FFCP PHASE1:Hg19::chr11:31832807..31832823,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000241001_5end | |association_with_transcript=-22bp_to_ENST00000241001_5end | ||
|cluster_id=chr11:31832807..31832823,- | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_4_at_PAX6_5end | |description=CAGE_peak_4_at_PAX6_5end | ||
|id=chr11:31832807..31832823,- | |id=chr11:31832807..31832823,- | ||
|ontology_enrichment_celltype=CL:0002319!1.26e-08!25;CL:0000128!2.20e-07!7;CL:0000126!2.20e-07!7;CL:0000127!2.20e-07!7;CL:0002453!2.20e-07!7 | |ontology_enrichment_celltype=CL:0002319!1.26e-08!25;CL:0000128!2.20e-07!7;CL:0000126!2.20e-07!7;CL:0000127!2.20e-07!7;CL:0002453!2.20e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000128;8.26e-08;7!CL:0000126;8.26e-08;7!CL:0000127;8.26e-08;7!CL:0002319;1.11e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,7.63e-08,7;CL:0000126,7.63e-08,7;CL:0000127,7.63e-08,7;CL:0002453,7.63e-08,7;CL:0002319,1.06e-07,25;CL:0000133,2.99e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.47e-11;82 | |||
|ontology_enrichment_disease=DOID:0050687!7.97e-10!143;DOID:14566!8.00e-07!239;DOID:162!9.93e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;8.60e-43;32!UBERON:0002791;9.17e-43;32!UBERON:0003528;1.51e-42;34!UBERON:0002020;1.51e-42;34!UBERON:0001893;3.90e-42;34!UBERON:0002780;4.39e-40;41!UBERON:0001890;4.39e-40;41!UBERON:0000956;1.16e-37;25!UBERON:0000203;1.16e-37;25!UBERON:0000073;2.65e-36;53!UBERON:0002616;2.65e-36;53!UBERON:0002619;1.03e-32;22!UBERON:0001950;1.43e-29;20!UBERON:0001017;1.95e-24;75!UBERON:0000955;1.99e-24;68!UBERON:0001016;2.19e-22;83!UBERON:0002420;1.82e-13;9!UBERON:0007245;1.82e-13;9!UBERON:0010009;1.82e-13;9!UBERON:0010011;1.82e-13;9!UBERON:0000454;1.82e-13;9!UBERON:0002104;2.68e-13;21!UBERON:0000125;7.07e-13;9!UBERON:0002308;7.07e-13;9!UBERON:0007625;7.46e-13;11!UBERON:0004732;1.80e-12;13!UBERON:0000970;2.17e-12;20!UBERON:0004733;1.62e-11;12!UBERON:0002028;1.62e-11;12!UBERON:0001032;4.02e-11;24!UBERON:0004456;4.02e-11;24!UBERON:0000019;4.48e-11;19!UBERON:0000047;4.48e-11;19!UBERON:0004088;4.48e-11;19!UBERON:0010230;4.48e-11;19!UBERON:0001871;6.09e-11;6!UBERON:0009663;1.35e-10;7!UBERON:0000020;2.78e-10;23!UBERON:0001456;1.06e-09;21!UBERON:0001801;1.94e-09;14!UBERON:0000200;2.09e-09;6!UBERON:0010314;4.45e-09;132!UBERON:0000349;9.08e-09;5!UBERON:0002021;1.38e-08;5!UBERON:0011216;1.70e-08;132!UBERON:0002680;4.42e-08;9!UBERON:0001895;4.42e-08;9!UBERON:0001872;6.30e-08;5!UBERON:0007023;1.40e-07;114!UBERON:0001894;1.62e-07;7!UBERON:0000488;2.69e-07;4!UBERON:0000369;4.83e-07;4!UBERON:0002435;4.83e-07;4!UBERON:0000204;4.83e-07;4!UBERON:0002037;5.57e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,8.60e-73,82;UBERON:0007284,8.60e-73,82;UBERON:0002346,1.12e-70,86;UBERON:0001049,6.19e-70,56;UBERON:0005068,6.19e-70,56;UBERON:0006241,6.19e-70,56;UBERON:0007135,6.19e-70,56;UBERON:0000073,1.35e-65,53;UBERON:0002616,1.35e-65,53;UBERON:0003056,1.19e-64,61;UBERON:0001017,2.85e-64,81;UBERON:0001016,3.23e-64,89;UBERON:0010371,3.64e-57,104;UBERON:0000955,3.14e-55,68;UBERON:0006238,3.14e-55,68;UBERON:0002780,3.23e-55,41;UBERON:0001890,3.23e-55,41;UBERON:0003080,3.23e-55,41;UBERON:0006240,3.23