FFCP PHASE1:Hg19::chr13:46742616..46742623,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:46742616..46742623,-
|short_description=p27@LCP1
|description=CAGE_peak_27_at_LCP1_5end
|association_with_transcript=30bp_to_ENST00000416500_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBN3 | |UniProt=Q5TBN3 | ||
|association_with_transcript=30bp_to_ENST00000416500_5end | |||
|cluster_id=chr13:46742616..46742623,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_27_at_LCP1_5end | |||
|id=chr13:46742616..46742623,- | |||
|ontology_enrichment_celltype=CL:0000738!1.93e-70!140;CL:0000988!4.94e-58!182;CL:0000037!4.01e-56!172;CL:0000566!4.01e-56!172;CL:0000766!2.41e-53!76;CL:0002032!2.79e-51!165;CL:0000837!2.79e-51!165;CL:0002057!1.00e-50!42;CL:0002087!9.17e-47!119;CL:0000860!1.01e-46!45;CL:0002031!1.34e-44!124;CL:0000763!1.66e-44!112;CL:0000049!1.66e-44!112;CL:0000557!2.09e-43!71;CL:0002009!3.37e-43!65;CL:0002194!2.91e-39!63;CL:0000576!2.91e-39!63;CL:0000040!2.91e-39!63;CL:0000559!2.91e-39!63;CL:0000839!7.52e-39!70;CL:0000134!6.81e-21!358;CL:0002320!3.67e-20!365;CL:0002393!3.31e-18!9;CL:0002397!3.31e-18!9;CL:0000219!1.38e-17!390;CL:0000094!1.70e-16!8;CL:0000081!4.24e-15!11;CL:0000080!8.64e-15!6;CL:0000048!1.64e-14!430;CL:0000034!2.79e-14!444;CL:0000453!3.93e-14!5;CL:0000723!4.48e-14!436;CL:0000451!5.32e-11!10;CL:0000990!2.57e-10!8;CL:0000767!6.80e-09!3;CL:0000623!1.47e-08!3;CL:0000825!1.47e-08!3;CL:0002371!4.98e-08!591;CL:0000842!5.15e-08!3;CL:0000144!9.29e-08!625;CL:0000063!1.69e-07!578;CL:0000542!1.72e-07!53;CL:0000051!1.72e-07!53;CL:0000771!8.22e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.70e-32;5!CL:0000094;2.42e-28;8!CL:0000081;1.74e-27;11!CL:0002393;3.40e-27;6!CL:0002397;3.40e-27;6!CL:0000990;1.14e-17;8!CL:0000766;1.21e-17;69!CL:0000860;1.02e-15;33!CL:0002057;1.02e-15;33!CL:0000576;7.15e-15;48!CL:0000451;2.00e-14;10!CL:0000771;3.28e-14;2!CL:0001014;5.00e-14;2!CL:0001016;5.00e-14;2!CL:0000473;2.37e-10;39!CL:0000234;2.37e-10;39!CL:0002087;9.95e-10;104!CL:0000738;1.54e-09;136!CL:0000775;1.66e-09;3!CL:0000767;2.75e-09;3!CL:0000623;4.53e-09;3!CL:0000763;1.41e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.03e-36,136;CL:0000763,1.78e-34,108;CL:0000049,1.78e-34,108;CL:0000766,4.75e-34,72;CL:0000453,7.40e-32,5;CL:0000860,1.07e-30,42;CL:0002057,1.07e-30,42;CL:0000988,8.63e-29,177;CL:0000094,1.31e-28,8;CL:0000037,2.16e-28,168;CL:0000081,9.96e-28,11;CL:0002032,1.27e-27,161;CL:0000837,1.27e-27,161;CL:0000473,1.75e-26,48;CL:0000234,1.75e-26,48;CL:0002009,6.19e-26,61;CL:0000557,2.45e-23,67;CL:0002194,1.41e-20,59;CL:0000576,1.41e-20,59;CL:0000040,1.41e-20,59;CL:0000559,1.41e-20,59;CL:0002393,3.79e-18,9;CL:0002397,3.79e-18,9;CL:0000839,4.13e-18,66;CL:0000990,1.20e-17,8;CL:0002031,1.28e-16,120;CL:0002087,1.63e-15,115;CL:0000451,2.09e-14,10;CL:0000771,3.28e-14,2;CL:0001014,6.28e-14,2;CL:0001016,6.28e-14,2;CL:0000134,1.11e-10,354;CL:0002320,2.30e-10,361;CL:0000775,1.40e-09,3;CL:0000767,1.89e-09,3;CL:0000219,2.94e-09,386;CL:0000623,5.80e-09,3;CL:0000825,5.80e-09,3;CL:0000034,2.74e-08,441;CL:0000048,6.71e-08,427;CL:0000723,1.03e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;8.41e-21;42!CL:0000049;3.93e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.04e-07;1!DOID:0060061;2.04e-07;1!DOID:8691;2.04e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.63e-07,1;DOID:0060061,2.63e-07,1;DOID:8691,2.63e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.24e-40!102;UBERON:0003061!5.24e-40!102;UBERON:0002371!2.49e-37!80;UBERON:0002193!2.50e-35!112;UBERON:0001474!5.54e-34!86;UBERON:0004765!2.34e-27!101;UBERON:0001434!2.34e-27!101;UBERON:0002405!4.18e-24!115;UBERON:0002384!3.64e-19!375;UBERON:0003081!2.60e-13!216;UBERON:0002204!1.72e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-20,76;UBERON:0002390,4.86e-19,98;UBERON:0003061,4.86e-19,98;UBERON:0001474,1.73e-18,82;UBERON:0002193,6.19e-17,108;UBERON:0004765,1.48e-16,90;UBERON:0002405,6.46e-16,93;UBERON:0001434,1.43e-14,100;UBERON:0002384,6.16e-10,371;UBERON:0002204,2.14e-07,167;UBERON:0003081,2.94e-07,203 | |||
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| ||
|short_description=p27@LCP1 | |||
}} | }} |
Latest revision as of 13:39, 17 September 2015
Short description: | p27@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_LCP1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 30bp_to_ENST00000416500_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | Q5TBN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.35e-20 | 76 |
hematopoietic system | 4.86e-19 | 98 |
blood island | 4.86e-19 | 98 |
bone element | 1.73e-18 | 82 |
hemolymphoid system | 6.19e-17 | 108 |
skeletal element | 1.48e-16 | 90 |
immune system | 6.46e-16 | 93 |
skeletal system | 1.43e-14 | 100 |
connective tissue | 6.16e-10 | 371 |
musculoskeletal system | 2.14e-07 | 167 |
lateral plate mesoderm | 2.94e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.63e-07 | 1 |
cutaneous T cell lymphoma | 2.63e-07 | 1 |
mycosis fungoides | 2.63e-07 | 1 |