FFCP PHASE1:Hg19::chr15:42697065..42697078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |UniProt=Q9BQC8,P20807,A4FTZ9 | ||
|association_with_transcript=88bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |association_with_transcript=88bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | ||
|cluster_id=chr15:42697065..42697078,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_8_at_CAPN3_5end | |description=CAGE_peak_8_at_CAPN3_5end | ||
|id=chr15:42697065..42697078,+ | |id=chr15:42697065..42697078,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.09e-16!10;CL:0000541!1.09e-16!10;CL:0000147!3.05e-14!14;CL:0002567!1.66e-09!3;CL:0000710!1.56e-07!20 | |ontology_enrichment_celltype=CL:0000148!1.09e-16!10;CL:0000541!1.09e-16!10;CL:0000147!3.05e-14!14;CL:0002567!1.66e-09!3;CL:0000710!1.56e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.26e-18;10!CL:0000147;1.53e-16;14!CL:0002567;6.72e-13;3!CL:0000710;9.36e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.33e-18,10;CL:0000541,1.33e-18,10;CL:0000147,1.81e-16,14;CL:0002567,6.73e-13,3;CL:0000710,9.59e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.72e-19;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;8.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.87e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.26e-75!57;UBERON:0005068!9.26e-75!57;UBERON:0006241!9.26e-75!57;UBERON:0007135!9.26e-75!57;UBERON:0002616!2.89e-61!59;UBERON:0002780!1.23e-57!41;UBERON:0001890!1.23e-57!41;UBERON:0006240!1.23e-57!41;UBERON:0005743!1.46e-57!86;UBERON:0003080!4.58e-56!42;UBERON:0000955!7.78e-56!69;UBERON:0006238!7.78e-56!69;UBERON:0001017!1.22e-55!82;UBERON:0007023!1.46e-55!115;UBERON:0000073!2.13e-53!94;UBERON:0001016!2.13e-53!94;UBERON:0003075!7.73e-53!86;UBERON:0007284!7.73e-53!86;UBERON:0002346!6.25e-50!90;UBERON:0001893!8.27e-50!34;UBERON:0002020!9.50e-50!34;UBERON:0003528!9.50e-50!34;UBERON:0002791!1.53e-47!33;UBERON:0001869!5.39e-45!32;UBERON:0003056!8.55e-41!61;UBERON:0002619!1.14e-34!22;UBERON:0000033!3.56e-31!123;UBERON:0001950!1.32e-30!20;UBERON:0000956!4.84e-30!25;UBERON:0000203!4.84e-30!25;UBERON:0000153!3.65e-29!129;UBERON:0007811!3.65e-29!129;UBERON:0004121!5.85e-27!169;UBERON:0000924!4.97e-26!173;UBERON:0006601!4.97e-26!173;UBERON:0002308!2.43e-22!9;UBERON:0000125!2.43e-22!9;UBERON:0002420!1.26e-21!9;UBERON:0007245!1.26e-21!9;UBERON:0010009!1.26e-21!9;UBERON:0010011!1.26e-21!9;UBERON:0000454!1.26e-21!9;UBERON:0003076!6.99e-19!15;UBERON:0003057!6.99e-19!15;UBERON:0009663!1.37e-17!7;UBERON:0002298!5.61e-16!8;UBERON:0000025!1.45e-15!194;UBERON:0000200!9.30e-15!6;UBERON:0004732!1.17e-14!13;UBERON:0004733!1.05e-12!12;UBERON:0002028!1.05e-12!12;UBERON:0007277!1.05e-12!12;UBERON:0000349!3.12e-12!5;UBERON:0001871!1.64e-10!7;UBERON:0000369!2.37e-10!4;UBERON:0002435!2.37e-10!4;UBERON:0000204!2.37e-10!4;UBERON:0010082!2.37e-10!4;UBERON:0004111!2.71e-10!241;UBERON:0001894!4.19e-09!7;UBERON:0006222!4.19e-09!7;UBERON:0006331!5.82e-09!3;UBERON:0000483!5.88e-09!309;UBERON:0000988!5.97e-09!3;UBERON:0000119!9.39e-09!312;UBERON:0001896!1.11e-08!3;UBERON:0005290!1.11e-08!3;