UBERON:0002384!5.79e-20!375;UBERON:0004765!1.20e-18!101;UBERON:0001434!1.20e-18!101;UBERON:0003081!1.15e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!8.16e-35!102;UBERON:0003061!8.16e-35!102;UBERON:0002193!7.83e-32!112;UBERON:0002371!5.30e-27!80;UBERON:0001474!6.91e-24!86;UBERON:0002405!1.71e-20!115;UBERON:0002384!5.79e-20!375;UBERON:0004765!1.20e-18!101;UBERON:0001434!1.20e-18!101;UBERON:0003081!1.15e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.65e-27,76;UBERON:0002390,5.79e-25,98;UBERON:0003061,5.79e-25,98;UBERON:0001474,1.59e-24,82;UBERON:0002405,1.00e-22,93;UBERON:0002193,5.57e-22,108;UBERON:0004765,9.12e-22,90;UBERON:0001434,6.14e-19,100;UBERON:0002384,2.33e-15,371;UBERON:0002204,8.37e-09,167;UBERON:0003081,2.12e-08,203 | |||
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|short_description=p15@LCP1 | |short_description=p15@LCP1 | ||
}} | }} |
Latest revision as of 13:38, 17 September 2015
Short description: | p15@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_LCP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -22bp_to_CU679665, DQ892935, DQ896184_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.65e-27 | 76 |
hematopoietic system | 5.79e-25 | 98 |
blood island | 5.79e-25 | 98 |
bone element | 1.59e-24 | 82 |
immune system | 1.00e-22 | 93 |
hemolymphoid system | 5.57e-22 | 108 |
skeletal element | 9.12e-22 | 90 |
skeletal system | 6.14e-19 | 100 |
connective tissue | 2.33e-15 | 371 |
musculoskeletal system | 8.37e-09 | 167 |
lateral plate mesoderm | 2.12e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.08e-07 | 51 |
immune system cancer | 2.08e-07 | 51 |