FFCP PHASE1:Hg19::chr11:31832549..31832562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=30bp_to_ENST00000379111,uc001mte.3_5end | |association_with_transcript=30bp_to_ENST00000379111,uc001mte.3_5end | ||
|cluster_id=chr11:31832549..31832562,- | |||
|description=CAGE_peak_10_at_PAX6_5end | |description=CAGE_peak_10_at_PAX6_5end | ||
|id=chr11:31832549..31832562,- | |id=chr11:31832549..31832562,- | ||
|ontology_enrichment_celltype=CL:0000128!2.45e-12!7;CL:0000126!2.45e-12!7;CL:0000127!2.45e-12!7;CL:0002453!2.45e-12!7;CL:0002319!1.29e-10!25;CL:0000133!2.15e-08!59;CL:0000221!7.90e-08!71;CL:0000064!2.21e-07!3;CL:0005012!2.21e-07!3;CL:0000067!2.21e-07!3;CL:0002304!2.21e-07!3 | |ontology_enrichment_celltype=CL:0000128!2.45e-12!7;CL:0000126!2.45e-12!7;CL:0000127!2.45e-12!7;CL:0002453!2.45e-12!7;CL:0002319!1.29e-10!25;CL:0000133!2.15e-08!59;CL:0000221!7.90e-08!71;CL:0000064!2.21e-07!3;CL:0005012!2.21e-07!3;CL:0000067!2.21e-07!3;CL:0002304!2.21e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000064;3.49e-20;3!CL:0000067;3.49e-20;3!CL:0005012;3.49e-20;3!CL:0002304;3.49e-20;3!CL:0000306;4.95e-15;4!CL:0002222;4.95e-15;4!CL:0002224;4.95e-15;4!CL:0000047;2.01e-14;2!CL:0000075;4.11e-08;27!CL:0000342;5.51e-08;1!CL:0002565;5.51e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.88e-20,3;CL:0000067,1.88e-20,3;CL:0005012,1.88e-20,3;CL:0002304,1.88e-20,3;CL:0000306,4.61e-15,4;CL:0002222,4.61e-15,4;CL:0002224,4.61e-15,4;CL:0000075,3.55e-08,27;CL:0000047,4.43e-08,8;CL:0000342,6.52e-08,1;CL:0002565,6.52e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.66e-19;3!UBERON:0005425;1.22e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.22e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.35e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003075!2.42e-33!86;UBERON:0007284!2.42e-33!86;UBERON:0002346!2.95e-31!90;UBERON:0000073!1.10e-27!94;UBERON:0001016!1.10e-27!94;UBERON:0005743!4.62e-27!86;UBERON:0001049!4.94e-27!57;UBERON:0005068!4.94e-27!57;UBERON:0006241!4.94e-27!57;UBERON:0007135!4.94e-27!57;UBERON:0003056!2.77e-24!61;UBERON:0001017!4.53e-24!82;UBERON:0002616!6.09e-24!59;UBERON:0004732!8.47e-22!13;UBERON:0000955!5.02e-20!69;UBERON:0006238!5.02e-20!69;UBERON:0004733!5.42e-20!12;UBERON:0002028!5.42e-20!12;UBERON:0007277!5.42e-20!12;UBERON:0000033!5.88e-20!123;UBERON:0004121!3.91e-19!169;UBERON:0000153!1.97e-18!129;UBERON:0007811!1.97e-18!129;UBERON:0000924!2.40e-18!173;UBERON:0006601!2.40e-18!173;UBERON:0003076!2.81e-18!15;UBERON:0003057!2.81e-18!15;UBERON:0002104!2.41e-16!21;UBERON:0002680!1.75e-15!9;UBERON:0001895!1.75e-15!9;UBERON:0010092!1.75e-15!9;UBERON:0000970!8.65e-15!20;UBERON:0007625!2.64e-14!11;UBERON:0002020!6.85e-14!34;UBERON:0003528!6.85e-14!34;UBERON:0001032!8.61e-14!24;UBERON:0004456!8.61e-14!24;UBERON:0002780!1.77e-13!41;UBERON:0001890!1.77e-13!41;UBERON:0006240!1.77e-13!41;UBERON:0000019!2.86e-13!19;UBERON:0000047!2.86e-13!19;UBERON:0004088!2.86e-13!19;UBERON:0003072!2.86e-13!19;UBERON:0003071!2.86e-13!19;UBERON:0004128!2.86e-13!19;UBERON:0003080!4.95e-13!42;UBERON:0002791!7.76e-13!33;UBERON:0000956!1.89e-12!25;UBERON:0000203!1.89e-12!25;UBERON:0000020!2.21e-12!23;UBERON:0001893!2.48e-12!34;UBERON:0001456!1.08e-11!21;UBERON:0002037!1.19e-11!6;UBERON:0006215!1.19e-11!6;UBERON:0000063!2.69e-11!97;UBERON:0001801!7.71e-11!14;UBERON:0001869!2.12e-10!32;UBERON:0002298!9.09e-10!8;UBERON:0000064!1.33e-09!219;UBERON:0000488!2.79e-09!4;UBERON:0002619!8.51e-09!22;UBERON:0001950!3.93e-08!20;UBERON:0005085!1.31e-07!29;UBERON:0001778!2.21e-07!3;UBERON:0001775!2.21e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002104;8.40e-29;21