e-55,41;UBERON:0003528,3.83e-49,34;UBERON:0002020,3.83e-49,34;UBERON:0001893,3.90e-49,34;UBERON:0001869,5.49e-47,32;UBERON:0002791,7.68e-47,32;UBERON:0004121,1.35e-43,171;UBERON:0000924,1.35e-43,171;UBERON:0006601,1.35e-43,171;UBERON:0010314,1.69e-41,132;UBERON:0000956,9.61e-38,25;UBERON:0000203,9.61e-38,25;UBERON:0002619,8.46e-33,22;UBERON:0001950,1.24e-29,20;UBERON:0011216,8.72e-23,223;UBERON:0007023,9.39e-21,114;UBERON:0003076,2.30e-15,15;UBERON:0003057,2.30e-15,15;UBERON:0002420,2.36e-13,9;UBERON:0007245,2.36e-13,9;UBERON:0010009,2.36e-13,9;UBERON:0010011,2.36e-13,9;UBERON:0000454,2.36e-13,9;UBERON:0000970,3.26e-13,21;UBERON:0002104,3.26e-13,21;UBERON:0007625,5.83e-13,11;UBERON:0000125,1.20e-12,9;UBERON:0002308,1.20e-12,9;UBERON:0004732,1.96e-12,13;UBERON:0000025,2.04e-12,192;UBERON:0000483,3.53e-12,306;UBERON:0000019,6.82e-12,20;UBERON:0000047,6.82e-12,20;UBERON:0010312,6.82e-12,20;UBERON:0004088,6.82e-12,20;UBERON:0010230,6.82e-12,20;UBERON:0003072,6.82e-12,20;UBERON:0004128,6.82e-12,20;UBERON:0003071,6.82e-12,20;UBERON:0000119,7.30e-12,309;UBERON:0004733,1.72e-11,12;UBERON:0002028,1.72e-11,12;UBERON:0007277,1.72e-11,12;UBERON:0000020,4.73e-11,24;UBERON:0001032,4.73e-11,24;UBERON:0004456,4.73e-11,24;UBERON:0001871,5.66e-11,6;UBERON:0001456,1.77e-10,22;UBERON:0009663,1.91e-10,7;UBERON:0000200,1.81e-09,6;UBERON:0001801,2.62e-09,14;UBERON:0000349,7.95e-09,5;UBERON:0002021,1.49e-08,5;UBERON:0001872,5.39e-08,5;UBERON:0002680,5.52e-08,9;UBERON:0001895,5.52e-08,9;UBERON:0010092,5.52e-08,9;UBERON:0004111,6.71e-08,240;UBERON:0001894,1.32e-07,7;UBERON:0006222,1.32e-07,7;UBERON:0000488,2.37e-07,4;UBERON:0000369,5.21e-07,4;UBERON:0002435,5.21e-07,4;UBERON:0000204,5.21e-07,4;UBERON:0010082,5.21e-07,4;UBERON:0002037,6.12e-07,6;UBERON:0006215,6.12e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984968464614303,1.63200552995402,1.25381888591235,10.8769675109802,12.4555726816325,16.4460857869192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,9.83162098506306,5.98669373148923,7.37812199822259,0.261958150995425,1.09288586487763,1.11235332835329,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,1.09776335516636,0.397589304964456,2.20768491452085,8.70752862129112,3.28017106138317,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97546649865724,0,0,0,0,0,0,1.44331342025273,11.7089709024828,3.40485213283883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.229298956458,6.50699269288109,13.1459098172208,5.02548796003046,12.7587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,2.29610251989794,1.95227036798582,0,0.457847324091717,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,6.12600539952579,0,0,0,0.637705090915289,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7704878737255,0,0,0,0.935702702041099,0,0,0,6.81926752335391,0,0,0,5.96488588659779,9.84685914873589,1.11308705022906,0.16480387422676,0.63337622438398,0.19924798825107,0,18.8949560890707,1.84083628503879,0,0,0,0,0,0,0,0,3.87733098438087,2.13366625772258,1.99613798001194,0,0,0,0,0,0.236387681767936,6.20538071834636,0,22.9184993311946,11.5146380155799,5.18564686089254,39.6712514424416,42.0201187738654,12.1174523770954,5.92340572315726,0.435753854075961,0