FFCP PHASE1:Hg19::chr17:74557133..74557167,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:74557133..74557167,+
|short_description=p1@SNORD1B
|description=CAGE_peak_1_at_SNORD1B_5end
|association_with_transcript=-22bp_to_NR_004396,uc010dgy.1_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=677849 | |EntrezGene=677849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32676 | |HGNC=32676 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_NR_004396,uc010dgy.1_5end | |||
|cluster_id=chr17:74557133..74557167,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_SNORD1B_5end | |||
|id=chr17:74557133..74557167,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.47e-43!140;CL:0002087!6.60e-38!119;CL:0002057!1.16e-32!42;CL:0002031!1.50e-32!124;CL:0000037!8.13e-32!172;CL:0000566!8.13e-32!172;CL:0002032!3.70e-31!165;CL:0000837!3.70e-31!165;CL:0000988!4.46e-30!182;CL:0000766!1.50e-29!76;CL:0000860!1.71e-29!45;CL:0002194!4.69e-24!63;CL:0000576!4.69e-24!63;CL:0000040!4.69e-24!63;CL:0000559!4.69e-24!63;CL:0002009!7.65e-23!65;CL:0000839!3.60e-21!70;CL:0000557!1.18e-20!71;CL:0000763!1.10e-18!112;CL:0000049!1.10e-18!112;CL:0000219!1.04e-13!390;CL:0000838!3.94e-12!52;CL:0000542!1.02e-11!53;CL:0000051!1.02e-11!53;CL:0000134!5.22e-11!358;CL:0002320!3.11e-10!365;CL:0000094!3.72e-10!8;CL:0000791!1.67e-08!18;CL:0000789!1.67e-08!18;CL:0002420!1.67e-08!18;CL:0002419!1.67e-08!18;CL:0000790!1.67e-08!18;CL:0000081!2.65e-08!11;CL:0000084!4.64e-07!25;CL:0000827!4.64e-07!25;CL:0000624!4.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-36;33!CL:0002057;1.35e-36;33!CL:0000473;2.68e-30;39!CL:0000234;2.68e-30;39!CL:0000576;4.79e-19;48!CL:0000766;1.04e-17;69!CL:0000094;9.80e-17;8!CL:0002087;2.97e-12;104!CL:0000081;7.39e-12;11!CL:0000775;9.31e-10;3!CL:0000763;9.56e-10;100!CL:0000148;1.20e-09;10!CL:0002567;5.19e-09;3!CL:0000623;7.21e-09;3!CL:0000738;2.50e-08;136!CL:0000624;2.64e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.57e-40,136;CL:0000766,2.04e-38,72;CL:0000860,3.91e-36,42;CL:0002057,3.91e-36,42;CL:0000473,4.44e-36,48;CL:0000234,4.44e-36,48;CL:0002087,4.40e-33,115;CL:0002032,4.68e-32,161;CL:0000837,4.68e-32,161;CL:0000037,1.02e-31,168;CL:0002194,1.67e-29,59;CL:0000576,1.67e-29,59;CL:0000040,1.67e-29,59;CL:0000559,1.67e-29,59;CL:0002031,1.69e-29,120;CL:0000988,1.94e-29,177;CL:0002009,2.70e-28,61;CL:0000763,1.15e-25,108;CL:0000049,1.15e-25,108;CL:0000839,1.36e-25,66;CL:0000557,4.22e-25,67;CL:0000094,7.21e-17,8;CL:0000219,9.26e-14,386;CL:0000081,5.95e-12,11;CL:0000134,1.37e-11,354;CL:0002320,4.17e-11,361;CL:0000775,9.47e-10,3;CL:0000148,9.97e-10,10;CL:0000541,9.97e-10,10;CL:0002567,4.35e-09,3;CL:0000623,6.40e-09,3;CL:0000825,6.40e-09,3;CL:0000048,2.28e-07,427;CL:0000034,3.20e-07,441;CL:0000624,3.53e-07,6;CL:0000723,4.34e-07,433;CL:0000838,8.47e-07,52;CL:0000147,9.94e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;7.59e-26;42!CL:0000049;2.28e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.70e-27!102;UBERON:0003061!5.70e-27!102;UBERON:0002193!1.53e-24!112;UBERON:0002371!1.42e-18!80;UBERON:0001474!3.91e-17!86;UBERON:0002405!2.04e-14!115;UBERON:0004765!6.82e-14!101;UBERON:0001434!6.82e-14!101;UBERON:0002384!6.66e-10!375;UBERON:0000178!5.67e-09!15;UBERON:0000179!5.67e-09!15;UBERON:0000463!5.67e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.78e-08;15!UBERON:0000179;5.78e-08;15!UBERON:0000463;5.78e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.07e-29,98;UBERON:0003061,6.07e-29,98;UBERON:0002193,2.34e-25,108;UBERON:0002371,2.96e-21,76;UBERON:0001474,3.67e-19,82;UBERON:0002405,6.41e-19,93;UBERON:0004765,8.27e-17,90;UBERON:0001434,1.27e-15,100;UBERON:0002384,1.90e-10,371;UBERON:0003081,3.99e-09,203;UBERON:0000178,5.76e-08,15;UBERON:0000179,5.76e-08,15;UBERON:0000463,5.76e-08,15 | |||
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| ||
|short_description=p1@SNORD1B | |||
}} | }} |
Latest revision as of 15:56, 17 September 2015
Short description: | p1@SNORD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNORD1B_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -22bp_to_NR_004396, uc010dgy.1_5end |
EntrezGene: | SNORD1B |
HGNC: | 32676 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.07e-29 | 98 |
blood island | 6.07e-29 | 98 |
hemolymphoid system | 2.34e-25 | 108 |
bone marrow | 2.96e-21 | 76 |
bone element | 3.67e-19 | 82 |
immune system | 6.41e-19 | 93 |
skeletal element | 8.27e-17 | 90 |
skeletal system | 1.27e-15 | 100 |
connective tissue | 1.90e-10 | 371 |
lateral plate mesoderm | 3.99e-09 | 203 |
blood | 5.76e-08 | 15 |
haemolymphatic fluid | 5.76e-08 | 15 |
organism substance | 5.76e-08 | 15 |