!UBERON:0001801;2.35e-28;14!UBERON:0007625;4.85e-28;11!UBERON:0000488;2.02e-26;4!UBERON:0001032;5.41e-25;24!UBERON:0004456;5.41e-25;24!UBERON:0000970;1.31e-24;20!UBERON:0000020;3.23e-21;23!UBERON:0000019;1.31e-20;19!UBERON:0000047;1.31e-20;19!UBERON:0004088;1.31e-20;19!UBERON:0010230;1.31e-20;19!UBERON:0001778;3.49e-20;3!UBERON:0001775;3.49e-20;3!UBERON:0001456;1.54e-18;21!UBERON:0002203;1.07e-17;6!UBERON:0001768;1.07e-17;6!UBERON:0002200;1.07e-17;6!UBERON:0010077;4.95e-15;4!UBERON:0005389;4.95e-15;4!UBERON:0000484;4.95e-15;4!UBERON:0000965;4.95e-15;4!UBERON:0001803;4.95e-15;4!UBERON:0004732;5.63e-12;13!UBERON:0002037;4.93e-10;6!UBERON:0006876;1.01e-09;11!UBERON:0010371;2.84e-09;31!UBERON:0004733;1.34e-08;12!UBERON:0002028;1.34e-08;12!UBERON:0002506;5.51e-08;1!UBERON:0001769;5.51e-08;1!UBERON:0000941;1.22e-07;1!UBERON:0001785;1.22e-07;1!UBERON:0002464;1.22e-07;1!UBERON:0004904;1.22e-07;1!UBERON:0001021;1.22e-07;1!UBERON:0002680;7.64e-07;9!UBERON:0001895;7.64e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.47e-29,21;UBERON:0002104,7.47e-29,21;UBERON:0001801,2.04e-28,14;UBERON:0007625,3.44e-28,11;UBERON:0000488,1.28e-26,4;UBERON:0000020,4.88e-25,24;UBERON:0001032,4.88e-25,24;UBERON:0004456,4.88e-25,24;UBERON:0000019,1.16e-24,20;UBERON:0000047,1.16e-24,20;UBERON:0010312,1.16e-24,20;UBERON:0004088,1.16e-24,20;UBERON:0010230,1.16e-24,20;UBERON:0003072,1.16e-24,20;UBERON:0004128,1.16e-24,20;UBERON:0003071,1.16e-24,20;UBERON:0001456,2.71e-22,22;UBERON:0001778,1.88e-20,3;UBERON:0001775,1.88e-20,3;UBERON:0002203,7.93e-18,6;UBERON:0001768,7.93e-18,6;UBERON:0002200,7.93e-18,6;UBERON:0003075,1.88e-16,82;UBERON:0007284,1.88e-16,82;UBERON:0002346,1.50e-15,86;UBERON:0005085,2.06e-15,31;UBERON:0010077,4.61e-15,4;UBERON:0005389,4.61e-15,4;UBERON:0000484,4.61e-15,4;UBERON:0002546,4.61e-15,4;UBERON:0000965,4.61e-15,4;UBERON:0001803,4.61e-15,4;UBERON:0003073,4.61e-15,4;UBERON:0005426,4.61e-15,4;UBERON:0003056,1.34e-12,61;UBERON:0010371,2.43e-12,104;UBERON:0004732,4.39e-12,13;UBERON:0002037,3.33e-10,6;UBERON:0006215,3.33e-10,6;UBERON:0006876,8.58e-10,11;UBERON:0004121,1.66e-09,171;UBERON:0000924,1.66e-09,171;UBERON:0006601,1.66e-09,171;UBERON:0001444,3.15e-09,49;UBERON:0010314,4.41e-09,132;UBERON:0004733,1.09e-08,12;UBERON:0002028,1.09e-08,12;UBERON:0007277,1.09e-08,12;UBERON:0002506,6.52e-08,1;UBERON:0001769,6.52e-08,1;UBERON:0000033,6.72e-08,56;UBERON:0000076,8.83e-08,8;UBERON:0000941,1.18e-07,1;UBERON:0001785,1.18e-07,1;UBERON:0002464,1.18e-07,1;UBERON:0004904,1.18e-07,1;UBERON:0001021,1.18e-07,1;UBERON:0003902,1.18e-07,1;UBERON:0005425,1.18e-07,1;UBERON:0000153,5.32e-07,62;UBERON:0007811,5.32e-07,62;UBERON:0003076,5.69e-07,15;UBERON:0003057,5.69e-07,15;UBERON:0002680,5.91e-07,9;UBERON:0001895,5.91e-07,9;UBERON:0010092,5.91e-07,9 | |||
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| ||
|short_description=p10@PAX6 | |short_description=p10@PAX6 | ||
}} | }} |
Latest revision as of 14:55, 17 September 2015
Short description: | p10@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PAX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.88e-20 | 3 |
ciliated epithelial cell | 1.88e-20 | 3 |
multi-ciliated epithelial cell | 1.88e-20 | 3 |
non-pigmented ciliary epithelial cell | 1.88e-20 | 3 |
crystallin accumulating cell | 4.61e-15 | 4 |
vertebrate lens cell | 4.61e-15 | 4 |
lens epithelial cell | 4.61e-15 | 4 |
columnar/cuboidal epithelial cell | 3.55e-08 | 27 |
neuronal stem cell | 4.43e-08 | 8 |
pigment cell (sensu Vertebrata) | 6.52e-08 | 1 |
iris pigment epithelial cell | 6.52e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.35e-07 | 1 |