,0,0,0,0.628303510868405,2.39024218228418,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0.167821586975843,1.89753732724185,0,0.632994193584081,0,0,0.432777279484182,0.995261931078505,0.0884575645033392,0,6.52346483097368,2.22415090103705,2.19286093961456,2.89824871816911,0,2.34264445725339,0,0.391329237864179,0.242780379534093,0,3.62972148145992,3.67287313956588,0,2.55549813004637,2.79958116772567,0,0,0,0,0,0,0.694238953340524,0,0,0,2.23581842213102,0.774050650312681,1.90032224424082,0.574808199372465,0,0,11.2990370390266,0,0.794858446811959,3.16553979779394,0.586654148204409,0,0,0,0.144090417154106,13.9734647322417,0.857974989309823,0.576219191952599,1.24252535565433,0,0,0,0,0,5.4037825983881,3.55953985119182,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0.13480708770837,1.27955725969173,0,8.74752658790234,12.8031201744881,0,0.137539436597234,0,0,0,2.61223093629506,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,3.59190574687462,0.082092520749339,0,0.113312091520126,0,0,2.19781025814636,2.24795422962573,0,0,0,0,0,0,0,9.0126522801863,0,0,0,0,0,0,6.2024772597689,7.80968095372564,9.38931980298749,2.29363678276028,8.09782076219022,1.98708489412427,0.415045904808692,0,0,0,0,16.8600566090477,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,2.60994291965212,0,0.926089897295336,0,0,0,0,1.94358060540469,0,1.01365464391844,0.512483037175893,0.690860683462397,0.303859956177382,9.12505678601423,0,0,0,1.31043939538565,0,0,0,1.8137594048004,0,0,1.47284760201473,0,0,0,1.1860729253635,2.35898912783845,0,0,2.12574920101683,0.867550349813015,10.6142534414916,0,0,0,0,0,2.31225210347254,5.6678630530234,10.8551024158863,3.69209455633359,12.6035848110859,2.21303207885497,5.97459888837849,1.42769420259154,0,0.943757786781923,0,0,0,1.3807198521202,0,0,0.20170506870352,1.56302802246618,0,0,0,1.75597720007826,7.81078098613847,9.71427943555565,1.64881106504158,7.11067251723685,0,0,0.703484977438482,0.255524855279191,4.82131652290458,3.69912094440706,1.82089681270989,3.87025725297206,0,0,0,0.40781839786099,1.71009211263408,0.354581522651905,1.00108261702862,0,4.39923651764805,0,0,1.72742072974897,0,10.0781927289085,0,0.23248285073625,9.73606324894445,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0.935757853848423,10.9422926338753,71.7088147388738,2.37186772281816,1.20934568419972,0,0,0.437119121007915,0,0,1.17838273550813,6.87079634902308,5.64388160621463,2.9585900930838,0,0,0,0,0,0.352894871715692,0,0,0,1.14671666521161,2.68211655728414,1.49581278420012,9.16336449714793,4.2322147241232,0,0,0,1.89249637252618,0.109265571963696,0.760191006068622,0.101988829741982,2.40495664739004,0.0918948995348449,0,0,0.2679641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| ||
|short_description=p4@PAX6 | |short_description=p4@PAX6 | ||
}} | }} |
Latest revision as of 15:00, 17 September 2015
Short description: | p4@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | -22bp_to_ENST00000241001_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 7.63e-08 | 7 |
macroglial cell | 7.63e-08 | 7 |
astrocyte | 7.63e-08 | 7 |
oligodendrocyte precursor cell | 7.63e-08 | 7 |
neural cell | 1.06e-07 | 25 |
neurectodermal cell | 2.99e-07 | 59 |