UBERON:0010096!1.11e-08!3;UBERON:0001872!1.22e-08!5;UBERON:0002240!1.40e-08!3;UBERON:0002021!1.95e-08!5;UBERON:0005383!5.68e-08!3;UBERON:0005382!5.68e-08!3;UBERON:0002771!6.27e-08!3;UBERON:0000475!9.03e-08!365;UBERON:0000477!1.47e-07!286;UBERON:0000064!2.99e-07!219;UBERON:0002680!5.91e-07!9;UBERON:0001895!5.91e-07!9;UBERON:0010092!5.91e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!9.26e-75!57;UBERON:0005068!9.26e-75!57;UBERON:0006241!9.26e-75!57;UBERON:0007135!9.26e-75!57;UBERON:0002616!2.89e-61!59;UBERON:0002780!1.23e-57!41;UBERON:0001890!1.23e-57!41;UBERON:0006240!1.23e-57!41;UBERON:0005743!1.46e-57!86;UBERON:0003080!4.58e-56!42;UBERON:0000955!7.78e-56!69;UBERON:0006238!7.78e-56!69;UBERON:0001017!1.22e-55!82;UBERON:0007023!1.46e-55!115;UBERON:0000073!2.13e-53!94;UBERON:0001016!2.13e-53!94;UBERON:0003075!7.73e-53!86;UBERON:0007284!7.73e-53!86;UBERON:0002346!6.25e-50!90;UBERON:0001893!8.27e-50!34;UBERON:0002020!9.50e-50!34;UBERON:0003528!9.50e-50!34;UBERON:0002791!1.53e-47!33;UBERON:0001869!5.39e-45!32;UBERON:0003056!8.55e-41!61;UBERON:0002619!1.14e-34!22;UBERON:0000033!3.56e-31!123;UBERON:0001950!1.32e-30!20;UBERON:0000956!4.84e-30!25;UBERON:0000203!4.84e-30!25;UBERON:0000153!3.65e-29!129;UBERON:0007811!3.65e-29!129;UBERON:0004121!5.85e-27!169;UBERON:0000924!4.97e-26!173;UBERON:0006601!4.97e-26!173;UBERON:0002308!2.43e-22!9;UBERON:0000125!2.43e-22!9;UBERON:0002420!1.26e-21!9;UBERON:0007245!1.26e-21!9;UBERON:0010009!1.26e-21!9;UBERON:0010011!1.26e-21!9;UBERON:0000454!1.26e-21!9;UBERON:0003076!6.99e-19!15;UBERON:0003057!6.99e-19!15;UBERON:0009663!1.37e-17!7;UBERON:0002298!5.61e-16!8;UBERON:0000025!1.45e-15!194;UBERON:0000200!9.30e-15!6;UBERON:0004732!1.17e-14!13;UBERON:0004733!1.05e-12!12;UBERON:0002028!1.05e-12!12;UBERON:0007277!1.05e-12!12;UBERON:0000349!3.12e-12!5;UBERON:0001871!1.64e-10!7;UBERON:0000369!2.37e-10!4;UBERON:0002435!2.37e-10!4;UBERON:0000204!2.37e-10!4;UBERON:0010082!2.37e-10!4;UBERON:0004111!2.71e-10!241;UBERON:0001894!4.19e-09!7;UBERON:0006222!4.19e-09!7;UBERON:0006331!5.82e-09!3;UBERON:0000483!5.88e-09!309;UBERON:0000988!5.97e-09!3;UBERON:0000119!9.39e-09!312;UBERON:0001896!1.11e-08!3;UBERON:0005290!1.11e-08!3;UBERON:0010096!1.11e-08!3;UBERON:0001872!1.22e-08!5;UBERON:0002240!1.40e-08!3;UBERON:0002021!1.95e-08!5;UBERON:0005383!5.68e-08!3;UBERON:0005382!5.68e-08!3;UBERON:0002771!6.27e-08!3;UBERON:0000475!9.03e-08!365;UBERON:0000477!1.47e-07!286;UBERON:0000064!2.99e-07!219;UBERON:0002680!5.91e-07!9;UBERON:0001895!5.91e-07!9;UBERON:0010092!5.91e-07!9 | ||
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|short_description=p8@CAPN3 | |short_description=p8@CAPN3 | ||
}} | }} |
Latest revision as of 16:04, 17 September 2015
Short description: | p8@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAPN3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 88bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.33e-18 | 10 |
melanoblast | 1.33e-18 | 10 |
pigment cell | 1.81e-16 | 14 |
light melanocyte | 6.73e-13 | 3 |
neurecto-epithelial cell | 9.59e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.87e-09 | 2 |